RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W RRP15Q06511 250 aaPredicted RBP7.01□□□□□ -1.29
DEG1YFL001W OPT2Q06593 877 aa7.01□□□□□ -1.29
DEG1YFL001W GAS4Q08271 471 aa7.01□□□□□ -1.29
DEG1YFL001W GRS1P38088 690 aaKnown RBP7.01□□□□□ -1.29
DEG1YFL001W PPX1P38698 397 aa7.01□□□□□ -1.29
DEG1YFL001W ATG1P53104 897 aa7.01□□□□□ -1.29
DEG1YFL001W PNP1Q05788 311 aa7.01□□□□□ -1.29
DEG1YFL001W TSC13Q99190 310 aa7.01□□□□□ -1.29
DEG1YFL001W SRS2P12954 1174 aa7□□□□□ -1.29
DEG1YFL001W UGA3P26370 528 aa7□□□□□ -1.29
DEG1YFL001W HXT10P43581 546 aa7□□□□□ -1.29
DEG1YFL001W ALD2P47771 506 aa7□□□□□ -1.29
DEG1YFL001W PTK2P47116 818 aaKnown RBP6.99□□□□□ -1.29
DEG1YFL001W YGR035CP53222 116 aa6.99□□□□□ -1.29
DEG1YFL001W BOL3P39724 118 aa6.98□□□□□ -1.29
DEG1YFL001W PUN1Q06991 263 aa6.98□□□□□ -1.29
DEG1YFL001W VAC17P25591 423 aa6.97□□□□□ -1.29
DEG1YFL001W GLY1P37303 387 aaKnown RBP6.97□□□□□ -1.29
DEG1YFL001W POL32P47110 350 aa6.97□□□□□ -1.29
DEG1YFL001W SRF1Q12516 437 aa6.97□□□□□ -1.29
DEG1YFL001W ATE1P16639 503 aa6.96□□□□□ -1.3
DEG1YFL001W PDI1P17967 522 aaKnown RBP6.96□□□□□ -1.3
DEG1YFL001W WHI5Q12416 295 aa6.96□□□□□ -1.3
DEG1YFL001W FUR4P05316 633 aaKnown RBP6.95□□□□□ -1.3
DEG1YFL001W VAN1P23642 535 aa6.95□□□□□ -1.3
DEG1YFL001W ACF4P47129 309 aa6.95□□□□□ -1.3
DEG1YFL001W IXR1P33417 597 aa6.94□□□□□ -1.3
DEG1YFL001W HAL5P38970 855 aaKnown RBP6.94□□□□□ -1.3
DEG1YFL001W YFL034WP43564 1073 aa6.94□□□□□ -1.3
DEG1YFL001W TRS33Q99394 268 aa6.94□□□□□ -1.3
DEG1YFL001W YIR007WP40566 764 aa6.93□□□□□ -1.3
DEG1YFL001W NUP85P46673 744 aa6.93□□□□□ -1.3
DEG1YFL001W HPF1Q05164 967 aa6.93□□□□□ -1.3
DEG1YFL001W SVF1Q05515 481 aa6.93□□□□□ -1.3
DEG1YFL001W NUT2Q06213 157 aa6.93□□□□□ -1.3
DEG1YFL001W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
DEG1YFL001W GLO3P38682 493 aaKnown RBP6.92□□□□□ -1.3
DEG1YFL001W RTT106P40161 455 aa6.92□□□□□ -1.3
DEG1YFL001W QDR1P40475 563 aa6.92□□□□□ -1.3
DEG1YFL001W ISR1Q06098 443 aaKnown RBP6.92□□□□□ -1.3
DEG1YFL001W MIP1P15801 1254 aa6.91□□□□□ -1.3
DEG1YFL001W NAP1P25293 417 aaKnown RBP6.91□□□□□ -1.3
DEG1YFL001W AIM9P40053 627 aaKnown RBP6.91□□□□□ -1.3
DEG1YFL001W THI12P42883 340 aa6.91□□□□□ -1.3
DEG1YFL001W THI5P43534 340 aa6.91□□□□□ -1.3
DEG1YFL001W ALD4P46367 519 aaKnown RBP6.91□□□□□ -1.3
DEG1YFL001W THI11P47183 340 aa6.91□□□□□ -1.3
DEG1YFL001W SCW11P53189 542 aa6.91□□□□□ -1.3
DEG1YFL001W THI13Q07748 340 aa6.91□□□□□ -1.3
DEG1YFL001W LSO1Q3E827 93 aa6.91□□□□□ -1.3
DEG1YFL001W UBP1P25037 809 aa6.9□□□□□ -1.3
DEG1YFL001W HDA3Q06623 655 aa6.9□□□□□ -1.3
DEG1YFL001W FRT1Q99332 602 aa6.9□□□□□ -1.3
DEG1YFL001W SUV3P32580 737 aa6.89□□□□□ -1.31
DEG1YFL001W MRT4P33201 236 aaKnown RBP6.89□□□□□ -1.31
DEG1YFL001W STB3Q12427 513 aa6.89□□□□□ -1.31
DEG1YFL001W YTA7P40340 1379 aa6.89□□□□□ -1.31
DEG1YFL001W KIP2P28743 706 aa6.88□□□□□ -1.31
DEG1YFL001W NTH2P35172 780 aa6.88□□□□□ -1.31
DEG1YFL001W OCA5P38738 679 aa6.88□□□□□ -1.31
DEG1YFL001W ATG20Q07528 640 aa6.88□□□□□ -1.31
DEG1YFL001W TY1A-BLQ12266 440 aa6.88□□□□□ -1.31
DEG1YFL001W SEC8P32855 1065 aa6.87□□□□□ -1.31
DEG1YFL001W MGE1P38523 228 aa6.87□□□□□ -1.31
DEG1YFL001W YJR107WP47145 328 aa6.87□□□□□ -1.31
DEG1YFL001W OYE2Q03558 400 aaKnown RBP6.87□□□□□ -1.31
DEG1YFL001W MET4P32389 672 aa6.86□□□□□ -1.31
DEG1YFL001W CWH41P53008 833 aa6.86□□□□□ -1.31
DEG1YFL001W CYT1P07143 309 aa6.85□□□□□ -1.31
DEG1YFL001W NGR1P32831 672 aaKnown RBP6.85□□□□□ -1.31
DEG1YFL001W SPR3P41901 512 aa6.85□□□□□ -1.31
DEG1YFL001W RPS6AP0CX37 236 aaKnown RBP6.84□□□□□ -1.31
DEG1YFL001W RPS6BP0CX38 236 aaPredicted RBP6.84□□□□□ -1.31
DEG1YFL001W BOI1P38041 980 aaKnown RBP6.84□□□□□ -1.31
DEG1YFL001W ICP55P40051 511 aa6.83□□□□□ -1.32
DEG1YFL001W SPT2P06843 333 aaPredicted RBP6.82□□□□□ -1.32
DEG1YFL001W TRS120Q04183 1289 aa6.82□□□□□ -1.32
DEG1YFL001W SWI5P08153 709 aa6.81□□□□□ -1.32
DEG1YFL001W YBR197CP38306 217 aa6.81□□□□□ -1.32
DEG1YFL001W EMW1P42842 904 aaKnown RBP6.81□□□□□ -1.32
DEG1YFL001W NNF1P47149 201 aa6.81□□□□□ -1.32
DEG1YFL001W MET1P36150 593 aa6.8□□□□□ -1.32
DEG1YFL001W APC11Q12157 165 aa6.8□□□□□ -1.32
DEG1YFL001W UTR2P32623 467 aa6.79□□□□□ -1.32
DEG1YFL001W ISC10P32645 267 aa6.79□□□□□ -1.32
DEG1YFL001W LSC2P53312 427 aa6.79□□□□□ -1.32
DEG1YFL001W UBP2Q01476 1272 aa6.79□□□□□ -1.32
DEG1YFL001W IOC4Q04213 475 aa6.79□□□□□ -1.32
DEG1YFL001W GPI13Q07830 1017 aa6.79□□□□□ -1.32
DEG1YFL001W ARG82P07250 355 aa6.78□□□□□ -1.32
DEG1YFL001W LSB3P43603 459 aaKnown RBP6.78□□□□□ -1.32
DEG1YFL001W ISU1Q03020 165 aa6.78□□□□□ -1.32
DEG1YFL001W CAB1Q04430 367 aa6.78□□□□□ -1.32
DEG1YFL001W JIP5Q06214 492 aaPredicted RBP6.78□□□□□ -1.32
DEG1YFL001W PUS1Q12211 544 aaKnown RBP6.78□□□□□ -1.32
DEG1YFL001W PHO4P07270 312 aaKnown RBP6.77□□□□□ -1.32
DEG1YFL001W FYV10P40492 516 aa6.77□□□□□ -1.32
DEG1YFL001W UFD2P54860 961 aa6.77□□□□□ -1.32
DEG1YFL001W MAG2Q06436 670 aaKnown RBP6.77□□□□□ -1.32
DEG1YFL001W MNL2Q12205 849 aa6.77□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms