RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W TY1A-GR2Q12485 440 aa4.84□□□□□ -1.63
TRS85YDR108W MLP2P40457 1679 aa4.84□□□□□ -1.64
TRS85YDR108W RAD3P06839 778 aa4.84□□□□□ -1.64
TRS85YDR108W SPT5P27692 1063 aaKnown RBP4.84□□□□□ -1.64
TRS85YDR108W ZUO1P32527 433 aaKnown RBP4.84□□□□□ -1.64
TRS85YDR108W VID30P53076 958 aa4.84□□□□□ -1.64
TRS85YDR108W YGL140CP53120 1219 aa4.84□□□□□ -1.64
TRS85YDR108W DNA2P38859 1522 aa4.83□□□□□ -1.64
TRS85YDR108W SEC2P17065 759 aa4.83□□□□□ -1.64
TRS85YDR108W KAR3P17119 729 aa4.83□□□□□ -1.64
TRS85YDR108W SEC9P40357 651 aa4.83□□□□□ -1.64
TRS85YDR108W CST6P40535 587 aa4.83□□□□□ -1.64
TRS85YDR108W YMR102CQ03177 834 aa4.83□□□□□ -1.64
TRS85YDR108W CDC11P32458 415 aa4.82□□□□□ -1.64
TRS85YDR108W AIR1P40507 360 aaKnown RBP4.82□□□□□ -1.64
TRS85YDR108W PXR1P53335 271 aaPredicted RBP4.82□□□□□ -1.64
TRS85YDR108W SFI1Q12369 946 aa4.82□□□□□ -1.64
TRS85YDR108W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
TRS85YDR108W SEC39Q12745 709 aa4.82□□□□□ -1.64
TRS85YDR108W SCC2Q04002 1493 aa4.82□□□□□ -1.64
TRS85YDR108W REV3P14284 1504 aa4.82□□□□□ -1.64
TRS85YDR108W SIN3P22579 1536 aa4.82□□□□□ -1.64
TRS85YDR108W MCM2P29469 868 aa4.82□□□□□ -1.64
TRS85YDR108W CLA4P48562 842 aa4.82□□□□□ -1.64
TRS85YDR108W YNL050CP53952 270 aa4.82□□□□□ -1.64
TRS85YDR108W MRS2Q01926 470 aa4.82□□□□□ -1.64
TRS85YDR108W NDL1Q06568 189 aa4.82□□□□□ -1.64
TRS85YDR108W GIN4Q12263 1142 aa4.82□□□□□ -1.64
TRS85YDR108W DSF2P38213 736 aa4.81□□□□□ -1.64
TRS85YDR108W AIM20P40451 204 aa4.81□□□□□ -1.64
TRS85YDR108W PDS5Q04264 1277 aa4.81□□□□□ -1.64
TRS85YDR108W SML1Q04964 104 aa4.81□□□□□ -1.64
TRS85YDR108W NFI1Q12216 726 aa4.81□□□□□ -1.64
TRS85YDR108W TY1B-DR4Q07793 1604 aa4.81□□□□□ -1.64
TRS85YDR108W PSO2P30620 661 aa4.81□□□□□ -1.64
TRS85YDR108W RTT107P38850 1070 aa4.81□□□□□ -1.64
TRS85YDR108W ORM2Q06144 216 aa4.81□□□□□ -1.64
TRS85YDR108W YOR389WQ08912 624 aa4.81□□□□□ -1.64
TRS85YDR108W GEA1P47102 1408 aaPredicted RBP4.8□□□□□ -1.64
TRS85YDR108W PHO87P25360 923 aa4.8□□□□□ -1.64
TRS85YDR108W MVP1P40959 511 aaKnown RBP4.8□□□□□ -1.64
TRS85YDR108W SLP1Q12232 587 aa4.8□□□□□ -1.64
TRS85YDR108W RPP0P05317 312 aaKnown RBP4.79□□□□□ -1.64
TRS85YDR108W ERG12P07277 443 aa4.79□□□□□ -1.64
TRS85YDR108W GDT1P38301 280 aaPredicted RBP4.79□□□□□ -1.64
TRS85YDR108W NDC80P40460 691 aa4.79□□□□□ -1.64
TRS85YDR108W MPP10P47083 593 aaKnown RBP4.79□□□□□ -1.64
TRS85YDR108W TY4B-PA0A0B7P3V8 1104 aa4.79□□□□□ -1.64
TRS85YDR108W COX6P00427 148 aa4.79□□□□□ -1.64
TRS85YDR108W RKM3P38222 552 aa4.79□□□□□ -1.64
TRS85YDR108W GGA1Q06336 557 aa4.79□□□□□ -1.64
TRS85YDR108W PEX19Q07418 342 aa4.79□□□□□ -1.64
TRS85YDR108W LAM6Q08001 693 aa4.79□□□□□ -1.64
TRS85YDR108W HSC82P15108 705 aaKnown RBP4.78□□□□□ -1.64
TRS85YDR108W STU2P46675 888 aa4.78□□□□□ -1.64
TRS85YDR108W ARP5P53946 755 aa4.78□□□□□ -1.64
TRS85YDR108W BPT1P14772 1559 aa4.78□□□□□ -1.65
TRS85YDR108W MIC60P36112 540 aa4.77□□□□□ -1.65
TRS85YDR108W SIT1P39980 628 aa4.77□□□□□ -1.65
TRS85YDR108W RIO2P40160 425 aaKnown RBP4.77□□□□□ -1.65
TRS85YDR108W CEP3P40969 608 aa4.77□□□□□ -1.65
TRS85YDR108W IAH1P41734 238 aa4.77□□□□□ -1.65
TRS85YDR108W VPS70P47161 811 aa4.77□□□□□ -1.65
TRS85YDR108W DPH5P32469 300 aaPredicted RBP4.77□□□□□ -1.65
TRS85YDR108W GCD11P32481 527 aaKnown RBP4.77□□□□□ -1.65
TRS85YDR108W NPL4P33755 580 aa4.77□□□□□ -1.65
TRS85YDR108W OLA1P38219 394 aaKnown RBP4.77□□□□□ -1.65
TRS85YDR108W VPS41P38959 992 aa4.77□□□□□ -1.65
TRS85YDR108W HOS4P40480 1083 aa4.77□□□□□ -1.65
TRS85YDR108W APL6P46682 809 aa4.77□□□□□ -1.65
TRS85YDR108W DNM1P54861 757 aa4.77□□□□□ -1.65
TRS85YDR108W ARR1Q06596 294 aa4.77□□□□□ -1.65
TRS85YDR108W GLE1Q12315 538 aa4.77□□□□□ -1.65
TRS85YDR108W NUP157P40064 1391 aaKnown RBP4.76□□□□□ -1.65
TRS85YDR108W RGR1P19263 1082 aa4.76□□□□□ -1.65
TRS85YDR108W NAB3P38996 802 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
TRS85YDR108W TSC11P40061 1430 aa4.76□□□□□ -1.65
TRS85YDR108W MSH1P25846 959 aa4.76□□□□□ -1.65
TRS85YDR108W NUF2P33895 451 aa4.76□□□□□ -1.65
TRS85YDR108W ISW1P38144 1129 aa4.76□□□□□ -1.65
TRS85YDR108W IMH1Q06704 911 aaKnown RBP4.76□□□□□ -1.65
TRS85YDR108W HSL1P34244 1518 aa4.75□□□□□ -1.65
TRS85YDR108W SWR1Q05471 1514 aa4.75□□□□□ -1.65
TRS85YDR108W CYC8P14922 966 aa4.75□□□□□ -1.65
TRS85YDR108W CLN1P20437 546 aa4.75□□□□□ -1.65
TRS85YDR108W SEC14P24280 304 aaKnown RBP4.75□□□□□ -1.65
TRS85YDR108W TOM71P38825 639 aaKnown RBP4.75□□□□□ -1.65
TRS85YDR108W BRE2P43132 505 aa4.75□□□□□ -1.65
TRS85YDR108W YPL062WQ02781 134 aa4.75□□□□□ -1.65
TRS85YDR108W CFT2Q12102 859 aaPredicted RBP4.75□□□□□ -1.65
TRS85YDR108W MAK21Q12176 1025 aaKnown RBP4.75□□□□□ -1.65
TRS85YDR108W VPS5Q92331 675 aa4.75□□□□□ -1.65
TRS85YDR108W NUP145P49687 1317 aa4.75□□□□□ -1.65
TRS85YDR108W GCN2P15442 1659 aa4.75□□□□□ -1.65
TRS85YDR108W GCD6P32501 712 aaKnown RBP4.74□□□□□ -1.65
TRS85YDR108W PIM1P36775 1133 aa4.74□□□□□ -1.65
TRS85YDR108W TPS3P38426 1054 aaKnown RBP4.74□□□□□ -1.65
TRS85YDR108W SAP1P39955 897 aaKnown RBP4.74□□□□□ -1.65
TRS85YDR108W SLX8P40072 274 aa4.74□□□□□ -1.65
TRS85YDR108W RRN7P40992 514 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms