RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W ROX1P25042 368 aa14.71□□□□□ -0.05
PTP1YDL230W SLA1P32790 1244 aa14.71□□□□□ -0.05
PTP1YDL230W PKH1Q03407 766 aa14.71□□□□□ -0.05
PTP1YDL230W NCB2Q92317 146 aa14.71□□□□□ -0.05
PTP1YDL230W NOT3P06102 836 aaKnown RBP14.7□□□□□ -0.06
PTP1YDL230W GRX1P25373 110 aaKnown RBP14.7□□□□□ -0.06
PTP1YDL230W ECM21P38167 1117 aaKnown RBP14.7□□□□□ -0.06
PTP1YDL230W SET1P38827 1080 aaKnown RBP14.7□□□□□ -0.06
PTP1YDL230W ITC1P53125 1264 aa14.7□□□□□ -0.06
PTP1YDL230W YLR271WQ06152 274 aa14.7□□□□□ -0.06
PTP1YDL230W PDR18P53756 1333 aa14.69□□□□□ -0.06
PTP1YDL230W KTR3P38130 404 aaPredicted RBP14.68□□□□□ -0.06
PTP1YDL230W PSH1Q12161 406 aa14.68□□□□□ -0.06
PTP1YDL230W LSP1Q12230 341 aaKnown RBP14.68□□□□□ -0.06
PTP1YDL230W PHM7Q12252 991 aa14.68□□□□□ -0.06
PTP1YDL230W SSF1P38789 453 aaPredicted RBP14.67□□□□□ -0.06
PTP1YDL230W YGL082WP53155 381 aa14.67□□□□□ -0.06
PTP1YDL230W MSP1P28737 362 aa14.65□□□□□ -0.06
PTP1YDL230W TEA1P47988 759 aa14.65□□□□□ -0.06
PTP1YDL230W YGL242CP53066 181 aa14.65□□□□□ -0.06
PTP1YDL230W MRPS35P53292 345 aa14.65□□□□□ -0.06
PTP1YDL230W ALO1P54783 526 aaKnown RBP14.65□□□□□ -0.06
PTP1YDL230W UTP10P42945 1769 aaKnown RBP14.65□□□□□ -0.06
PTP1YDL230W RIM20Q12033 661 aa14.64□□□□□ -0.07
PTP1YDL230W TRL1P09880 827 aaKnown RBP14.63□□□□□ -0.07
PTP1YDL230W SER1P33330 395 aaKnown RBP14.63□□□□□ -0.07
PTP1YDL230W MLC1P53141 149 aa14.63□□□□□ -0.07
PTP1YDL230W MDG1P53885 366 aa14.63□□□□□ -0.07
PTP1YDL230W FPR4Q06205 392 aaPredicted RBP14.63□□□□□ -0.07
PTP1YDL230W YIL055CP40523 627 aaKnown RBP14.62□□□□□ -0.07
PTP1YDL230W NPA3P47122 385 aa14.62□□□□□ -0.07
PTP1YDL230W LAM6Q08001 693 aa14.62□□□□□ -0.07
PTP1YDL230W AAP1P37898 856 aaKnown RBP14.61□□□□□ -0.07
PTP1YDL230W BRE1Q07457 700 aaKnown RBP14.61□□□□□ -0.07
PTP1YDL230W RPN11P43588 306 aaKnown RBP14.6□□□□□ -0.07
PTP1YDL230W VPS20Q04272 221 aa14.6□□□□□ -0.07
PTP1YDL230W SSK22P25390 1331 aaPredicted RBP14.6□□□□□ -0.07
PTP1YDL230W RNR2P09938 399 aaKnown RBP14.59□□□□□ -0.07
PTP1YDL230W SLN1P39928 1220 aaPredicted RBP14.59□□□□□ -0.07
PTP1YDL230W PIB2P53191 635 aa14.59□□□□□ -0.07
PTP1YDL230W AI2P03876 854 aa14.58□□□□□ -0.08
PTP1YDL230W KRI1P42846 591 aaKnown RBP14.57□□□□□ -0.08
PTP1YDL230W YGL081WP53156 320 aa14.57□□□□□ -0.08
PTP1YDL230W UBP16Q02863 499 aa14.57□□□□□ -0.08
PTP1YDL230W MTC5Q03897 1148 aa14.57□□□□□ -0.08
PTP1YDL230W GRE2Q12068 342 aaKnown RBP14.57□□□□□ -0.08
PTP1YDL230W NYV1Q12255 253 aa14.57□□□□□ -0.08
PTP1YDL230W GYP5Q12344 894 aa14.57□□□□□ -0.08
PTP1YDL230W MSB4Q12317 492 aa14.56□□□□□ -0.08
PTP1YDL230W PRP40P33203 583 aaKnown RBP14.55□□□□□ -0.08
PTP1YDL230W ARL1P38116 183 aaKnown RBP14.55□□□□□ -0.08
PTP1YDL230W YPR148CQ06523 435 aa14.55□□□□□ -0.08
PTP1YDL230W SNU66Q12420 587 aaPredicted RBP14.55□□□□□ -0.08
PTP1YDL230W SEC18P18759 758 aaKnown RBP14.54□□□□□ -0.08
PTP1YDL230W KTR1P27810 393 aaKnown RBP14.54□□□□□ -0.08
PTP1YDL230W SUP35P05453 685 aaKnown RBP14.53□□□□□ -0.08
PTP1YDL230W YJL181WP46987 611 aa14.53□□□□□ -0.08
PTP1YDL230W RPN7Q06103 429 aaKnown RBP14.53□□□□□ -0.08
PTP1YDL230W NPR2P39923 615 aa14.52□□□□□ -0.09
PTP1YDL230W AIM9P40053 627 aaKnown RBP14.52□□□□□ -0.09
PTP1YDL230W EPS1P40557 701 aa14.52□□□□□ -0.09
PTP1YDL230W STM1P39015 273 aaKnown RBP14.51□□□□□ -0.09
PTP1YDL230W YNL193WP53870 558 aa14.51□□□□□ -0.09
PTP1YDL230W PBY1P38254 753 aa14.49□□□□□ -0.09
PTP1YDL230W BDH2P39713 417 aa14.49□□□□□ -0.09
PTP1YDL230W HAP5Q02516 242 aa14.49□□□□□ -0.09
PTP1YDL230W HRQ1Q05549 1077 aa14.49□□□□□ -0.09
PTP1YDL230W BIK1P11709 440 aa14.48□□□□□ -0.09
PTP1YDL230W KNS1P32350 737 aaPredicted RBP14.48□□□□□ -0.09
PTP1YDL230W CWH41P53008 833 aa14.48□□□□□ -0.09
PTP1YDL230W SAC3P46674 1301 aa14.47□□□□□ -0.09
PTP1YDL230W PGA3Q12746 312 aaKnown RBP14.47□□□□□ -0.09
PTP1YDL230W HAT1Q12341 374 aa14.46□□□□□ -0.09
PTP1YDL230W COG8Q04632 607 aa14.45□□□□□ -0.1
PTP1YDL230W TSR3Q12094 313 aaKnown RBP14.45□□□□□ -0.1
PTP1YDL230W CIR1P42940 261 aa14.44□□□□□ -0.1
PTP1YDL230W CTI6Q08923 506 aa14.44□□□□□ -0.1
PTP1YDL230W ADR1P07248 1323 aa14.43□□□□□ -0.1
PTP1YDL230W HST1P53685 503 aa14.43□□□□□ -0.1
PTP1YDL230W RPL19AP0CX82 189 aaKnown RBP14.42□□□□□ -0.1
PTP1YDL230W RPL19BP0CX83 189 aaPredicted RBP14.42□□□□□ -0.1
PTP1YDL230W CIC1P38779 376 aaKnown RBP14.42□□□□□ -0.1
PTP1YDL230W RRI2Q12348 645 aa14.42□□□□□ -0.1
PTP1YDL230W YMR147WP40218 223 aaKnown RBP14.41□□□□□ -0.1
PTP1YDL230W YMR074CQ04773 145 aa14.41□□□□□ -0.1
PTP1YDL230W NGR1P32831 672 aaKnown RBP14.4□□□□□ -0.1
PTP1YDL230W LYS4P49367 693 aaPredicted RBP14.4□□□□□ -0.1
PTP1YDL230W CTF18P49956 741 aa14.4□□□□□ -0.1
PTP1YDL230W HAL5P38970 855 aaKnown RBP14.39□□□□□ -0.11
PTP1YDL230W VID28P40547 921 aa14.39□□□□□ -0.11
PTP1YDL230W ENT3P47160 408 aa14.39□□□□□ -0.11
PTP1YDL230W BUG1Q12191 341 aa14.39□□□□□ -0.11
PTP1YDL230W OSH3P38713 996 aaKnown RBP14.38□□□□□ -0.11
PTP1YDL230W SPO22P40511 975 aa14.38□□□□□ -0.11
PTP1YDL230W POM152P39685 1337 aa14.38□□□□□ -0.11
PTP1YDL230W RVS167P39743 482 aaKnown RBP14.37□□□□□ -0.11
PTP1YDL230W LAM4P38800 1345 aa14.37□□□□□ -0.11
PTP1YDL230W TPM1P17536 199 aaKnown RBP14.36□□□□□ -0.11
PTP1YDL230W OPI1P21957 404 aa14.36□□□□□ -0.11
PTP1YDL230W BBC1P47068 1157 aa14.36□□□□□ -0.11
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms