RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C MCM16Q12262 181 aa7.7□□□□□ -1.18
TVP38YKR088C UTP7P40055 554 aaKnown RBP7.69□□□□□ -1.18
TVP38YKR088C YNR014WP53719 212 aa7.68□□□□□ -1.18
TVP38YKR088C SUM1P46676 1062 aa7.66□□□□□ -1.18
TVP38YKR088C FPS1P23900 669 aa7.65□□□□□ -1.18
TVP38YKR088C YBL036CP38197 257 aa7.65□□□□□ -1.18
TVP38YKR088C GUA1P38625 525 aaKnown RBP7.65□□□□□ -1.18
TVP38YKR088C HAL5P38970 855 aaKnown RBP7.64□□□□□ -1.19
TVP38YKR088C ATG3P40344 310 aa7.64□□□□□ -1.19
TVP38YKR088C JJJ2P46997 583 aa7.64□□□□□ -1.19
TVP38YKR088C IRE1P32361 1115 aa7.63□□□□□ -1.19
TVP38YKR088C MCX1P38323 520 aaPredicted RBP7.63□□□□□ -1.19
TVP38YKR088C GPM1P00950 247 aaKnown RBP7.62□□□□□ -1.19
TVP38YKR088C YDJ1P25491 409 aaKnown RBP7.62□□□□□ -1.19
TVP38YKR088C SLX8P40072 274 aa7.61□□□□□ -1.19
TVP38YKR088C UTP13Q05946 817 aaKnown RBP7.61□□□□□ -1.19
TVP38YKR088C SOH1P38633 127 aa7.6□□□□□ -1.19
TVP38YKR088C BOI2P39969 1040 aa7.6□□□□□ -1.19
TVP38YKR088C YPP1P46951 817 aa7.59□□□□□ -1.19
TVP38YKR088C MET1P36150 593 aa7.58□□□□□ -1.2
TVP38YKR088C BRL1P38770 471 aa7.58□□□□□ -1.2
TVP38YKR088C HPC2Q01448 625 aa7.58□□□□□ -1.2
TVP38YKR088C HDA3Q06623 655 aa7.58□□□□□ -1.2
TVP38YKR088C MRPL16P38064 232 aa7.57□□□□□ -1.2
TVP38YKR088C SHM1P37292 490 aaPredicted RBP7.56□□□□□ -1.2
TVP38YKR088C YCK2P23292 546 aaKnown RBP7.55□□□□□ -1.2
TVP38YKR088C PDC6P26263 563 aaKnown RBP7.55□□□□□ -1.2
TVP38YKR088C PSH1Q12161 406 aa7.55□□□□□ -1.2
TVP38YKR088C STB3Q12427 513 aa7.54□□□□□ -1.2
TVP38YKR088C LEU3P08638 886 aa7.53□□□□□ -1.2
TVP38YKR088C KNS1P32350 737 aaPredicted RBP7.53□□□□□ -1.2
TVP38YKR088C RPN1P38764 993 aaKnown RBP7.53□□□□□ -1.2
TVP38YKR088C YDR215CQ12240 137 aa7.53□□□□□ -1.2
TVP38YKR088C PDC5P16467 563 aaKnown RBP7.51□□□□□ -1.21
TVP38YKR088C RQC2Q12532 1038 aaKnown RBP7.51□□□□□ -1.21
TVP38YKR088C SLN1P39928 1220 aaPredicted RBP7.5□□□□□ -1.21
TVP38YKR088C TFB3Q03290 321 aa7.5□□□□□ -1.21
TVP38YKR088C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
TVP38YKR088C TAT1P38085 619 aa7.49□□□□□ -1.21
TVP38YKR088C AMN1P38285 549 aaPredicted RBP7.49□□□□□ -1.21
TVP38YKR088C SPR3P41901 512 aa7.49□□□□□ -1.21
TVP38YKR088C RPP1AP05318 106 aaPredicted RBP7.48□□□□□ -1.21
TVP38YKR088C RPS31P05759 152 aaKnown RBP7.47□□□□□ -1.21
TVP38YKR088C BIO2P32451 375 aa7.47□□□□□ -1.21
TVP38YKR088C LSB6P42951 607 aa7.47□□□□□ -1.21
TVP38YKR088C TY1A-DR2Q03964 440 aaKnown RBP7.47□□□□□ -1.21
TVP38YKR088C YPQ2Q06328 317 aa7.47□□□□□ -1.21
TVP38YKR088C SWI5P08153 709 aa7.46□□□□□ -1.22
TVP38YKR088C SUP45P12385 437 aaKnown RBP7.46□□□□□ -1.22
TVP38YKR088C MCA1Q08601 432 aa7.46□□□□□ -1.22
TVP38YKR088C PKC1P24583 1151 aa7.45□□□□□ -1.22
TVP38YKR088C YNL108CP53929 270 aa7.45□□□□□ -1.22
TVP38YKR088C ENO2P00925 437 aaKnown RBP7.44□□□□□ -1.22
TVP38YKR088C LEU1P07264 779 aaKnown RBP7.44□□□□□ -1.22
TVP38YKR088C AIM9P40053 627 aaKnown RBP7.44□□□□□ -1.22
TVP38YKR088C YTA6P40328 754 aa7.43□□□□□ -1.22
TVP38YKR088C YFL034WP43564 1073 aa7.43□□□□□ -1.22
TVP38YKR088C SGS1P35187 1447 aa7.42□□□□□ -1.22
TVP38YKR088C RPS6AP0CX37 236 aaKnown RBP7.4□□□□□ -1.22
TVP38YKR088C RPS6BP0CX38 236 aaPredicted RBP7.4□□□□□ -1.22
TVP38YKR088C PRY1P47032 299 aa7.4□□□□□ -1.22
TVP38YKR088C RGP1P16664 663 aa7.39□□□□□ -1.23
TVP38YKR088C MAC1P35192 417 aa7.39□□□□□ -1.23
TVP38YKR088C RIM21P48565 533 aa7.39□□□□□ -1.23
TVP38YKR088C MCM1P11746 286 aa7.38□□□□□ -1.23
TVP38YKR088C MSC7P38694 644 aa7.38□□□□□ -1.23
TVP38YKR088C ALD2P47771 506 aa7.38□□□□□ -1.23
TVP38YKR088C YPL034WQ03083 165 aa7.37□□□□□ -1.23
TVP38YKR088C NTH2P35172 780 aa7.36□□□□□ -1.23
TVP38YKR088C YNL165WP53891 406 aa7.36□□□□□ -1.23
TVP38YKR088C RDS2P19541 446 aaKnown RBP7.35□□□□□ -1.23
TVP38YKR088C TPS3P38426 1054 aaKnown RBP7.35□□□□□ -1.23
TVP38YKR088C NHA1Q99271 985 aa7.35□□□□□ -1.23
TVP38YKR088C SPA2P23201 1466 aaKnown RBP7.35□□□□□ -1.23
TVP38YKR088C HEH2Q03281 663 aa7.34□□□□□ -1.23
TVP38YKR088C MLF3P32047 452 aa7.33□□□□□ -1.24
TVP38YKR088C ALG14P38242 237 aa7.32□□□□□ -1.24
TVP38YKR088C Q0182Q9ZZW1 134 aa7.32□□□□□ -1.24
TVP38YKR088C YJL007CP47080 104 aa7.31□□□□□ -1.24
TVP38YKR088C PDI1P17967 522 aaKnown RBP7.3□□□□□ -1.24
TVP38YKR088C PGM2P37012 569 aaKnown RBP7.3□□□□□ -1.24
TVP38YKR088C ALO1P54783 526 aaKnown RBP7.3□□□□□ -1.24
TVP38YKR088C TSC13Q99190 310 aa7.29□□□□□ -1.24
TVP38YKR088C MTO1P53070 669 aa7.28□□□□□ -1.24
TVP38YKR088C BUD9P53226 547 aa7.28□□□□□ -1.24
TVP38YKR088C CYT1P07143 309 aa7.26□□□□□ -1.25
TVP38YKR088C OMA1P36163 345 aa7.26□□□□□ -1.25
TVP38YKR088C NCL1P38205 684 aaKnown RBP7.26□□□□□ -1.25
TVP38YKR088C MRX10Q05648 414 aa7.26□□□□□ -1.25
TVP38YKR088C PRK1P40494 810 aa7.25□□□□□ -1.25
TVP38YKR088C SSN2P38931 1420 aa7.25□□□□□ -1.25
TVP38YKR088C NAB2P32505 525 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
TVP38YKR088C ENO1P00924 437 aaKnown RBP7.23□□□□□ -1.25
TVP38YKR088C INO80P53115 1489 aa7.23□□□□□ -1.25
TVP38YKR088C NAR1P23503 491 aaKnown RBP7.22□□□□□ -1.25
TVP38YKR088C SKP1P52286 194 aa7.22□□□□□ -1.25
TVP38YKR088C GIS4Q04233 774 aa7.22□□□□□ -1.25
TVP38YKR088C UTP4Q06679 776 aaKnown RBP7.22□□□□□ -1.25
TVP38YKR088C INP52P50942 1183 aa7.21□□□□□ -1.26
TVP38YKR088C AI3P03877 415 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms