RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C VAC17P25591 423 aa1.95□□□□□ -2.1
SWI4YER111C UTR2P32623 467 aa1.95□□□□□ -2.1
SWI4YER111C ISC10P32645 267 aa1.95□□□□□ -2.1
SWI4YER111C MKS1P34072 584 aa1.94□□□□□ -2.1
SWI4YER111C MAD1P40957 749 aa1.94□□□□□ -2.1
SWI4YER111C FRK1Q03002 865 aaPredicted RBP1.94□□□□□ -2.1
SWI4YER111C ACF4P47129 309 aa1.94□□□□□ -2.1
SWI4YER111C SUT1P53032 299 aaKnown RBP1.94□□□□□ -2.1
SWI4YER111C CWC24P53769 259 aa1.94□□□□□ -2.1
SWI4YER111C YPR015CQ12531 247 aa1.94□□□□□ -2.1
SWI4YER111C SWR1Q05471 1514 aa1.94□□□□□ -2.1
SWI4YER111C SPT2P06843 333 aaPredicted RBP1.93□□□□□ -2.1
SWI4YER111C MCM2P29469 868 aa1.93□□□□□ -2.1
SWI4YER111C MET1P36150 593 aa1.93□□□□□ -2.1
SWI4YER111C BDS1Q08347 646 aa1.93□□□□□ -2.1
SWI4YER111C SWI5P08153 709 aa1.93□□□□□ -2.1
SWI4YER111C RRD1P40454 393 aaKnown RBP1.93□□□□□ -2.1
SWI4YER111C DFG5Q05031 458 aa1.93□□□□□ -2.1
SWI4YER111C WHI5Q12416 295 aa1.93□□□□□ -2.1
SWI4YER111C FRT1Q99332 602 aa1.93□□□□□ -2.1
SWI4YER111C RPP2BP02400 110 aaKnown RBP1.93□□□□□ -2.1
SWI4YER111C PPX1P38698 397 aa1.93□□□□□ -2.1
SWI4YER111C NNF1P47149 201 aa1.93□□□□□ -2.1
SWI4YER111C ORC1P54784 914 aaPredicted RBP1.93□□□□□ -2.1
SWI4YER111C UTP7P40055 554 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C ALA1P40825 983 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C SPR3P41901 512 aa1.92□□□□□ -2.1
SWI4YER111C SYH1Q02875 849 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C MRF1P30775 413 aaPredicted RBP1.92□□□□□ -2.1
SWI4YER111C RPT1P33299 467 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C BOI1P38041 980 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C YBR197CP38306 217 aa1.92□□□□□ -2.1
SWI4YER111C VAC8P39968 578 aa1.92□□□□□ -2.1
SWI4YER111C APL6P46682 809 aa1.92□□□□□ -2.1
SWI4YER111C BMT6Q12291 365 aa1.92□□□□□ -2.1
SWI4YER111C LSO1Q3E827 93 aa1.92□□□□□ -2.1
SWI4YER111C DLD3P39976 496 aaKnown RBP1.92□□□□□ -2.1
SWI4YER111C FKH1P40466 484 aa1.92□□□□□ -2.1
SWI4YER111C RPB10P22139 70 aa1.91□□□□□ -2.1
SWI4YER111C SUV3P32580 737 aa1.91□□□□□ -2.1
SWI4YER111C SRP40P32583 406 aaPredicted RBP1.91□□□□□ -2.1
SWI4YER111C BRN1P38170 754 aa1.91□□□□□ -2.1
SWI4YER111C PRE3P38624 215 aa1.91□□□□□ -2.1
SWI4YER111C ALD6P54115 500 aaKnown RBP1.91□□□□□ -2.1
SWI4YER111C ISU1Q03020 165 aa1.91□□□□□ -2.1
SWI4YER111C SAS4Q04003 481 aa1.91□□□□□ -2.1
SWI4YER111C TRS120Q04183 1289 aa1.91□□□□□ -2.1
SWI4YER111C YML082WQ04533 649 aaKnown RBP1.91□□□□□ -2.1
SWI4YER111C OXR1Q08952 273 aa1.91□□□□□ -2.1
SWI4YER111C WTM2Q12206 467 aa1.91□□□□□ -2.1
SWI4YER111C MET4P32389 672 aa1.91□□□□□ -2.1
SWI4YER111C RPS26AP39938 119 aaKnown RBP1.91□□□□□ -2.1
SWI4YER111C RPS26BP39939 119 aaKnown RBP1.91□□□□□ -2.1
SWI4YER111C FYV10P40492 516 aa1.91□□□□□ -2.1
SWI4YER111C SPR28Q04921 423 aa1.91□□□□□ -2.1
SWI4YER111C NGR1P32831 672 aaKnown RBP1.9□□□□□ -2.1
SWI4YER111C PPG1P32838 368 aa1.9□□□□□ -2.1
SWI4YER111C EMW1P42842 904 aaKnown RBP1.9□□□□□ -2.1
SWI4YER111C BDP1P46678 594 aa1.9□□□□□ -2.1
SWI4YER111C RRP15Q06511 250 aaPredicted RBP1.9□□□□□ -2.1
SWI4YER111C WRS1Q12109 432 aaKnown RBP1.9□□□□□ -2.1
SWI4YER111C YTA7P40340 1379 aa1.9□□□□□ -2.1
SWI4YER111C CHL1P22516 861 aaPredicted RBP1.9□□□□□ -2.11
SWI4YER111C NAP1P25293 417 aaKnown RBP1.9□□□□□ -2.11
SWI4YER111C FBP26P32604 452 aa1.9□□□□□ -2.11
SWI4YER111C FIR1P40020 876 aa1.9□□□□□ -2.11
SWI4YER111C MNL2Q12205 849 aa1.9□□□□□ -2.11
SWI4YER111C MOD5P07884 428 aa1.9□□□□□ -2.11
SWI4YER111C TPD3P31383 635 aa1.9□□□□□ -2.11
SWI4YER111C GCD6P32501 712 aaKnown RBP1.9□□□□□ -2.11
SWI4YER111C ECM2P38241 364 aaKnown RBP1.9□□□□□ -2.11
SWI4YER111C UFD2P54860 961 aa1.9□□□□□ -2.11
SWI4YER111C Q0182Q9ZZW1 134 aa1.9□□□□□ -2.11
SWI4YER111C PRE9P23638 258 aaKnown RBP1.89□□□□□ -2.11
SWI4YER111C YKL091CP33324 310 aaKnown RBP1.89□□□□□ -2.11
SWI4YER111C LDH1P38139 375 aa1.89□□□□□ -2.11
SWI4YER111C YTA6P40328 754 aa1.89□□□□□ -2.11
SWI4YER111C SAM37P50110 327 aa1.89□□□□□ -2.11
SWI4YER111C AIR2Q12476 344 aaKnown RBP1.89□□□□□ -2.11
SWI4YER111C CLN2P20438 545 aa1.89□□□□□ -2.11
SWI4YER111C YHL008CP38750 627 aa1.89□□□□□ -2.11
SWI4YER111C IOC4Q04213 475 aa1.89□□□□□ -2.11
SWI4YER111C NOC3Q07896 663 aaPredicted RBP1.89□□□□□ -2.11
SWI4YER111C PHO4P07270 312 aaKnown RBP1.88□□□□□ -2.11
SWI4YER111C UBP1P25037 809 aa1.88□□□□□ -2.11
SWI4YER111C SMC1P32908 1225 aa1.88□□□□□ -2.11
SWI4YER111C VRP1P37370 817 aa1.88□□□□□ -2.11
SWI4YER111C CIC1P38779 376 aaKnown RBP1.88□□□□□ -2.11
SWI4YER111C RGA1P39083 1007 aa1.88□□□□□ -2.11
SWI4YER111C CST6P40535 587 aa1.88□□□□□ -2.11
SWI4YER111C DAK2P43550 591 aa1.88□□□□□ -2.11
SWI4YER111C YJR107WP47145 328 aa1.88□□□□□ -2.11
SWI4YER111C YNL011CP53980 444 aa1.88□□□□□ -2.11
SWI4YER111C ALD3P54114 506 aa1.88□□□□□ -2.11
SWI4YER111C CAB1Q04430 367 aa1.88□□□□□ -2.11
SWI4YER111C GPI13Q07830 1017 aa1.88□□□□□ -2.11
SWI4YER111C STB3Q12427 513 aa1.88□□□□□ -2.11
SWI4YER111C YOL098CQ12496 1037 aa1.88□□□□□ -2.11
SWI4YER111C MRPL33P20084 86 aa1.88□□□□□ -2.11
SWI4YER111C RNH70P53331 553 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms