RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C LYS2P07702 1392 aa6.92□□□□□ -1.3
PAT1YCR077C RAD51P25454 400 aa6.91□□□□□ -1.3
PAT1YCR077C RFC1P38630 861 aaKnown RBP6.91□□□□□ -1.3
PAT1YCR077C TCD1P38756 429 aa6.91□□□□□ -1.3
PAT1YCR077C YNG2P38806 282 aaKnown RBP6.91□□□□□ -1.3
PAT1YCR077C RSM25P40496 264 aa6.91□□□□□ -1.3
PAT1YCR077C GYP7P48365 746 aa6.91□□□□□ -1.3
PAT1YCR077C YLL054CQ12244 843 aa6.91□□□□□ -1.3
PAT1YCR077C CIN4P39110 191 aa6.91□□□□□ -1.3
PAT1YCR077C DSD1P53095 428 aa6.91□□□□□ -1.3
PAT1YCR077C HXT17P53631 564 aa6.91□□□□□ -1.3
PAT1YCR077C TRL1P09880 827 aaKnown RBP6.9□□□□□ -1.3
PAT1YCR077C RNR2P09938 399 aaKnown RBP6.9□□□□□ -1.3
PAT1YCR077C RIM101P33400 625 aa6.9□□□□□ -1.3
PAT1YCR077C CSI1Q04368 295 aa6.9□□□□□ -1.3
PAT1YCR077C CDC16P09798 840 aa6.9□□□□□ -1.31
PAT1YCR077C BIK1P11709 440 aa6.9□□□□□ -1.31
PAT1YCR077C RTF1P53064 558 aa6.9□□□□□ -1.31
PAT1YCR077C SRT1Q03175 343 aa6.9□□□□□ -1.31
PAT1YCR077C LEU2P04173 364 aaPredicted RBP6.89□□□□□ -1.31
PAT1YCR077C CYC8P14922 966 aa6.89□□□□□ -1.31
PAT1YCR077C DSF2P38213 736 aa6.89□□□□□ -1.31
PAT1YCR077C CWH41P53008 833 aa6.89□□□□□ -1.31
PAT1YCR077C SPO1P53541 631 aa6.89□□□□□ -1.31
PAT1YCR077C APC11Q12157 165 aa6.89□□□□□ -1.31
PAT1YCR077C RPS19AP07280 144 aaKnown RBP6.89□□□□□ -1.31
PAT1YCR077C RPS19BP07281 144 aaPredicted RBP6.89□□□□□ -1.31
PAT1YCR077C ISW1P38144 1129 aa6.89□□□□□ -1.31
PAT1YCR077C PBY1P38254 753 aa6.89□□□□□ -1.31
PAT1YCR077C YGL081WP53156 320 aa6.89□□□□□ -1.31
PAT1YCR077C YNL050CP53952 270 aa6.89□□□□□ -1.31
PAT1YCR077C RPC82P32349 654 aa6.88□□□□□ -1.31
PAT1YCR077C CEP3P40969 608 aa6.88□□□□□ -1.31
PAT1YCR077C BDP1P46678 594 aa6.88□□□□□ -1.31
PAT1YCR077C SRP54P20424 541 aaKnown RBP6.88□□□□□ -1.31
PAT1YCR077C AIM20P40451 204 aa6.88□□□□□ -1.31
PAT1YCR077C GAS4Q08271 471 aa6.88□□□□□ -1.31
PAT1YCR077C CLB1P24868 471 aa6.87□□□□□ -1.31
PAT1YCR077C ALD3P54114 506 aa6.87□□□□□ -1.31
PAT1YCR077C RRP15Q06511 250 aaPredicted RBP6.87□□□□□ -1.31
PAT1YCR077C CPS1P27614 576 aa6.87□□□□□ -1.31
PAT1YCR077C AKL1P38080 1108 aaKnown RBP6.87□□□□□ -1.31
PAT1YCR077C MAM1P40065 302 aa6.87□□□□□ -1.31
PAT1YCR077C THI12P42883 340 aa6.87□□□□□ -1.31
PAT1YCR077C THI5P43534 340 aa6.87□□□□□ -1.31
PAT1YCR077C MTR4P47047 1073 aaKnown RBP6.87□□□□□ -1.31
PAT1YCR077C THI11P47183 340 aa6.87□□□□□ -1.31
PAT1YCR077C ERV41Q04651 352 aa6.87□□□□□ -1.31
PAT1YCR077C THI13Q07748 340 aa6.87□□□□□ -1.31
PAT1YCR077C PET111P08468 800 aa6.86□□□□□ -1.31
PAT1YCR077C RPS24AP0CX31 135 aaKnown RBP6.86□□□□□ -1.31
PAT1YCR077C RPS24BP0CX32 135 aaKnown RBP6.86□□□□□ -1.31
PAT1YCR077C PUP2P32379 260 aa6.86□□□□□ -1.31
PAT1YCR077C ELM1P32801 640 aa6.86□□□□□ -1.31
PAT1YCR077C DID4P36108 232 aa6.86□□□□□ -1.31
PAT1YCR077C MRPL10P36520 322 aa6.86□□□□□ -1.31
PAT1YCR077C DMA2P53924 522 aa6.86□□□□□ -1.31
PAT1YCR077C VPS60Q03390 229 aa6.86□□□□□ -1.31
PAT1YCR077C TAF13P11747 167 aa6.86□□□□□ -1.31
PAT1YCR077C ZDS1P50111 915 aaKnown RBP6.86□□□□□ -1.31
PAT1YCR077C PEX19Q07418 342 aa6.86□□□□□ -1.31
PAT1YCR077C NOP14Q99207 810 aaKnown RBP6.86□□□□□ -1.31
PAT1YCR077C GCD7P32502 381 aaPredicted RBP6.85□□□□□ -1.31
PAT1YCR077C MGA2P40578 1113 aa6.85□□□□□ -1.31
PAT1YCR077C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
PAT1YCR077C TPO2P53283 614 aa6.85□□□□□ -1.31
PAT1YCR077C TIM50Q02776 476 aa6.85□□□□□ -1.31
PAT1YCR077C SFI1Q12369 946 aa6.85□□□□□ -1.31
PAT1YCR077C CDC11P32458 415 aa6.84□□□□□ -1.31
PAT1YCR077C SSL2Q00578 843 aa6.84□□□□□ -1.31
PAT1YCR077C PHO87P25360 923 aa6.84□□□□□ -1.31
PAT1YCR077C SPB4P25808 606 aaPredicted RBP6.84□□□□□ -1.31
PAT1YCR077C VID30P53076 958 aa6.84□□□□□ -1.31
PAT1YCR077C YNR029CP53729 429 aaKnown RBP6.84□□□□□ -1.31
PAT1YCR077C NFI1Q12216 726 aa6.84□□□□□ -1.31
PAT1YCR077C MBR1P23493 339 aa6.83□□□□□ -1.32
PAT1YCR077C NTH2P35172 780 aa6.83□□□□□ -1.32
PAT1YCR077C ATG36P46983 293 aa6.83□□□□□ -1.32
PAT1YCR077C PRP43P53131 767 aaKnown RBP6.83□□□□□ -1.32
PAT1YCR077C YIL177CP40434 1758 aa6.83□□□□□ -1.32
PAT1YCR077C YJL225CP40889 1758 aa6.83□□□□□ -1.32
PAT1YCR077C NPR3P38742 1146 aa6.83□□□□□ -1.32
PAT1YCR077C UBP10P53874 792 aaPredicted RBP6.83□□□□□ -1.32
PAT1YCR077C YRF1-2P40105 1681 aa6.82□□□□□ -1.32
PAT1YCR077C VAS1P07806 1104 aaKnown RBP6.82□□□□□ -1.32
PAT1YCR077C CCT5P40413 562 aaKnown RBP6.82□□□□□ -1.32
PAT1YCR077C YVC1Q12324 675 aa6.82□□□□□ -1.32
PAT1YCR077C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
PAT1YCR077C TY4B-HP0C2J7 1802 aa6.82□□□□□ -1.32
PAT1YCR077C TY4B-JP47024 1803 aa6.82□□□□□ -1.32
PAT1YCR077C DPS1P04802 557 aaKnown RBP6.82□□□□□ -1.32
PAT1YCR077C PIM1P36775 1133 aa6.82□□□□□ -1.32
PAT1YCR077C SWI3P32591 825 aa6.81□□□□□ -1.32
PAT1YCR077C RRP5Q05022 1729 aaKnown RBP6.81□□□□□ -1.32
PAT1YCR077C FRS2P15625 503 aaKnown RBP6.81□□□□□ -1.32
PAT1YCR077C ATE1P16639 503 aa6.81□□□□□ -1.32
PAT1YCR077C PSE1P32337 1089 aaKnown RBP6.81□□□□□ -1.32
PAT1YCR077C RAD24P32641 659 aa6.81□□□□□ -1.32
PAT1YCR077C MNR2P35724 969 aa6.81□□□□□ -1.32
PAT1YCR077C UTP13Q05946 817 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms