RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	THI12	P42883	340 aa		4.83	□□□□□ -1.64
SHQ1	YIL104C	THI5	P43534	340 aa		4.83	□□□□□ -1.64
SHQ1	YIL104C	THI11	P47183	340 aa		4.83	□□□□□ -1.64
SHQ1	YIL104C	YNL115C	P53925	644 aa		4.83	□□□□□ -1.64
SHQ1	YIL104C	THI13	Q07748	340 aa		4.83	□□□□□ -1.64
SHQ1	YIL104C	KXD1	P53158	218 aa		4.82	□□□□□ -1.64
SHQ1	YIL104C	RAD9	P14737	1309 aa		4.82	□□□□□ -1.64
SHQ1	YIL104C	RTC1	Q08281	1341 aa		4.82	□□□□□ -1.64
SHQ1	YIL104C	GCN2	P15442	1659 aa		4.81	□□□□□ -1.64
SHQ1	YIL104C	PBS2	P08018	668 aa		4.81	□□□□□ -1.64
SHQ1	YIL104C	TPD3	P31383	635 aa		4.81	□□□□□ -1.64
SHQ1	YIL104C	MSB3	P48566	633 aa	Predicted RBP	4.81	□□□□□ -1.64
SHQ1	YIL104C	KRE5	P22023	1365 aa		4.81	□□□□□ -1.64
SHQ1	YIL104C	ALD4	P46367	519 aa	Known RBP	4.8	□□□□□ -1.64
SHQ1	YIL104C	SYH1	Q02875	849 aa	Known RBP	4.8	□□□□□ -1.64
SHQ1	YIL104C	CFT1	Q06632	1357 aa	Known RBP	4.8	□□□□□ -1.64
SHQ1	YIL104C	YMR196W	Q04336	1088 aa		4.79	□□□□□ -1.64
SHQ1	YIL104C	CAB1	Q04430	367 aa		4.79	□□□□□ -1.64
SHQ1	YIL104C	RIA1	P53893	1110 aa		4.78	□□□□□ -1.64
SHQ1	YIL104C	YLR346C	Q06139	101 aa		4.78	□□□□□ -1.64
SHQ1	YIL104C	NUP192	P47054	1683 aa		4.78	□□□□□ -1.64
SHQ1	YIL104C	SIT4	P20604	311 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	ACO2	P39533	789 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	HXT10	P43581	546 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	YNR029C	P53729	429 aa	Known RBP	4.77	□□□□□ -1.65
SHQ1	YIL104C	CAF120	P53836	1060 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	MTC5	Q03897	1148 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	UGA3	P26370	528 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	PAF1	P38351	445 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	MAM3	Q12296	706 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	SRF1	Q12516	437 aa		4.77	□□□□□ -1.65
SHQ1	YIL104C	BCK1	Q01389	1478 aa		4.76	□□□□□ -1.65
SHQ1	YIL104C	TAF5	P38129	798 aa		4.76	□□□□□ -1.65
SHQ1	YIL104C	TEA1	P47988	759 aa		4.76	□□□□□ -1.65
SHQ1	YIL104C	PDC1	P06169	563 aa	Known RBP	4.74	□□□□□ -1.65
SHQ1	YIL104C	MRX12	P47084	519 aa		4.74	□□□□□ -1.65
SHQ1	YIL104C	PTK2	P47116	818 aa	Known RBP	4.74	□□□□□ -1.65
SHQ1	YIL104C	NOP7	P53261	605 aa	Known RBP	4.74	□□□□□ -1.65
SHQ1	YIL104C	OPT2	Q06593	877 aa		4.74	□□□□□ -1.65
SHQ1	YIL104C	TAF8	Q03750	510 aa		4.73	□□□□□ -1.65
SHQ1	YIL104C	USO1	P25386	1790 aa		4.73	□□□□□ -1.65
SHQ1	YIL104C	TRK2	P28584	889 aa		4.72	□□□□□ -1.65
SHQ1	YIL104C	KIP2	P28743	706 aa		4.72	□□□□□ -1.65
SHQ1	YIL104C	YGR035C	P53222	116 aa		4.72	□□□□□ -1.65
SHQ1	YIL104C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.72	□□□□□ -1.65
SHQ1	YIL104C	PPH3	P32345	308 aa		4.72	□□□□□ -1.65
SHQ1	YIL104C	GLY1	P37303	387 aa	Known RBP	4.72	□□□□□ -1.65
SHQ1	YIL104C	ESL2	P36168	1195 aa		4.71	□□□□□ -1.66
SHQ1	YIL104C	IES2	P40154	320 aa		4.71	□□□□□ -1.66
SHQ1	YIL104C	NUP85	P46673	744 aa		4.71	□□□□□ -1.66
SHQ1	YIL104C	NIS1	P53939	407 aa		4.71	□□□□□ -1.66
SHQ1	YIL104C	ORC1	P54784	914 aa	Predicted RBP	4.71	□□□□□ -1.66
SHQ1	YIL104C	ALR1	Q08269	859 aa		4.71	□□□□□ -1.66
SHQ1	YIL104C	TYW1	Q08960	810 aa	Known RBP	4.71	□□□□□ -1.66
SHQ1	YIL104C	SLY41	P22215	453 aa		4.7	□□□□□ -1.66
SHQ1	YIL104C	RPA14	P50106	137 aa		4.7	□□□□□ -1.66
SHQ1	YIL104C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.7	□□□□□ -1.66
SHQ1	YIL104C	MRT4	P33201	236 aa	Known RBP	4.69	□□□□□ -1.66
SHQ1	YIL104C	IXR1	P33417	597 aa		4.69	□□□□□ -1.66
SHQ1	YIL104C	SCW11	P53189	542 aa		4.69	□□□□□ -1.66
SHQ1	YIL104C	RCM1	P53972	490 aa		4.69	□□□□□ -1.66
SHQ1	YIL104C	TBF1	Q02457	562 aa		4.69	□□□□□ -1.66
SHQ1	YIL104C	MIP1	P15801	1254 aa		4.68	□□□□□ -1.66
SHQ1	YIL104C	CPS1	P27614	576 aa		4.68	□□□□□ -1.66
SHQ1	YIL104C	DSF2	P38213	736 aa		4.68	□□□□□ -1.66
SHQ1	YIL104C	KIP3	P53086	805 aa	Known RBP	4.68	□□□□□ -1.66
SHQ1	YIL104C	PUS6	P53294	404 aa		4.68	□□□□□ -1.66
SHQ1	YIL104C	APP1	P53933	587 aa		4.68	□□□□□ -1.66
SHQ1	YIL104C	SPE2	P21182	396 aa		4.67	□□□□□ -1.66
SHQ1	YIL104C	YPR097W	Q06839	1073 aa		4.67	□□□□□ -1.66
SHQ1	YIL104C	YIR007W	P40566	764 aa		4.67	□□□□□ -1.66
SHQ1	YIL104C	NUP42	P49686	430 aa	Known RBP	4.66	□□□□□ -1.66
SHQ1	YIL104C	FPK1	P53739	893 aa		4.66	□□□□□ -1.66
SHQ1	YIL104C	HPF1	Q05164	967 aa		4.66	□□□□□ -1.66
SHQ1	YIL104C	YDL206W	Q12424	762 aa		4.66	□□□□□ -1.66
SHQ1	YIL104C	YML133C	Q03099	1374 aa		4.65	□□□□□ -1.66
SHQ1	YIL104C	YLL067C	Q07888	1374 aa		4.65	□□□□□ -1.66
SHQ1	YIL104C	YLL066C	Q99208	1374 aa		4.65	□□□□□ -1.66
SHQ1	YIL104C	TY1A-BL	Q12266	440 aa		4.65	□□□□□ -1.67
SHQ1	YIL104C	CHZ1	P40019	153 aa	Predicted RBP	4.64	□□□□□ -1.67
SHQ1	YIL104C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SHQ1	YIL104C	ARG82	P07250	355 aa		4.63	□□□□□ -1.67
SHQ1	YIL104C	LSC2	P53312	427 aa		4.63	□□□□□ -1.67
SHQ1	YIL104C	UBP2	Q01476	1272 aa		4.63	□□□□□ -1.67
SHQ1	YIL104C	YPR204W	Q08995	1032 aa		4.63	□□□□□ -1.67
SHQ1	YIL104C	ENT1	Q12518	454 aa		4.63	□□□□□ -1.67
SHQ1	YIL104C	YLR419W	Q06698	1435 aa	Known RBP	4.63	□□□□□ -1.67
SHQ1	YIL104C	PSK1	P31374	1356 aa		4.62	□□□□□ -1.67
SHQ1	YIL104C	PRP43	P53131	767 aa	Known RBP	4.62	□□□□□ -1.67
SHQ1	YIL104C	ADE6	P38972	1358 aa	Known RBP	4.61	□□□□□ -1.67
SHQ1	YIL104C	TRM1	P15565	570 aa	Known RBP	4.61	□□□□□ -1.67
SHQ1	YIL104C	DIT2	P21595	489 aa		4.6	□□□□□ -1.67
SHQ1	YIL104C	GLN1	P32288	370 aa	Known RBP	4.6	□□□□□ -1.67
SHQ1	YIL104C	ICP55	P40051	511 aa		4.6	□□□□□ -1.67
SHQ1	YIL104C	AAD14	P42884	376 aa		4.6	□□□□□ -1.67
SHQ1	YIL104C	HST2	P53686	357 aa		4.6	□□□□□ -1.67
SHQ1	YIL104C	RPS24A	P0CX31	135 aa	Known RBP	4.59	□□□□□ -1.67
SHQ1	YIL104C	RPS24B	P0CX32	135 aa	Known RBP	4.59	□□□□□ -1.67
SHQ1	YIL104C	PRP5	P21372	849 aa	Predicted RBP	4.59	□□□□□ -1.67
SHQ1	YIL104C	NAP1	P25293	417 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 63 ms