RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W SPT2P06843 333 aaPredicted RBP2.56□□□□□ -2
BFR2YDR299W SOH1P38633 127 aa2.56□□□□□ -2
BFR2YDR299W SKN7P38889 622 aa2.56□□□□□ -2
BFR2YDR299W HAL5P38970 855 aaKnown RBP2.56□□□□□ -2
BFR2YDR299W ATG3P40344 310 aa2.56□□□□□ -2
BFR2YDR299W APL6P46682 809 aa2.56□□□□□ -2
BFR2YDR299W SYT1Q06836 1226 aa2.56□□□□□ -2
BFR2YDR299W SLA1P32790 1244 aa2.55□□□□□ -2
BFR2YDR299W SBE2P42223 864 aaKnown RBP2.55□□□□□ -2
BFR2YDR299W SUM1P46676 1062 aa2.55□□□□□ -2
BFR2YDR299W YPP1P46951 817 aa2.55□□□□□ -2
BFR2YDR299W YNR014WP53719 212 aa2.55□□□□□ -2
BFR2YDR299W HPC2Q01448 625 aa2.55□□□□□ -2
BFR2YDR299W TFB3Q03290 321 aa2.55□□□□□ -2
BFR2YDR299W GIS1Q03833 894 aa2.55□□□□□ -2
BFR2YDR299W YDR461C-AQ2V2P7 80 aa2.55□□□□□ -2
BFR2YDR299W BIO2P32451 375 aa2.54□□□□□ -2
BFR2YDR299W JJJ2P46997 583 aa2.54□□□□□ -2
BFR2YDR299W TDA6Q06466 467 aa2.54□□□□□ -2
BFR2YDR299W FPS1P23900 669 aa2.53□□□□□ -2
BFR2YDR299W PKC1P24583 1151 aa2.53□□□□□ -2
BFR2YDR299W IRE1P32361 1115 aa2.53□□□□□ -2
BFR2YDR299W SLX8P40072 274 aa2.53□□□□□ -2
BFR2YDR299W YNL108CP53929 270 aa2.53□□□□□ -2
BFR2YDR299W UTP13Q05946 817 aaKnown RBP2.53□□□□□ -2
BFR2YDR299W HDA3Q06623 655 aa2.53□□□□□ -2
BFR2YDR299W YMR187CQ03236 431 aa2.53□□□□□ -2
BFR2YDR299W SHM1P37292 490 aaPredicted RBP2.52□□□□□ -2.01
BFR2YDR299W IRC24P40580 263 aa2.52□□□□□ -2.01
BFR2YDR299W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
BFR2YDR299W STB3Q12427 513 aa2.52□□□□□ -2.01
BFR2YDR299W ENO2P00925 437 aaKnown RBP2.51□□□□□ -2.01
BFR2YDR299W MRPL16P38064 232 aa2.51□□□□□ -2.01
BFR2YDR299W BOI2P39969 1040 aa2.51□□□□□ -2.01
BFR2YDR299W PSH1Q12161 406 aa2.51□□□□□ -2.01
BFR2YDR299W GLT1Q12680 2145 aaKnown RBP2.51□□□□□ -2.01
BFR2YDR299W GPM1P00950 247 aaKnown RBP2.5□□□□□ -2.01
BFR2YDR299W SUP45P12385 437 aaKnown RBP2.5□□□□□ -2.01
BFR2YDR299W YCK2P23292 546 aaKnown RBP2.5□□□□□ -2.01
BFR2YDR299W PDC6P26263 563 aaKnown RBP2.5□□□□□ -2.01
BFR2YDR299W AIM9P40053 627 aaKnown RBP2.5□□□□□ -2.01
BFR2YDR299W SWI5P08153 709 aa2.5□□□□□ -2.01
BFR2YDR299W MET1P36150 593 aa2.5□□□□□ -2.01
BFR2YDR299W MCX1P38323 520 aaPredicted RBP2.5□□□□□ -2.01
BFR2YDR299W YTA6P40328 754 aa2.5□□□□□ -2.01
BFR2YDR299W YJL007CP47080 104 aa2.5□□□□□ -2.01
BFR2YDR299W RIM21P48565 533 aa2.5□□□□□ -2.01
BFR2YDR299W RPS6AP0CX37 236 aaKnown RBP2.49□□□□□ -2.01
BFR2YDR299W RPS6BP0CX38 236 aaPredicted RBP2.49□□□□□ -2.01
BFR2YDR299W YFL034WP43564 1073 aa2.49□□□□□ -2.01
BFR2YDR299W YPQ2Q06328 317 aa2.48□□□□□ -2.01
BFR2YDR299W RPP1AP05318 106 aaPredicted RBP2.47□□□□□ -2.01
BFR2YDR299W PDC5P16467 563 aaKnown RBP2.47□□□□□ -2.01
BFR2YDR299W KNS1P32350 737 aaPredicted RBP2.47□□□□□ -2.01
BFR2YDR299W TAT1P38085 619 aa2.47□□□□□ -2.01
BFR2YDR299W AMN1P38285 549 aaPredicted RBP2.47□□□□□ -2.01
BFR2YDR299W RPL34BP40525 121 aaKnown RBP2.47□□□□□ -2.01
BFR2YDR299W SPR3P41901 512 aa2.47□□□□□ -2.01
BFR2YDR299W YDR215CQ12240 137 aa2.47□□□□□ -2.01
BFR2YDR299W RPS31P05759 152 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W PDI1P17967 522 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W RDS2P19541 446 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W NTH2P35172 780 aa2.46□□□□□ -2.02
BFR2YDR299W SLN1P39928 1220 aaPredicted RBP2.46□□□□□ -2.02
BFR2YDR299W TY1A-DR2Q03964 440 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W MCA1Q08601 432 aa2.46□□□□□ -2.02
BFR2YDR299W ENO1P00924 437 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W LEU1P07264 779 aaKnown RBP2.46□□□□□ -2.02
BFR2YDR299W MLF3P32047 452 aa2.46□□□□□ -2.02
BFR2YDR299W ALD2P47771 506 aa2.46□□□□□ -2.02
BFR2YDR299W YNL165WP53891 406 aa2.46□□□□□ -2.02
BFR2YDR299W MCM1P11746 286 aa2.45□□□□□ -2.02
BFR2YDR299W RGP1P16664 663 aa2.45□□□□□ -2.02
BFR2YDR299W RTG2P32608 588 aaKnown RBP2.45□□□□□ -2.02
BFR2YDR299W HGH1P48362 394 aaKnown RBP2.45□□□□□ -2.02
BFR2YDR299W Q0182Q9ZZW1 134 aa2.45□□□□□ -2.02
BFR2YDR299W CYT1P07143 309 aa2.44□□□□□ -2.02
BFR2YDR299W TIF1P10081 395 aaKnown RBP2.44□□□□□ -2.02
BFR2YDR299W BIM1P40013 344 aa2.44□□□□□ -2.02
BFR2YDR299W ATG32P40458 529 aa2.44□□□□□ -2.02
BFR2YDR299W KTR7P40504 517 aa2.44□□□□□ -2.02
BFR2YDR299W LSB6P42951 607 aa2.44□□□□□ -2.02
BFR2YDR299W PRY1P47032 299 aa2.44□□□□□ -2.02
BFR2YDR299W MTO1P53070 669 aa2.44□□□□□ -2.02
BFR2YDR299W TSC13Q99190 310 aa2.44□□□□□ -2.02
BFR2YDR299W MAC1P35192 417 aa2.43□□□□□ -2.02
BFR2YDR299W ALG14P38242 237 aa2.43□□□□□ -2.02
BFR2YDR299W MSC7P38694 644 aa2.43□□□□□ -2.02
BFR2YDR299W YPL034WQ03083 165 aa2.43□□□□□ -2.02
BFR2YDR299W MRX10Q05648 414 aa2.43□□□□□ -2.02
BFR2YDR299W NAB2P32505 525 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
BFR2YDR299W PGM2P37012 569 aaKnown RBP2.42□□□□□ -2.02
BFR2YDR299W NHA1Q99271 985 aa2.42□□□□□ -2.02
BFR2YDR299W NCL1P38205 684 aaKnown RBP2.42□□□□□ -2.02
BFR2YDR299W TPS3P38426 1054 aaKnown RBP2.42□□□□□ -2.02
BFR2YDR299W HEH2Q03281 663 aa2.42□□□□□ -2.02
BFR2YDR299W PHO87P25360 923 aa2.41□□□□□ -2.02
BFR2YDR299W CUS1Q02554 436 aaPredicted RBP2.41□□□□□ -2.02
BFR2YDR299W HAP4P14064 554 aa2.4□□□□□ -2.03
BFR2YDR299W SCD5P34758 872 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms