RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAP1	YKR039W	BDP1	P46678	594 aa		11.87	□□□□□ -0.51
GAP1	YKR039W	FCP1	Q03254	732 aa		11.87	□□□□□ -0.51
GAP1	YKR039W	NCB2	Q92317	146 aa		11.87	□□□□□ -0.51
GAP1	YKR039W	RAD50	P12753	1312 aa		11.87	□□□□□ -0.51
GAP1	YKR039W	CDC16	P09798	840 aa		11.86	□□□□□ -0.51
GAP1	YKR039W	YIR014W	P40570	242 aa		11.86	□□□□□ -0.51
GAP1	YKR039W	PSH1	Q12161	406 aa		11.86	□□□□□ -0.51
GAP1	YKR039W	LYS4	P49367	693 aa	Predicted RBP	11.86	□□□□□ -0.51
GAP1	YKR039W	SUP35	P05453	685 aa	Known RBP	11.85	□□□□□ -0.51
GAP1	YKR039W	BUG1	Q12191	341 aa		11.85	□□□□□ -0.51
GAP1	YKR039W	MTC5	Q03897	1148 aa		11.84	□□□□□ -0.51
GAP1	YKR039W	HXT10	P43581	546 aa		11.83	□□□□□ -0.52
GAP1	YKR039W	BDF1	P35817	686 aa		11.81	□□□□□ -0.52
GAP1	YKR039W	UTP22	P53254	1237 aa	Predicted RBP	11.81	□□□□□ -0.52
GAP1	YKR039W	HAT1	Q12341	374 aa		11.81	□□□□□ -0.52
GAP1	YKR039W	OPY1	P38271	328 aa		11.79	□□□□□ -0.52
GAP1	YKR039W	UTP10	P42945	1769 aa	Known RBP	11.79	□□□□□ -0.52
GAP1	YKR039W	NOT3	P06102	836 aa	Known RBP	11.79	□□□□□ -0.52
GAP1	YKR039W	ECM21	P38167	1117 aa	Known RBP	11.79	□□□□□ -0.52
GAP1	YKR039W	GCR2	Q01722	534 aa		11.79	□□□□□ -0.52
GAP1	YKR039W	SNU66	Q12420	587 aa	Predicted RBP	11.79	□□□□□ -0.52
GAP1	YKR039W	SSK22	P25390	1331 aa	Predicted RBP	11.78	□□□□□ -0.52
GAP1	YKR039W	PDR18	P53756	1333 aa		11.78	□□□□□ -0.52
GAP1	YKR039W	VAS1	P07806	1104 aa	Known RBP	11.78	□□□□□ -0.52
GAP1	YKR039W	BRN1	P38170	754 aa		11.78	□□□□□ -0.52
GAP1	YKR039W	YGL242C	P53066	181 aa		11.78	□□□□□ -0.52
GAP1	YKR039W	RAT1	Q02792	1006 aa	Known RBP	11.78	□□□□□ -0.52
GAP1	YKR039W	RPG1	P38249	964 aa	Known RBP	11.77	□□□□□ -0.52
GAP1	YKR039W	MLC1	P53141	149 aa		11.77	□□□□□ -0.52
GAP1	YKR039W	CTI6	Q08923	506 aa		11.77	□□□□□ -0.52
GAP1	YKR039W	SAC3	P46674	1301 aa		11.77	□□□□□ -0.53
GAP1	YKR039W	DLD1	P32891	587 aa		11.76	□□□□□ -0.53
GAP1	YKR039W	ALD2	P47771	506 aa		11.76	□□□□□ -0.53
GAP1	YKR039W	CTH1	P47976	325 aa		11.76	□□□□□ -0.53
GAP1	YKR039W	GYP5	Q12344	894 aa		11.76	□□□□□ -0.53
GAP1	YKR039W	SLA1	P32790	1244 aa		11.75	□□□□□ -0.53
GAP1	YKR039W	RMD1	Q03441	430 aa		11.75	□□□□□ -0.53
GAP1	YKR039W	ALD3	P54114	506 aa		11.74	□□□□□ -0.53
GAP1	YKR039W	GTT3	P39996	337 aa		11.74	□□□□□ -0.53
GAP1	YKR039W	ALO1	P54783	526 aa	Known RBP	11.74	□□□□□ -0.53
GAP1	YKR039W	DIB1	Q06819	143 aa	Predicted RBP	11.74	□□□□□ -0.53
GAP1	YKR039W	BRE1	Q07457	700 aa	Known RBP	11.74	□□□□□ -0.53
GAP1	YKR039W	KTR3	P38130	404 aa	Predicted RBP	11.73	□□□□□ -0.53
GAP1	YKR039W	SEC18	P18759	758 aa	Known RBP	11.72	□□□□□ -0.53
GAP1	YKR039W	HPC2	Q01448	625 aa		11.72	□□□□□ -0.53
GAP1	YKR039W	UBP16	Q02863	499 aa		11.72	□□□□□ -0.53
GAP1	YKR039W	IME2	P32581	645 aa		11.72	□□□□□ -0.53
GAP1	YKR039W	YBL086C	P38177	466 aa		11.72	□□□□□ -0.53
GAP1	YKR039W	TOS1	P38288	455 aa		11.72	□□□□□ -0.53
GAP1	YKR039W	SSA2	P10592	639 aa	Known RBP	11.71	□□□□□ -0.54
GAP1	YKR039W	HXT13	P39924	564 aa		11.71	□□□□□ -0.54
GAP1	YKR039W	MRPS35	P53292	345 aa		11.71	□□□□□ -0.54
GAP1	YKR039W	RIX7	Q07844	837 aa	Known RBP	11.71	□□□□□ -0.54
GAP1	YKR039W	AI2	P03876	854 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	PRI1	P10363	409 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	PCT1	P13259	424 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	HXT17	P53631	564 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	FPR4	Q06205	392 aa	Predicted RBP	11.7	□□□□□ -0.54
GAP1	YKR039W	RIM20	Q12033	661 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	RLF2	Q12495	606 aa		11.7	□□□□□ -0.54
GAP1	YKR039W	UGA2	P38067	497 aa		11.69	□□□□□ -0.54
GAP1	YKR039W	BDF2	Q07442	638 aa		11.69	□□□□□ -0.54
GAP1	YKR039W	ADR1	P07248	1323 aa		11.68	□□□□□ -0.54
GAP1	YKR039W	RPN7	Q06103	429 aa	Known RBP	11.68	□□□□□ -0.54
GAP1	YKR039W	KTR1	P27810	393 aa	Known RBP	11.67	□□□□□ -0.54
GAP1	YKR039W	YNL193W	P53870	558 aa		11.67	□□□□□ -0.54
GAP1	YKR039W	SYF1	Q04048	859 aa	Predicted RBP	11.67	□□□□□ -0.54
GAP1	YKR039W	NGR1	P32831	672 aa	Known RBP	11.67	□□□□□ -0.54
GAP1	YKR039W	AAP1	P37898	856 aa	Known RBP	11.67	□□□□□ -0.54
GAP1	YKR039W	PIB2	P53191	635 aa		11.65	□□□□□ -0.54
GAP1	YKR039W	SRC1	Q03707	834 aa		11.65	□□□□□ -0.55
GAP1	YKR039W	THI3	Q07471	609 aa		11.65	□□□□□ -0.55
GAP1	YKR039W	RRI2	Q12348	645 aa		11.65	□□□□□ -0.55
GAP1	YKR039W	DPH6	Q12429	685 aa		11.65	□□□□□ -0.55
GAP1	YKR039W	PBY1	P38254	753 aa		11.64	□□□□□ -0.55
GAP1	YKR039W	STM1	P39015	273 aa	Known RBP	11.64	□□□□□ -0.55
GAP1	YKR039W	EPS1	P40557	701 aa		11.64	□□□□□ -0.55
GAP1	YKR039W	IRC3	Q06683	689 aa		11.64	□□□□□ -0.55
GAP1	YKR039W	POM152	P39685	1337 aa		11.64	□□□□□ -0.55
GAP1	YKR039W	SRS2	P12954	1174 aa		11.63	□□□□□ -0.55
GAP1	YKR039W	MGM1	P32266	881 aa		11.63	□□□□□ -0.55
GAP1	YKR039W	ICP55	P40051	511 aa		11.63	□□□□□ -0.55
GAP1	YKR039W	PIF1	P07271	859 aa		11.62	□□□□□ -0.55
GAP1	YKR039W	FRD1	P32614	470 aa	Known RBP	11.62	□□□□□ -0.55
GAP1	YKR039W	OSH3	P38713	996 aa	Known RBP	11.62	□□□□□ -0.55
GAP1	YKR039W	EAF7	P53911	425 aa	Known RBP	11.62	□□□□□ -0.55
GAP1	YKR039W	RNR2	P09938	399 aa	Known RBP	11.61	□□□□□ -0.55
GAP1	YKR039W	HAL5	P38970	855 aa	Known RBP	11.61	□□□□□ -0.55
GAP1	YKR039W	NUG1	P40010	520 aa	Known RBP	11.61	□□□□□ -0.55
GAP1	YKR039W	TRL1	P09880	827 aa	Known RBP	11.6	□□□□□ -0.55
GAP1	YKR039W	VPS24	P36095	224 aa	Known RBP	11.6	□□□□□ -0.55
GAP1	YKR039W	PFF1	P38244	976 aa		11.6	□□□□□ -0.55
GAP1	YKR039W	RPN1	P38764	993 aa	Known RBP	11.6	□□□□□ -0.55
GAP1	YKR039W	SAS4	Q04003	481 aa		11.6	□□□□□ -0.55
GAP1	YKR039W	CAF20	P12962	161 aa	Known RBP	11.6	□□□□□ -0.55
GAP1	YKR039W	SIT4	P20604	311 aa		11.6	□□□□□ -0.55
GAP1	YKR039W	TPM1	P17536	199 aa	Known RBP	11.59	□□□□□ -0.55
GAP1	YKR039W	GLO3	P38682	493 aa	Known RBP	11.59	□□□□□ -0.55
GAP1	YKR039W	KRI1	P42846	591 aa	Known RBP	11.58	□□□□□ -0.56
GAP1	YKR039W	LSP1	Q12230	341 aa	Known RBP	11.58	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms