RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W RLF2Q12495 606 aa6.09□□□□□ -1.43
VMA21YGR105W RPS6AP0CX37 236 aaKnown RBP6.08□□□□□ -1.44
VMA21YGR105W RPS6BP0CX38 236 aaPredicted RBP6.08□□□□□ -1.44
VMA21YGR105W PHO87P25360 923 aa6.08□□□□□ -1.44
VMA21YGR105W OSH7P38755 437 aa6.08□□□□□ -1.44
VMA21YGR105W SUM1P46676 1062 aa6.08□□□□□ -1.44
VMA21YGR105W GAL2P13181 574 aa6.07□□□□□ -1.44
VMA21YGR105W DAL1P32375 460 aa6.07□□□□□ -1.44
VMA21YGR105W YIR007WP40566 764 aa6.07□□□□□ -1.44
VMA21YGR105W ALA1P40825 983 aaKnown RBP6.07□□□□□ -1.44
VMA21YGR105W ECM23Q02710 187 aa6.07□□□□□ -1.44
VMA21YGR105W CDC19P00549 500 aaKnown RBP6.06□□□□□ -1.44
VMA21YGR105W VTC4P47075 721 aa6.06□□□□□ -1.44
VMA21YGR105W MSN5P52918 1224 aa6.06□□□□□ -1.44
VMA21YGR105W YPL062WQ02781 134 aa6.06□□□□□ -1.44
VMA21YGR105W HAP4P14064 554 aa6.05□□□□□ -1.44
VMA21YGR105W PUP1P25043 261 aa6.04□□□□□ -1.44
VMA21YGR105W SLA1P32790 1244 aa6.04□□□□□ -1.44
VMA21YGR105W NAM8Q00539 523 aaKnown RBP6.04□□□□□ -1.44
VMA21YGR105W YPQ2Q06328 317 aa6.04□□□□□ -1.44
VMA21YGR105W TY1A-DR3Q12441 440 aa6.04□□□□□ -1.44
VMA21YGR105W CYT1P07143 309 aa6.03□□□□□ -1.44
VMA21YGR105W ROG3P43602 733 aa6.03□□□□□ -1.44
VMA21YGR105W ROM1P53046 1155 aa6.03□□□□□ -1.44
VMA21YGR105W TY1A-MR1Q04215 440 aa6.03□□□□□ -1.44
VMA21YGR105W SSA4P22202 642 aaKnown RBP6.02□□□□□ -1.45
VMA21YGR105W AHP1P38013 176 aaKnown RBP6.02□□□□□ -1.45
VMA21YGR105W JJJ2P46997 583 aa6.02□□□□□ -1.45
VMA21YGR105W GAS4Q08271 471 aa6.02□□□□□ -1.45
VMA21YGR105W SHM1P37292 490 aaPredicted RBP6.01□□□□□ -1.45
VMA21YGR105W UBX7P38349 436 aa6.01□□□□□ -1.45
VMA21YGR105W YML083CQ04526 418 aa6.01□□□□□ -1.45
VMA21YGR105W CCP1P00431 361 aa6□□□□□ -1.45
VMA21YGR105W IRE1P32361 1115 aa6□□□□□ -1.45
VMA21YGR105W RGA1P39083 1007 aa6□□□□□ -1.45
VMA21YGR105W NOB1Q08444 459 aaKnown RBP6□□□□□ -1.45
VMA21YGR105W UBP15P50101 1230 aa5.99□□□□□ -1.45
VMA21YGR105W RPS31P05759 152 aaKnown RBP5.98□□□□□ -1.45
VMA21YGR105W MCM1P11746 286 aa5.97□□□□□ -1.45
VMA21YGR105W VAN1P23642 535 aa5.97□□□□□ -1.45
VMA21YGR105W YNL165WP53891 406 aa5.97□□□□□ -1.45
VMA21YGR105W SUB2Q07478 446 aaKnown RBP5.97□□□□□ -1.45
VMA21YGR105W UBP1P25037 809 aa5.96□□□□□ -1.46
VMA21YGR105W PSH1Q12161 406 aa5.96□□□□□ -1.46
VMA21YGR105W PDC6P26263 563 aaKnown RBP5.95□□□□□ -1.46
VMA21YGR105W NGR1P32831 672 aaKnown RBP5.95□□□□□ -1.46
VMA21YGR105W CUZ1P53899 274 aa5.95□□□□□ -1.46
VMA21YGR105W HPF1Q05164 967 aa5.95□□□□□ -1.46
VMA21YGR105W Q0182Q9ZZW1 134 aa5.95□□□□□ -1.46
VMA21YGR105W MLF3P32047 452 aa5.93□□□□□ -1.46
VMA21YGR105W SUV3P32580 737 aa5.93□□□□□ -1.46
VMA21YGR105W YGR035CP53222 116 aa5.93□□□□□ -1.46
VMA21YGR105W TRS33Q99394 268 aa5.93□□□□□ -1.46
VMA21YGR105W YMR265CQ03508 461 aaKnown RBP5.92□□□□□ -1.46
VMA21YGR105W DIT1P21623 536 aa5.91□□□□□ -1.46
VMA21YGR105W HXT5P38695 592 aa5.91□□□□□ -1.46
VMA21YGR105W YTA6P40328 754 aa5.91□□□□□ -1.46
VMA21YGR105W CWH41P53008 833 aa5.91□□□□□ -1.46
VMA21YGR105W MRPL16P38064 232 aa5.9□□□□□ -1.46
VMA21YGR105W ALD2P47771 506 aa5.9□□□□□ -1.46
VMA21YGR105W KRE33P53914 1056 aaKnown RBP5.9□□□□□ -1.46
VMA21YGR105W PUN1Q06991 263 aa5.9□□□□□ -1.46
VMA21YGR105W LEU1P07264 779 aaKnown RBP5.89□□□□□ -1.47
VMA21YGR105W CEM1P39525 442 aa5.89□□□□□ -1.47
VMA21YGR105W PUF6Q04373 656 aaKnown RBP5.89□□□□□ -1.47
VMA21YGR105W STB3Q12427 513 aa5.89□□□□□ -1.47
VMA21YGR105W SCD5P34758 872 aa5.88□□□□□ -1.47
VMA21YGR105W ALD4P46367 519 aaKnown RBP5.88□□□□□ -1.47
VMA21YGR105W LYS5P50113 272 aa5.88□□□□□ -1.47
VMA21YGR105W ADE12P80210 433 aaKnown RBP5.88□□□□□ -1.47
VMA21YGR105W FOX2Q02207 900 aaKnown RBP5.88□□□□□ -1.47
VMA21YGR105W CWC15Q03772 175 aaKnown RBP5.88□□□□□ -1.47
VMA21YGR105W CAB1Q04430 367 aa5.88□□□□□ -1.47
VMA21YGR105W TRK2P28584 889 aa5.87□□□□□ -1.47
VMA21YGR105W MTO1P53070 669 aa5.87□□□□□ -1.47
VMA21YGR105W TAF7Q05021 590 aa5.87□□□□□ -1.47
VMA21YGR105W SYT1Q06836 1226 aa5.87□□□□□ -1.47
VMA21YGR105W YBR197CP38306 217 aa5.86□□□□□ -1.47
VMA21YGR105W TPS3P38426 1054 aaKnown RBP5.86□□□□□ -1.47
VMA21YGR105W DPH6Q12429 685 aa5.86□□□□□ -1.47
VMA21YGR105W SRS2P12954 1174 aa5.85□□□□□ -1.47
VMA21YGR105W RGP1P16664 663 aa5.85□□□□□ -1.47
VMA21YGR105W SPR3P41901 512 aa5.85□□□□□ -1.47
VMA21YGR105W JJJ3P47138 172 aa5.85□□□□□ -1.47
VMA21YGR105W UTP4Q06679 776 aaKnown RBP5.85□□□□□ -1.47
VMA21YGR105W YDR461C-AQ2V2P7 80 aa5.85□□□□□ -1.47
VMA21YGR105W KAP122P32767 1081 aa5.84□□□□□ -1.47
VMA21YGR105W PNP1Q05788 311 aa5.84□□□□□ -1.47
VMA21YGR105W FPS1P23900 669 aa5.83□□□□□ -1.48
VMA21YGR105W ISC10P32645 267 aa5.83□□□□□ -1.48
VMA21YGR105W QDR2P40474 542 aa5.83□□□□□ -1.48
VMA21YGR105W RPL34AP87262 121 aaPredicted RBP5.83□□□□□ -1.48
VMA21YGR105W SSA1P10591 642 aaKnown RBP5.82□□□□□ -1.48
VMA21YGR105W MRPL33P20084 86 aa5.82□□□□□ -1.48
VMA21YGR105W VMA3P25515 160 aa5.82□□□□□ -1.48
VMA21YGR105W CUS1Q02554 436 aaPredicted RBP5.81□□□□□ -1.48
VMA21YGR105W RPC31P17890 251 aa5.79□□□□□ -1.48
VMA21YGR105W MSC7P38694 644 aa5.79□□□□□ -1.48
VMA21YGR105W SKP1P52286 194 aa5.79□□□□□ -1.48
VMA21YGR105W NAB2P32505 525 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms