RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeastyeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC31YDL195W MOT1P32333 1867 aa2.55□□□□□ -2
SEC31YDL195W CCC2P38995 1004 aa2.55□□□□□ -2
SEC31YDL195W CHZ1P40019 153 aaPredicted RBP2.55□□□□□ -2
SEC31YDL195W NUG1P40010 520 aaKnown RBP2.55□□□□□ -2
SEC31YDL195W CIR1P42940 261 aa2.55□□□□□ -2
SEC31YDL195W HRQ1Q05549 1077 aa2.55□□□□□ -2
SEC31YDL195W RPC31P17890 251 aa2.55□□□□□ -2
SEC31YDL195W MSP1P28737 362 aa2.55□□□□□ -2
SEC31YDL195W YBL036CP38197 257 aa2.55□□□□□ -2
SEC31YDL195W BDH2P39713 417 aa2.55□□□□□ -2
SEC31YDL195W CLC1P17891 233 aa2.54□□□□□ -2
SEC31YDL195W SSA4P22202 642 aaKnown RBP2.54□□□□□ -2
SEC31YDL195W BUD31P25337 157 aaPredicted RBP2.54□□□□□ -2
SEC31YDL195W RTG2P32608 588 aaKnown RBP2.54□□□□□ -2
SEC31YDL195W ELM1P32801 640 aa2.54□□□□□ -2
SEC31YDL195W AIM9P40053 627 aaKnown RBP2.54□□□□□ -2
SEC31YDL195W CTF4Q01454 927 aa2.54□□□□□ -2
SEC31YDL195W RPA135P22138 1203 aaKnown RBP2.53□□□□□ -2
SEC31YDL195W KTR3P38130 404 aaPredicted RBP2.53□□□□□ -2
SEC31YDL195W YPP1P46951 817 aa2.53□□□□□ -2
SEC31YDL195W TEA1P47988 759 aa2.53□□□□□ -2
SEC31YDL195W SAC3P46674 1301 aa2.53□□□□□ -2
SEC31YDL195W LEU2P04173 364 aaPredicted RBP2.53□□□□□ -2
SEC31YDL195W RNH70P53331 553 aa2.53□□□□□ -2
SEC31YDL195W SRT1Q03175 343 aa2.53□□□□□ -2
SEC31YDL195W OYE2Q03558 400 aaKnown RBP2.53□□□□□ -2
SEC31YDL195W AI2P03876 854 aa2.53□□□□□ -2
SEC31YDL195W PEP7P32609 515 aa2.53□□□□□ -2
SEC31YDL195W SWI1P09547 1314 aa2.52□□□□□ -2.01
SEC31YDL195W YBL086CP38177 466 aa2.52□□□□□ -2.01
SEC31YDL195W GTT3P39996 337 aa2.52□□□□□ -2.01
SEC31YDL195W MDG1P53885 366 aa2.52□□□□□ -2.01
SEC31YDL195W RCM1P53972 490 aa2.52□□□□□ -2.01
SEC31YDL195W ALD3P54114 506 aa2.52□□□□□ -2.01
SEC31YDL195W GCR2Q01722 534 aa2.52□□□□□ -2.01
SEC31YDL195W ECM16Q04217 1267 aaKnown RBP2.52□□□□□ -2.01
SEC31YDL195W PRP45P28004 379 aaPredicted RBP2.52□□□□□ -2.01
SEC31YDL195W SRP40P32583 406 aaPredicted RBP2.52□□□□□ -2.01
SEC31YDL195W RIF1P29539 1916 aa2.52□□□□□ -2.01
SEC31YDL195W CDC3P32457 520 aaKnown RBP2.52□□□□□ -2.01
SEC31YDL195W YKL091CP33324 310 aaKnown RBP2.52□□□□□ -2.01
SEC31YDL195W GRS1P38088 690 aaKnown RBP2.52□□□□□ -2.01
SEC31YDL195W VAC8P39968 578 aa2.52□□□□□ -2.01
SEC31YDL195W MAM1P40065 302 aa2.52□□□□□ -2.01
SEC31YDL195W TCB2P48231 1178 aa2.52□□□□□ -2.01
SEC31YDL195W VHR2P40041 505 aa2.51□□□□□ -2.01
SEC31YDL195W CSN12P47130 423 aa2.51□□□□□ -2.01
SEC31YDL195W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SEC31YDL195W FOX2Q02207 900 aaKnown RBP2.51□□□□□ -2.01
SEC31YDL195W LAA1P39526 2014 aa2.51□□□□□ -2.01
SEC31YDL195W TIF1P10081 395 aaKnown RBP2.51□□□□□ -2.01
SEC31YDL195W SPT21P35209 758 aa2.51□□□□□ -2.01
SEC31YDL195W SSA2P10592 639 aaKnown RBP2.51□□□□□ -2.01
SEC31YDL195W PDI1P17967 522 aaKnown RBP2.51□□□□□ -2.01
SEC31YDL195W SPC42P36094 363 aa2.51□□□□□ -2.01
SEC31YDL195W BOI2P39969 1040 aa2.51□□□□□ -2.01
SEC31YDL195W INP54Q08227 384 aaKnown RBP2.51□□□□□ -2.01
SEC31YDL195W RFT1P38206 574 aaPredicted RBP2.5□□□□□ -2.01
SEC31YDL195W EPS1P40557 701 aa2.5□□□□□ -2.01
SEC31YDL195W HPC2Q01448 625 aa2.5□□□□□ -2.01
SEC31YDL195W YPL150WQ12152 901 aa2.5□□□□□ -2.01
SEC31YDL195W COQ4O13525 335 aa2.5□□□□□ -2.01
SEC31YDL195W TRP5P00931 707 aaKnown RBP2.5□□□□□ -2.01
SEC31YDL195W SCJ1P25303 377 aa2.5□□□□□ -2.01
SEC31YDL195W TPD3P31383 635 aa2.5□□□□□ -2.01
SEC31YDL195W AKL1P38080 1108 aaKnown RBP2.5□□□□□ -2.01
SEC31YDL195W YOL057WQ08225 711 aa2.5□□□□□ -2.01
SEC31YDL195W CST6P40535 587 aa2.5□□□□□ -2.01
SEC31YDL195W CWC24P53769 259 aa2.5□□□□□ -2.01
SEC31YDL195W YLR407WQ06070 228 aa2.5□□□□□ -2.01
SEC31YDL195W YNR021WP53723 404 aaKnown RBP2.49□□□□□ -2.01
SEC31YDL195W RKM3P38222 552 aa2.49□□□□□ -2.01
SEC31YDL195W RPN11P43588 306 aaKnown RBP2.49□□□□□ -2.01
SEC31YDL195W PKH3Q03306 898 aaPredicted RBP2.49□□□□□ -2.01
SEC31YDL195W NOP8Q08287 484 aaPredicted RBP2.49□□□□□ -2.01
SEC31YDL195W RTR1P40084 226 aaPredicted RBP2.49□□□□□ -2.01
SEC31YDL195W NPA3P47122 385 aa2.49□□□□□ -2.01
SEC31YDL195W GYP7P48365 746 aa2.49□□□□□ -2.01
SEC31YDL195W YBL113CQ7M4S9 792 aa2.49□□□□□ -2.01
SEC31YDL195W AAP1P37898 856 aaKnown RBP2.48□□□□□ -2.01
SEC31YDL195W CSI1Q04368 295 aa2.48□□□□□ -2.01
SEC31YDL195W NOB1Q08444 459 aaKnown RBP2.48□□□□□ -2.01
SEC31YDL195W ADR1P07248 1323 aa2.48□□□□□ -2.01
SEC31YDL195W ARG8P18544 423 aa2.48□□□□□ -2.01
SEC31YDL195W PEX21P50091 288 aa2.48□□□□□ -2.01
SEC31YDL195W SUB1P54000 292 aaKnown RBP2.48□□□□□ -2.01
SEC31YDL195W VPS72Q03388 795 aa2.48□□□□□ -2.01
SEC31YDL195W SLM3Q12093 417 aa2.48□□□□□ -2.01
SEC31YDL195W BIO2P32451 375 aa2.48□□□□□ -2.01
SEC31YDL195W RAD24P32641 659 aa2.48□□□□□ -2.01
SEC31YDL195W FUN12P39730 1002 aaKnown RBP2.48□□□□□ -2.01
SEC31YDL195W STE11P23561 717 aa2.47□□□□□ -2.01
SEC31YDL195W DLD1P32891 587 aa2.47□□□□□ -2.01
SEC31YDL195W EBP2P36049 427 aaKnown RBP2.47□□□□□ -2.01
SEC31YDL195W ALD6P54115 500 aaKnown RBP2.47□□□□□ -2.01
SEC31YDL195W NKP2Q06162 153 aa2.47□□□□□ -2.01
SEC31YDL195W LAM4P38800 1345 aa2.47□□□□□ -2.01
SEC31YDL195W UBX7P38349 436 aa2.47□□□□□ -2.01
SEC31YDL195W HST1P53685 503 aa2.47□□□□□ -2.01
SEC31YDL195W SQS1P53866 767 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms