RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOM1	YDR457W	YNL247W	P53852	767 aa	Known RBP	3.07	□□□□□ -1.92
TOM1	YDR457W	PRP31	P49704	494 aa	Predicted RBP	3.07	□□□□□ -1.92
TOM1	YDR457W	SEC39	Q12745	709 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	CCL1	P37366	393 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	RIO2	P40160	425 aa	Known RBP	3.07	□□□□□ -1.92
TOM1	YDR457W	FCP1	Q03254	732 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	RGP1	P16664	663 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	EXO84	P38261	753 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	RTC4	P53850	401 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	SPE2	P21182	396 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	JNM1	P36224	373 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	SDA1	P53313	767 aa	Known RBP	3.07	□□□□□ -1.92
TOM1	YDR457W	CNM67	P53865	581 aa	Known RBP	3.07	□□□□□ -1.92
TOM1	YDR457W	SPO20	Q04359	397 aa		3.07	□□□□□ -1.92
TOM1	YDR457W	ILM1	P47155	203 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	YLL054C	Q12244	843 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	SKI3	P17883	1432 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	FES1	P38260	290 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	ALG2	P43636	503 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	ASE1	P50275	885 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	RPC19	P28000	142 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	NPL6	P32832	435 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	TAN1	P53072	289 aa	Predicted RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	GIM3	P53900	129 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	UTP5	Q04177	643 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	SSE2	P32590	693 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	VPS21	P36017	210 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	YKL023W	P36103	277 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	ASI3	P53983	676 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	RIX7	Q07844	837 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	SBP1	P10080	294 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	KIN3	P22209	435 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	PRP40	P33203	583 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	RRM3	P38766	723 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	OM45	P16547	393 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	NUG1	P40010	520 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	RSC8	P43609	557 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	YMR226C	Q05016	267 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	YLR287C	Q05881	355 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	LCB5	Q06147	687 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	SHE4	P51534	789 aa		3.06	□□□□□ -1.92
TOM1	YDR457W	CPR6	P53691	371 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	YNR021W	P53723	404 aa	Known RBP	3.06	□□□□□ -1.92
TOM1	YDR457W	SNF7	P39929	240 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
TOM1	YDR457W	TAF8	Q03750	510 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	YSH1	Q06224	779 aa	Predicted RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	RPL19A	P0CX82	189 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	RPL19B	P0CX83	189 aa	Predicted RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	SHQ1	P40486	507 aa	Predicted RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	TFB3	Q03290	321 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	ADF1	Q2V2Q1	113 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	CLB4	P24871	460 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	YEL043W	P32618	956 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	MET18	P40469	1032 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	EMW1	P42842	904 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	NOP12	Q08208	459 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	PSK2	Q08217	1101 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	MDV1	P47025	714 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	VMA8	P32610	256 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	SEC31	P38968	1273 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	UTP13	Q05946	817 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	EFB1	P32471	206 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	SSZ1	P38788	538 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	MEC3	Q02574	474 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	SMD2	Q06217	110 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	AOS1	Q06624	347 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	GAS4	Q08271	471 aa		3.05	□□□□□ -1.92
TOM1	YDR457W	CDC53	Q12018	815 aa	Known RBP	3.05	□□□□□ -1.92
TOM1	YDR457W	CDC8	P00572	216 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	DPS1	P04802	557 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	IMP2'	P32351	346 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	RPT3	P33298	428 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	SPR3	P41901	512 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	YGR237C	P50089	785 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	YKR023W	P36119	530 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	SEC26	P41810	973 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	SMC5	Q08204	1093 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	GRX4	P32642	244 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	RBL2	P48606	106 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	RIA1	P53893	1110 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	CBF2	P32504	956 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	DID4	P36108	232 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	FZO1	P38297	855 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	HFD1	Q04458	532 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	TOM70	P07213	617 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	SWE1	P32944	819 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	VPS3	P23643	1011 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	SEC9	P40357	651 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	CSR1	Q06705	408 aa	Known RBP	3.04	□□□□□ -1.92
TOM1	YDR457W	AIM7	Q12156	149 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	UBP1	P25037	809 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	LAM1	P38851	1228 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	DAS1	P47005	663 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	BRF1	P29056	596 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	MPH1	P40562	993 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	PPN1	Q04119	674 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	ZEO1	Q08245	113 aa		3.04	□□□□□ -1.92
TOM1	YDR457W	GGA2	P38817	585 aa	Known RBP	3.03	□□□□□ -1.92
TOM1	YDR457W	BMS1	Q08965	1183 aa	Known RBP	3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms