RNA–Protein interactions for RNA: YFR037C

RSC8, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC8, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC8	YFR037C	UBP12	P39538	1254 aa		10.95	□□□□□ -0.66
RSC8	YFR037C	BDP1	P46678	594 aa		10.95	□□□□□ -0.66
RSC8	YFR037C	TUM1	Q08686	304 aa	Known RBP	10.95	□□□□□ -0.66
RSC8	YFR037C	DUR1,2	P32528	1835 aa	Known RBP	10.94	□□□□□ -0.66
RSC8	YFR037C	SET1	P38827	1080 aa	Known RBP	10.94	□□□□□ -0.66
RSC8	YFR037C	YPR204W	Q08995	1032 aa		10.94	□□□□□ -0.66
RSC8	YFR037C	GRX1	P25373	110 aa	Known RBP	10.93	□□□□□ -0.66
RSC8	YFR037C	YLR271W	Q06152	274 aa		10.93	□□□□□ -0.66
RSC8	YFR037C	ROX1	P25042	368 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	APL2	P36000	726 aa	Predicted RBP	10.92	□□□□□ -0.66
RSC8	YFR037C	GTT3	P39996	337 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	ALD2	P47771	506 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	MDG1	P53885	366 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	RLF2	Q12495	606 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	UGA2	P38067	497 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	SSF1	P38789	453 aa	Predicted RBP	10.92	□□□□□ -0.66
RSC8	YFR037C	PHM7	Q12252	991 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	NCB2	Q92317	146 aa		10.92	□□□□□ -0.66
RSC8	YFR037C	ARG8	P18544	423 aa		10.91	□□□□□ -0.66
RSC8	YFR037C	VAS1	P07806	1104 aa	Known RBP	10.89	□□□□□ -0.67
RSC8	YFR037C	VPS24	P36095	224 aa	Known RBP	10.89	□□□□□ -0.67
RSC8	YFR037C	LSP1	Q12230	341 aa	Known RBP	10.89	□□□□□ -0.67
RSC8	YFR037C	HXT13	P39924	564 aa		10.89	□□□□□ -0.67
RSC8	YFR037C	CTH1	P47976	325 aa		10.89	□□□□□ -0.67
RSC8	YFR037C	SSA2	P10592	639 aa	Known RBP	10.88	□□□□□ -0.67
RSC8	YFR037C	SRS2	P12954	1174 aa		10.88	□□□□□ -0.67
RSC8	YFR037C	ECM21	P38167	1117 aa	Known RBP	10.88	□□□□□ -0.67
RSC8	YFR037C	MSB4	Q12317	492 aa		10.88	□□□□□ -0.67
RSC8	YFR037C	NOT3	P06102	836 aa	Known RBP	10.87	□□□□□ -0.67
RSC8	YFR037C	HXT17	P53631	564 aa		10.87	□□□□□ -0.67
RSC8	YFR037C	PDR18	P53756	1333 aa		10.87	□□□□□ -0.67
RSC8	YFR037C	PKH1	Q03407	766 aa		10.87	□□□□□ -0.67
RSC8	YFR037C	DCD1	P06773	312 aa		10.86	□□□□□ -0.67
RSC8	YFR037C	MNN4	P36044	1178 aa		10.86	□□□□□ -0.67
RSC8	YFR037C	ITC1	P53125	1264 aa		10.86	□□□□□ -0.67
RSC8	YFR037C	DJP1	P40564	432 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	MTC5	Q03897	1148 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	HXT10	P43581	546 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	TEA1	P47988	759 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	FCP1	Q03254	732 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	PSH1	Q12161	406 aa		10.85	□□□□□ -0.67
RSC8	YFR037C	MLC1	P53141	149 aa		10.84	□□□□□ -0.67
RSC8	YFR037C	BRE1	Q07457	700 aa	Known RBP	10.84	□□□□□ -0.67
RSC8	YFR037C	YGL242C	P53066	181 aa		10.83	□□□□□ -0.68
RSC8	YFR037C	BDF1	P35817	686 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	SLN1	P39928	1220 aa	Predicted RBP	10.82	□□□□□ -0.68
RSC8	YFR037C	YGL082W	P53155	381 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	MRPS35	P53292	345 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	RIM20	Q12033	661 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	SUP35	P05453	685 aa	Known RBP	10.82	□□□□□ -0.68
RSC8	YFR037C	RNR2	P09938	399 aa	Known RBP	10.82	□□□□□ -0.68
RSC8	YFR037C	MSP1	P28737	362 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	KTR3	P38130	404 aa	Predicted RBP	10.82	□□□□□ -0.68
RSC8	YFR037C	RMD1	Q03441	430 aa		10.82	□□□□□ -0.68
RSC8	YFR037C	GRE2	Q12068	342 aa	Known RBP	10.82	□□□□□ -0.68
RSC8	YFR037C	SAC3	P46674	1301 aa		10.81	□□□□□ -0.68
RSC8	YFR037C	TRL1	P09880	827 aa	Known RBP	10.81	□□□□□ -0.68
RSC8	YFR037C	AAP1	P37898	856 aa	Known RBP	10.81	□□□□□ -0.68
RSC8	YFR037C	ALO1	P54783	526 aa	Known RBP	10.81	□□□□□ -0.68
RSC8	YFR037C	SER1	P33330	395 aa	Known RBP	10.8	□□□□□ -0.68
RSC8	YFR037C	SLA1	P32790	1244 aa		10.79	□□□□□ -0.68
RSC8	YFR037C	RPG1	P38249	964 aa	Known RBP	10.79	□□□□□ -0.68
RSC8	YFR037C	FPR4	Q06205	392 aa	Predicted RBP	10.79	□□□□□ -0.68
RSC8	YFR037C	GYP5	Q12344	894 aa		10.79	□□□□□ -0.68
RSC8	YFR037C	ALD3	P54114	506 aa		10.79	□□□□□ -0.68
RSC8	YFR037C	BUG1	Q12191	341 aa		10.79	□□□□□ -0.68
RSC8	YFR037C	NYV1	Q12255	253 aa		10.79	□□□□□ -0.68
RSC8	YFR037C	NPA3	P47122	385 aa		10.77	□□□□□ -0.69
RSC8	YFR037C	SSK22	P25390	1331 aa	Predicted RBP	10.77	□□□□□ -0.69
RSC8	YFR037C	KTR1	P27810	393 aa	Known RBP	10.76	□□□□□ -0.69
RSC8	YFR037C	UBP16	Q02863	499 aa		10.76	□□□□□ -0.69
RSC8	YFR037C	VPS20	Q04272	221 aa		10.76	□□□□□ -0.69
RSC8	YFR037C	SNU66	Q12420	587 aa	Predicted RBP	10.76	□□□□□ -0.69
RSC8	YFR037C	EPS1	P40557	701 aa		10.75	□□□□□ -0.69
RSC8	YFR037C	AI2	P03876	854 aa		10.74	□□□□□ -0.69
RSC8	YFR037C	PIB2	P53191	635 aa		10.74	□□□□□ -0.69
RSC8	YFR037C	SEC18	P18759	758 aa	Known RBP	10.73	□□□□□ -0.69
RSC8	YFR037C	AIM9	P40053	627 aa	Known RBP	10.73	□□□□□ -0.69
RSC8	YFR037C	UTP22	P53254	1237 aa	Predicted RBP	10.73	□□□□□ -0.69
RSC8	YFR037C	HAT1	Q12341	374 aa		10.73	□□□□□ -0.69
RSC8	YFR037C	ARL1	P38116	183 aa	Known RBP	10.73	□□□□□ -0.69
RSC8	YFR037C	STM1	P39015	273 aa	Known RBP	10.73	□□□□□ -0.69
RSC8	YFR037C	HAP5	Q02516	242 aa		10.73	□□□□□ -0.69
RSC8	YFR037C	ADR1	P07248	1323 aa		10.72	□□□□□ -0.69
RSC8	YFR037C	TOS1	P38288	455 aa		10.72	□□□□□ -0.69
RSC8	YFR037C	RPN7	Q06103	429 aa	Known RBP	10.72	□□□□□ -0.69
RSC8	YFR037C	LEO1	P38439	464 aa		10.71	□□□□□ -0.69
RSC8	YFR037C	OSH3	P38713	996 aa	Known RBP	10.71	□□□□□ -0.69
RSC8	YFR037C	BDH2	P39713	417 aa		10.71	□□□□□ -0.69
RSC8	YFR037C	TPM1	P17536	199 aa	Known RBP	10.7	□□□□□ -0.7
RSC8	YFR037C	SPO22	P40511	975 aa		10.7	□□□□□ -0.7
RSC8	YFR037C	KRI1	P42846	591 aa	Known RBP	10.7	□□□□□ -0.7
RSC8	YFR037C	YNL193W	P53870	558 aa		10.7	□□□□□ -0.7
RSC8	YFR037C	HST1	P53685	503 aa		10.69	□□□□□ -0.7
RSC8	YFR037C	HPC2	Q01448	625 aa		10.69	□□□□□ -0.7
RSC8	YFR037C	COG8	Q04632	607 aa		10.69	□□□□□ -0.7
RSC8	YFR037C	HRQ1	Q05549	1077 aa		10.69	□□□□□ -0.7
RSC8	YFR037C	BIK1	P11709	440 aa		10.69	□□□□□ -0.7
RSC8	YFR037C	KNS1	P32350	737 aa	Predicted RBP	10.69	□□□□□ -0.7
RSC8	YFR037C	PBY1	P38254	753 aa		10.69	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms