RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C CEM1P39525 442 aa8.19□□□□□ -1.1
RPF2YKR081C UBP15P50101 1230 aa8.19□□□□□ -1.1
RPF2YKR081C YMR265CQ03508 461 aaKnown RBP8.18□□□□□ -1.1
RPF2YKR081C TIF1P10081 395 aaKnown RBP8.17□□□□□ -1.1
RPF2YKR081C JJJ3P47138 172 aa8.17□□□□□ -1.1
RPF2YKR081C UTP13Q05946 817 aaKnown RBP8.17□□□□□ -1.1
RPF2YKR081C HDA3Q06623 655 aa8.17□□□□□ -1.1
RPF2YKR081C RIM21P48565 533 aa8.16□□□□□ -1.1
RPF2YKR081C PUS1Q12211 544 aaKnown RBP8.16□□□□□ -1.1
RPF2YKR081C MDJ1P35191 511 aa8.15□□□□□ -1.1
RPF2YKR081C RTG2P32608 588 aaKnown RBP8.14□□□□□ -1.11
RPF2YKR081C SUM1P46676 1062 aa8.14□□□□□ -1.11
RPF2YKR081C THI72Q08579 599 aa8.14□□□□□ -1.11
RPF2YKR081C DIT1P21623 536 aa8.13□□□□□ -1.11
RPF2YKR081C SLA1P32790 1244 aa8.13□□□□□ -1.11
RPF2YKR081C KRE33P53914 1056 aaKnown RBP8.13□□□□□ -1.11
RPF2YKR081C ADE12P80210 433 aaKnown RBP8.13□□□□□ -1.11
RPF2YKR081C SLX8P40072 274 aa8.12□□□□□ -1.11
RPF2YKR081C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
RPF2YKR081C NSG2P53898 299 aa8.11□□□□□ -1.11
RPF2YKR081C PHM7Q12252 991 aa8.11□□□□□ -1.11
RPF2YKR081C MRX10Q05648 414 aa8.1□□□□□ -1.11
RPF2YKR081C TY1A-DR3Q12441 440 aa8.1□□□□□ -1.11
RPF2YKR081C ENO1P00924 437 aaKnown RBP8.09□□□□□ -1.11
RPF2YKR081C AI1P03875 834 aa8.09□□□□□ -1.11
RPF2YKR081C IRE1P32361 1115 aa8.08□□□□□ -1.12
RPF2YKR081C SYT1Q06836 1226 aa8.07□□□□□ -1.12
RPF2YKR081C RDS2P19541 446 aaKnown RBP8.06□□□□□ -1.12
RPF2YKR081C JJJ2P46997 583 aa8.06□□□□□ -1.12
RPF2YKR081C AIM9P40053 627 aaKnown RBP8.04□□□□□ -1.12
RPF2YKR081C LSB3P43603 459 aaKnown RBP8.04□□□□□ -1.12
RPF2YKR081C SWI5P08153 709 aa8.03□□□□□ -1.12
RPF2YKR081C SIS2P36024 562 aa8.03□□□□□ -1.12
RPF2YKR081C YDR461C-AQ2V2P7 80 aa8.03□□□□□ -1.12
RPF2YKR081C YFL034WP43564 1073 aa8.02□□□□□ -1.13
RPF2YKR081C FPS1P23900 669 aa8.01□□□□□ -1.13
RPF2YKR081C PEP12P32854 288 aa8□□□□□ -1.13
RPF2YKR081C MRPL16P38064 232 aa8□□□□□ -1.13
RPF2YKR081C PDI1P17967 522 aaKnown RBP7.99□□□□□ -1.13
RPF2YKR081C SHM1P37292 490 aaPredicted RBP7.99□□□□□ -1.13
RPF2YKR081C RPS6AP0CX37 236 aaKnown RBP7.98□□□□□ -1.13
RPF2YKR081C RPS6BP0CX38 236 aaPredicted RBP7.98□□□□□ -1.13
RPF2YKR081C NTH2P35172 780 aa7.98□□□□□ -1.13
RPF2YKR081C PDC6P26263 563 aaKnown RBP7.97□□□□□ -1.13
RPF2YKR081C YFL066CP43538 392 aa7.97□□□□□ -1.13
RPF2YKR081C PSH1Q12161 406 aa7.97□□□□□ -1.13
RPF2YKR081C YNR014WP53719 212 aa7.96□□□□□ -1.14
RPF2YKR081C STB3Q12427 513 aa7.96□□□□□ -1.14
RPF2YKR081C RLF2Q12495 606 aa7.96□□□□□ -1.14
RPF2YKR081C TTI1P36097 1038 aa7.95□□□□□ -1.14
RPF2YKR081C SBE2P42223 864 aaKnown RBP7.95□□□□□ -1.14
RPF2YKR081C TSC13Q99190 310 aa7.95□□□□□ -1.14
RPF2YKR081C YPQ2Q06328 317 aa7.94□□□□□ -1.14
RPF2YKR081C YTA6P40328 754 aa7.93□□□□□ -1.14
RPF2YKR081C YPR053CQ6Q5F3 151 aa7.93□□□□□ -1.14
RPF2YKR081C RPS31P05759 152 aaKnown RBP7.92□□□□□ -1.14
RPF2YKR081C TDA6Q06466 467 aa7.92□□□□□ -1.14
RPF2YKR081C KTR7P40504 517 aa7.91□□□□□ -1.14
RPF2YKR081C YMR187CQ03236 431 aa7.91□□□□□ -1.14
RPF2YKR081C SPR3P41901 512 aa7.9□□□□□ -1.14
RPF2YKR081C GPM1P00950 247 aaKnown RBP7.89□□□□□ -1.15
RPF2YKR081C PHO87P25360 923 aa7.89□□□□□ -1.15
RPF2YKR081C Q0182Q9ZZW1 134 aa7.89□□□□□ -1.15
RPF2YKR081C CYT1P07143 309 aa7.88□□□□□ -1.15
RPF2YKR081C CPS1P27614 576 aa7.88□□□□□ -1.15
RPF2YKR081C TGL4P36165 910 aa7.88□□□□□ -1.15
RPF2YKR081C BOI2P39969 1040 aa7.88□□□□□ -1.15
RPF2YKR081C YNL165WP53891 406 aa7.88□□□□□ -1.15
RPF2YKR081C RPP1AP05318 106 aaPredicted RBP7.87□□□□□ -1.15
RPF2YKR081C GAL2P13181 574 aa7.87□□□□□ -1.15
RPF2YKR081C HAP4P14064 554 aa7.87□□□□□ -1.15
RPF2YKR081C MCM1P11746 286 aa7.86□□□□□ -1.15
RPF2YKR081C SSA4P22202 642 aaKnown RBP7.86□□□□□ -1.15
RPF2YKR081C MET1P36150 593 aa7.86□□□□□ -1.15
RPF2YKR081C CCT8P47079 568 aaKnown RBP7.86□□□□□ -1.15
RPF2YKR081C ACS2P52910 683 aaKnown RBP7.86□□□□□ -1.15
RPF2YKR081C LEU1P07264 779 aaKnown RBP7.85□□□□□ -1.15
RPF2YKR081C SBP1P10080 294 aaKnown RBP7.85□□□□□ -1.15
RPF2YKR081C MLF3P32047 452 aa7.85□□□□□ -1.15
RPF2YKR081C GAS4Q08271 471 aa7.85□□□□□ -1.15
RPF2YKR081C SKN7P38889 622 aa7.83□□□□□ -1.16
RPF2YKR081C RGP1P16664 663 aa7.82□□□□□ -1.16
RPF2YKR081C KNS1P32350 737 aaPredicted RBP7.82□□□□□ -1.16
RPF2YKR081C ALD2P47771 506 aa7.82□□□□□ -1.16
RPF2YKR081C TY1A-DR2Q03964 440 aaKnown RBP7.82□□□□□ -1.16
RPF2YKR081C PDC5P16467 563 aaKnown RBP7.81□□□□□ -1.16
RPF2YKR081C ECM23Q02710 187 aa7.81□□□□□ -1.16
RPF2YKR081C PUP1P25043 261 aa7.8□□□□□ -1.16
RPF2YKR081C MCX1P38323 520 aaPredicted RBP7.8□□□□□ -1.16
RPF2YKR081C MTO1P53070 669 aa7.8□□□□□ -1.16
RPF2YKR081C UBP1P25037 809 aa7.79□□□□□ -1.16
RPF2YKR081C ROM1P53046 1155 aa7.79□□□□□ -1.16
RPF2YKR081C VAN1P23642 535 aa7.76□□□□□ -1.17
RPF2YKR081C UBX7P38349 436 aa7.76□□□□□ -1.17
RPF2YKR081C MSC7P38694 644 aa7.75□□□□□ -1.17
RPF2YKR081C HEH2Q03281 663 aa7.74□□□□□ -1.17
RPF2YKR081C SUB2Q07478 446 aaKnown RBP7.74□□□□□ -1.17
RPF2YKR081C NOB1Q08444 459 aaKnown RBP7.74□□□□□ -1.17
RPF2YKR081C YCK2P23292 546 aaKnown RBP7.73□□□□□ -1.17
RPF2YKR081C TAT1P38085 619 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms