RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A NAF1P53919 492 aaKnown RBP4.29□□□□□ -1.72
YER088C-AYER088C-A SPT2P06843 333 aaPredicted RBP4.28□□□□□ -1.72
YER088C-AYER088C-A AIM7Q12156 149 aa4.28□□□□□ -1.72
YER088C-AYER088C-A PDC5P16467 563 aaKnown RBP4.27□□□□□ -1.73
YER088C-AYER088C-A DAT1P13483 248 aaKnown RBP4.26□□□□□ -1.73
YER088C-AYER088C-A UTR2P32623 467 aa4.26□□□□□ -1.73
YER088C-AYER088C-A MRX12P47084 519 aa4.26□□□□□ -1.73
YER088C-AYER088C-A TBS1P38114 1094 aa4.25□□□□□ -1.73
YER088C-AYER088C-A ALA1P40825 983 aaKnown RBP4.25□□□□□ -1.73
YER088C-AYER088C-A JJJ2P46997 583 aa4.25□□□□□ -1.73
YER088C-AYER088C-A IRE1P32361 1115 aa4.24□□□□□ -1.73
YER088C-AYER088C-A YPL034WQ03083 165 aa4.24□□□□□ -1.73
YER088C-AYER088C-A ISR1Q06098 443 aaKnown RBP4.24□□□□□ -1.73
YER088C-AYER088C-A MRPL16P38064 232 aa4.23□□□□□ -1.73
YER088C-AYER088C-A UTP7P40055 554 aaKnown RBP4.23□□□□□ -1.73
YER088C-AYER088C-A SUM1P46676 1062 aa4.23□□□□□ -1.73
YER088C-AYER088C-A RPP1AP05318 106 aaPredicted RBP4.22□□□□□ -1.73
YER088C-AYER088C-A APL6P46682 809 aa4.22□□□□□ -1.73
YER088C-AYER088C-A PRY1P47032 299 aa4.22□□□□□ -1.73
YER088C-AYER088C-A ALO1P54783 526 aaKnown RBP4.22□□□□□ -1.73
YER088C-AYER088C-A STB3Q12427 513 aa4.22□□□□□ -1.73
YER088C-AYER088C-A OMA1P36163 345 aa4.21□□□□□ -1.74
YER088C-AYER088C-A INP52P50942 1183 aa4.21□□□□□ -1.74
YER088C-AYER088C-A TY1A-DR2Q03964 440 aaKnown RBP4.21□□□□□ -1.74
YER088C-AYER088C-A SSA2P10592 639 aaKnown RBP4.2□□□□□ -1.74
YER088C-AYER088C-A PDC6P26263 563 aaKnown RBP4.2□□□□□ -1.74
YER088C-AYER088C-A PSH1Q12161 406 aa4.2□□□□□ -1.74
YER088C-AYER088C-A SHM1P37292 490 aaPredicted RBP4.19□□□□□ -1.74
YER088C-AYER088C-A TPS3P38426 1054 aaKnown RBP4.19□□□□□ -1.74
YER088C-AYER088C-A SPR3P41901 512 aa4.19□□□□□ -1.74
YER088C-AYER088C-A EMP47P43555 445 aa4.17□□□□□ -1.74
YER088C-AYER088C-A HAL5P38970 855 aaKnown RBP4.16□□□□□ -1.74
YER088C-AYER088C-A SLX8P40072 274 aa4.16□□□□□ -1.74
YER088C-AYER088C-A DMA1P38823 416 aa4.15□□□□□ -1.75
YER088C-AYER088C-A MCM16Q12262 181 aa4.15□□□□□ -1.75
YER088C-AYER088C-A NHA1Q99271 985 aa4.15□□□□□ -1.75
YER088C-AYER088C-A SPT5P27692 1063 aaKnown RBP4.14□□□□□ -1.75
YER088C-AYER088C-A CSE4P36012 229 aa4.14□□□□□ -1.75
YER088C-AYER088C-A UTP13Q05946 817 aaKnown RBP4.14□□□□□ -1.75
YER088C-AYER088C-A LEU1P07264 779 aaKnown RBP4.13□□□□□ -1.75
YER088C-AYER088C-A MSC7P38694 644 aa4.13□□□□□ -1.75
YER088C-AYER088C-A ATG3P40344 310 aa4.13□□□□□ -1.75
YER088C-AYER088C-A AVT1P47082 602 aa4.13□□□□□ -1.75
YER088C-AYER088C-A BUD9P53226 547 aa4.13□□□□□ -1.75
YER088C-AYER088C-A ISF1P32488 338 aa4.12□□□□□ -1.75
YER088C-AYER088C-A PGM1P33401 570 aaKnown RBP4.12□□□□□ -1.75
YER088C-AYER088C-A HDA3Q06623 655 aa4.12□□□□□ -1.75
YER088C-AYER088C-A RPS31P05759 152 aaKnown RBP4.11□□□□□ -1.75
YER088C-AYER088C-A PGM2P37012 569 aaKnown RBP4.11□□□□□ -1.75
YER088C-AYER088C-A ALG14P38242 237 aa4.11□□□□□ -1.75
YER088C-AYER088C-A HPC2Q01448 625 aa4.11□□□□□ -1.75
YER088C-AYER088C-A AI3P03877 415 aa4.1□□□□□ -1.75
YER088C-AYER088C-A YPQ2Q06328 317 aa4.1□□□□□ -1.75
YER088C-AYER088C-A AOS1Q06624 347 aa4.1□□□□□ -1.75
YER088C-AYER088C-A RGP1P16664 663 aa4.09□□□□□ -1.75
YER088C-AYER088C-A NAB2P32505 525 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
YER088C-AYER088C-A SOH1P38633 127 aa4.09□□□□□ -1.75
YER088C-AYER088C-A YTA6P40328 754 aa4.09□□□□□ -1.75
YER088C-AYER088C-A ALD2P47771 506 aa4.09□□□□□ -1.75
YER088C-AYER088C-A HEH2Q03281 663 aa4.09□□□□□ -1.75
YER088C-AYER088C-A TFB3Q03290 321 aa4.09□□□□□ -1.75
YER088C-AYER088C-A RQC2Q12532 1038 aaKnown RBP4.08□□□□□ -1.76
YER088C-AYER088C-A SAC7P17121 654 aa4.07□□□□□ -1.76
YER088C-AYER088C-A YPP1P46951 817 aa4.07□□□□□ -1.76
YER088C-AYER088C-A ARI1P53111 347 aaKnown RBP4.07□□□□□ -1.76
YER088C-AYER088C-A MED7Q08278 222 aa4.07□□□□□ -1.76
YER088C-AYER088C-A SWI5P08153 709 aa4.05□□□□□ -1.76
YER088C-AYER088C-A MCM1P11746 286 aa4.05□□□□□ -1.76
YER088C-AYER088C-A NAR1P23503 491 aaKnown RBP4.05□□□□□ -1.76
YER088C-AYER088C-A COQ2P32378 372 aa4.05□□□□□ -1.76
YER088C-AYER088C-A ELM1P32801 640 aa4.05□□□□□ -1.76
YER088C-AYER088C-A GIS4Q04233 774 aa4.05□□□□□ -1.76
YER088C-AYER088C-A SFA1P32771 386 aa4.04□□□□□ -1.76
YER088C-AYER088C-A KAE1P36132 386 aa4.04□□□□□ -1.76
YER088C-AYER088C-A YKR073CP36153 106 aa4.04□□□□□ -1.76
YER088C-AYER088C-A PRK1P40494 810 aa4.04□□□□□ -1.76
YER088C-AYER088C-A YDJ1P25491 409 aaKnown RBP4.03□□□□□ -1.76
YER088C-AYER088C-A LIP5P32875 414 aa4.03□□□□□ -1.76
YER088C-AYER088C-A YBL036CP38197 257 aa4.03□□□□□ -1.76
YER088C-AYER088C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
YER088C-AYER088C-A RRM3P38766 723 aa4.02□□□□□ -1.77
YER088C-AYER088C-A AIM9P40053 627 aaKnown RBP4.02□□□□□ -1.77
YER088C-AYER088C-A TRP3P00937 484 aa4.01□□□□□ -1.77
YER088C-AYER088C-A MLF3P32047 452 aa4.01□□□□□ -1.77
YER088C-AYER088C-A NCL1P38205 684 aaKnown RBP4.01□□□□□ -1.77
YER088C-AYER088C-A TOS1P38288 455 aa4.01□□□□□ -1.77
YER088C-AYER088C-A YNL165WP53891 406 aa4.01□□□□□ -1.77
YER088C-AYER088C-A GAS5Q08193 484 aa4.01□□□□□ -1.77
YER088C-AYER088C-A YLR122CQ12312 125 aa4.01□□□□□ -1.77
YER088C-AYER088C-A PUB1P32588 453 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
YER088C-AYER088C-A YFL034WP43564 1073 aa4□□□□□ -1.77
YER088C-AYER088C-A RPS6AP0CX37 236 aaKnown RBP3.99□□□□□ -1.77
YER088C-AYER088C-A RPS6BP0CX38 236 aaPredicted RBP3.99□□□□□ -1.77
YER088C-AYER088C-A KIN1P13185 1064 aa3.99□□□□□ -1.77
YER088C-AYER088C-A SKP1P52286 194 aa3.98□□□□□ -1.77
YER088C-AYER088C-A BRE4Q07660 1125 aa3.98□□□□□ -1.77
YER088C-AYER088C-A SLP1Q12232 587 aa3.98□□□□□ -1.77
YER088C-AYER088C-A RSC6P25632 483 aa3.97□□□□□ -1.77
YER088C-AYER088C-A CTH1P47976 325 aa3.97□□□□□ -1.77
YER088C-AYER088C-A CHS2P14180 963 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms