RNA–Protein interactions for RNA: YHR042W

NCP1, Transcript of NADP-cytochrome P450 reductase, yeast

Gene NCP1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCP1	YHR042W	MDG1	P53885	366 aa		13.33	□□□□□ -0.27
NCP1	YHR042W	MNN4	P36044	1178 aa		13.33	□□□□□ -0.28
NCP1	YHR042W	AAP1	P37898	856 aa	Known RBP	13.33	□□□□□ -0.28
NCP1	YHR042W	LCD1	Q04377	747 aa		13.33	□□□□□ -0.28
NCP1	YHR042W	APL2	P36000	726 aa	Predicted RBP	13.32	□□□□□ -0.28
NCP1	YHR042W	HST1	P53685	503 aa		13.32	□□□□□ -0.28
NCP1	YHR042W	RVS167	P39743	482 aa	Known RBP	13.32	□□□□□ -0.28
NCP1	YHR042W	MRPS35	P53292	345 aa		13.32	□□□□□ -0.28
NCP1	YHR042W	RKM3	P38222	552 aa		13.31	□□□□□ -0.28
NCP1	YHR042W	FRK1	Q03002	865 aa	Predicted RBP	13.31	□□□□□ -0.28
NCP1	YHR042W	APC11	Q12157	165 aa		13.3	□□□□□ -0.28
NCP1	YHR042W	RSF2	P46974	1380 aa		13.3	□□□□□ -0.28
NCP1	YHR042W	RPN12	P32496	274 aa		13.3	□□□□□ -0.28
NCP1	YHR042W	ALO1	P54783	526 aa	Known RBP	13.3	□□□□□ -0.28
NCP1	YHR042W	KTR3	P38130	404 aa	Predicted RBP	13.29	□□□□□ -0.28
NCP1	YHR042W	PIB2	P53191	635 aa		13.28	□□□□□ -0.28
NCP1	YHR042W	DID4	P36108	232 aa		13.28	□□□□□ -0.28
NCP1	YHR042W	YBP2	P53169	641 aa		13.28	□□□□□ -0.28
NCP1	YHR042W	DUR1,2	P32528	1835 aa	Known RBP	13.27	□□□□□ -0.28
NCP1	YHR042W	BRE1	Q07457	700 aa	Known RBP	13.27	□□□□□ -0.28
NCP1	YHR042W	YGL242C	P53066	181 aa		13.27	□□□□□ -0.29
NCP1	YHR042W	ATG13	Q06628	738 aa		13.27	□□□□□ -0.29
NCP1	YHR042W	YJR008W	P47085	338 aa		13.26	□□□□□ -0.29
NCP1	YHR042W	ENT3	P47160	408 aa		13.26	□□□□□ -0.29
NCP1	YHR042W	RMT2	Q03305	412 aa		13.25	□□□□□ -0.29
NCP1	YHR042W	TUM1	Q08686	304 aa	Known RBP	13.25	□□□□□ -0.29
NCP1	YHR042W	TSR3	Q12094	313 aa	Known RBP	13.25	□□□□□ -0.29
NCP1	YHR042W	RSM25	P40496	264 aa		13.25	□□□□□ -0.29
NCP1	YHR042W	FCP1	Q03254	732 aa		13.25	□□□□□ -0.29
NCP1	YHR042W	ENT1	Q12518	454 aa		13.25	□□□□□ -0.29
NCP1	YHR042W	RPL19A	P0CX82	189 aa	Known RBP	13.24	□□□□□ -0.29
NCP1	YHR042W	RPL19B	P0CX83	189 aa	Predicted RBP	13.24	□□□□□ -0.29
NCP1	YHR042W	MCM2	P29469	868 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	YKL133C	P36066	463 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	SSF1	P38789	453 aa	Predicted RBP	13.24	□□□□□ -0.29
NCP1	YHR042W	AIM9	P40053	627 aa	Known RBP	13.24	□□□□□ -0.29
NCP1	YHR042W	IES2	P40154	320 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	TCB2	P48231	1178 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	MLC1	P53141	149 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	KRE33	P53914	1056 aa	Known RBP	13.24	□□□□□ -0.29
NCP1	YHR042W	KEX1	P09620	729 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	REB1	P21538	810 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	YPR204W	Q08995	1032 aa		13.24	□□□□□ -0.29
NCP1	YHR042W	PIL1	P53252	339 aa	Known RBP	13.23	□□□□□ -0.29
NCP1	YHR042W	PKH1	Q03407	766 aa		13.23	□□□□□ -0.29
NCP1	YHR042W	NOP53	Q12080	455 aa	Known RBP	13.22	□□□□□ -0.29
NCP1	YHR042W	CWH41	P53008	833 aa		13.22	□□□□□ -0.29
NCP1	YHR042W	PEX19	Q07418	342 aa		13.22	□□□□□ -0.29
NCP1	YHR042W	KTR1	P27810	393 aa	Known RBP	13.21	□□□□□ -0.29
NCP1	YHR042W	MBR1	P23493	339 aa		13.2	□□□□□ -0.3
NCP1	YHR042W	HYR1	P40581	163 aa	Known RBP	13.2	□□□□□ -0.3
NCP1	YHR042W	CTF18	P49956	741 aa		13.2	□□□□□ -0.3
NCP1	YHR042W	AI2	P03876	854 aa		13.19	□□□□□ -0.3
NCP1	YHR042W	PRX1	P34227	261 aa	Known RBP	13.19	□□□□□ -0.3
NCP1	YHR042W	MIC60	P36112	540 aa		13.19	□□□□□ -0.3
NCP1	YHR042W	SET1	P38827	1080 aa	Known RBP	13.19	□□□□□ -0.3
NCP1	YHR042W	VID28	P40547	921 aa		13.19	□□□□□ -0.3
NCP1	YHR042W	PSH1	Q12161	406 aa		13.19	□□□□□ -0.3
NCP1	YHR042W	PGA3	Q12746	312 aa	Known RBP	13.19	□□□□□ -0.3
NCP1	YHR042W	STM1	P39015	273 aa	Known RBP	13.19	□□□□□ -0.3
NCP1	YHR042W	ARG8	P18544	423 aa		13.18	□□□□□ -0.3
NCP1	YHR042W	DCD1	P06773	312 aa		13.17	□□□□□ -0.3
NCP1	YHR042W	SSL2	Q00578	843 aa		13.17	□□□□□ -0.3
NCP1	YHR042W	SSP2	Q08646	371 aa		13.17	□□□□□ -0.3
NCP1	YHR042W	SSK22	P25390	1331 aa	Predicted RBP	13.17	□□□□□ -0.3
NCP1	YHR042W	AIM44	Q99299	758 aa		13.17	□□□□□ -0.3
NCP1	YHR042W	FRS2	P15625	503 aa	Known RBP	13.16	□□□□□ -0.3
NCP1	YHR042W	ARP5	P53946	755 aa		13.16	□□□□□ -0.3
NCP1	YHR042W	ENV9	Q08651	330 aa		13.16	□□□□□ -0.3
NCP1	YHR042W	LEO1	P38439	464 aa		13.16	□□□□□ -0.3
NCP1	YHR042W	YLR271W	Q06152	274 aa		13.16	□□□□□ -0.3
NCP1	YHR042W	PBY1	P38254	753 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	CCT5	P40413	562 aa	Known RBP	13.15	□□□□□ -0.3
NCP1	YHR042W	PEX14	P53112	341 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	APP1	P53933	587 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	YRF1-3	P0CX14	1859 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	YRF1-7	P0CX15	1859 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	YRF1-6	P53819	1859 aa		13.15	□□□□□ -0.3
NCP1	YHR042W	CIC1	P38779	376 aa	Known RBP	13.14	□□□□□ -0.31
NCP1	YHR042W	TRS33	Q99394	268 aa		13.14	□□□□□ -0.31
NCP1	YHR042W	CPA2	P03965	1118 aa	Known RBP	13.14	□□□□□ -0.31
NCP1	YHR042W	YGL082W	P53155	381 aa		13.14	□□□□□ -0.31
NCP1	YHR042W	EPS1	P40557	701 aa		13.13	□□□□□ -0.31
NCP1	YHR042W	RPN7	Q06103	429 aa	Known RBP	13.12	□□□□□ -0.31
NCP1	YHR042W	GYP5	Q12344	894 aa		13.12	□□□□□ -0.31
NCP1	YHR042W	UBP16	Q02863	499 aa		13.12	□□□□□ -0.31
NCP1	YHR042W	SEC18	P18759	758 aa	Known RBP	13.11	□□□□□ -0.31
NCP1	YHR042W	MRPL10	P36520	322 aa		13.11	□□□□□ -0.31
NCP1	YHR042W	SPO22	P40511	975 aa		13.11	□□□□□ -0.31
NCP1	YHR042W	RDS1	P25611	832 aa		13.11	□□□□□ -0.31
NCP1	YHR042W	ELM1	P32801	640 aa		13.1	□□□□□ -0.31
NCP1	YHR042W	COB	P00163	385 aa		13.09	□□□□□ -0.31
NCP1	YHR042W	YNL193W	P53870	558 aa		13.09	□□□□□ -0.31
NCP1	YHR042W	NPR3	P38742	1146 aa		13.09	□□□□□ -0.31
NCP1	YHR042W	VMS1	Q04311	632 aa	Known RBP	13.09	□□□□□ -0.31
NCP1	YHR042W	TIM50	Q02776	476 aa		13.08	□□□□□ -0.32
NCP1	YHR042W	SNU66	Q12420	587 aa	Predicted RBP	13.08	□□□□□ -0.32
NCP1	YHR042W	SER1	P33330	395 aa	Known RBP	13.08	□□□□□ -0.32
NCP1	YHR042W	TTI1	P36097	1038 aa		13.08	□□□□□ -0.32
NCP1	YHR042W	ELG1	Q12050	791 aa		13.08	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 216.6 ms