RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C RUD3Q12234 484 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C COQ8P27697 501 aa3.3□□□□□ -1.88
RIF1YBR275C MAK5P38112 773 aaPredicted RBP3.3□□□□□ -1.88
RIF1YBR275C UBX2Q04228 584 aa3.3□□□□□ -1.88
RIF1YBR275C PPM2Q08282 695 aa3.3□□□□□ -1.88
RIF1YBR275C VCX1Q99385 411 aa3.3□□□□□ -1.88
RIF1YBR275C RPS9AO13516 197 aaKnown RBP3.3□□□□□ -1.88
RIF1YBR275C PMI40P29952 429 aaKnown RBP3.3□□□□□ -1.88
RIF1YBR275C PEX5P35056 612 aa3.3□□□□□ -1.88
RIF1YBR275C GID8P40208 455 aa3.3□□□□□ -1.88
RIF1YBR275C URB2P47108 1174 aa3.3□□□□□ -1.88
RIF1YBR275C RRP6Q12149 733 aaKnown RBP3.3□□□□□ -1.88
RIF1YBR275C ILS1P09436 1072 aaKnown RBP3.3□□□□□ -1.88
RIF1YBR275C BUD27P43573 796 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RIF1YBR275C SGM1P47166 707 aa3.3□□□□□ -1.88
RIF1YBR275C CSM3Q04659 317 aa3.3□□□□□ -1.88
RIF1YBR275C SAC6P32599 642 aaKnown RBP3.3□□□□□ -1.88
RIF1YBR275C ESL2P36168 1195 aa3.29□□□□□ -1.88
RIF1YBR275C SPO20Q04359 397 aa3.29□□□□□ -1.88
RIF1YBR275C MET7Q08645 548 aa3.29□□□□□ -1.88
RIF1YBR275C CSM2P40465 213 aa3.29□□□□□ -1.88
RIF1YBR275C YNR021WP53723 404 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C TMA17Q12513 150 aa3.29□□□□□ -1.88
RIF1YBR275C ARL1P38116 183 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C MGA2P40578 1113 aa3.29□□□□□ -1.88
RIF1YBR275C NOB1Q08444 459 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C GLY1P37303 387 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C GUA1P38625 525 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C PIP2P52960 996 aa3.29□□□□□ -1.88
RIF1YBR275C TPO2P53283 614 aa3.29□□□□□ -1.88
RIF1YBR275C NSE5Q03718 556 aa3.29□□□□□ -1.88
RIF1YBR275C RPB2P08518 1224 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C MDL2P33311 773 aa3.29□□□□□ -1.88
RIF1YBR275C GRS1P38088 690 aaKnown RBP3.29□□□□□ -1.88
RIF1YBR275C VTC2P43585 828 aa3.29□□□□□ -1.88
RIF1YBR275C SGS1P35187 1447 aa3.28□□□□□ -1.88
RIF1YBR275C FRS2P15625 503 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C SWC3P31376 625 aa3.28□□□□□ -1.88
RIF1YBR275C NAN1Q02931 896 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C PSF3Q12146 194 aa3.28□□□□□ -1.88
RIF1YBR275C MCM2P29469 868 aa3.28□□□□□ -1.88
RIF1YBR275C TOM71P38825 639 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C AIM9P40053 627 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C YFL040WP43562 540 aa3.28□□□□□ -1.88
RIF1YBR275C LSB1P53281 241 aa3.28□□□□□ -1.88
RIF1YBR275C ATP25Q03153 612 aa3.28□□□□□ -1.88
RIF1YBR275C YOR131CQ12486 218 aa3.28□□□□□ -1.88
RIF1YBR275C MLS1P30952 554 aa3.28□□□□□ -1.88
RIF1YBR275C GUT1P32190 709 aa3.28□□□□□ -1.88
RIF1YBR275C ORC6P38826 435 aa3.28□□□□□ -1.88
RIF1YBR275C CTT1P06115 562 aa3.28□□□□□ -1.88
RIF1YBR275C AAD16Q02895 342 aa3.28□□□□□ -1.88
RIF1YBR275C RPN7Q06103 429 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C RVB2Q12464 471 aaKnown RBP3.28□□□□□ -1.88
RIF1YBR275C MMS1Q06211 1407 aa3.28□□□□□ -1.89
RIF1YBR275C CET1O13297 549 aaPredicted RBP3.27□□□□□ -1.89
RIF1YBR275C TUF1P02992 437 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C DCD1P06773 312 aa3.27□□□□□ -1.89
RIF1YBR275C YKL075CP36083 450 aa3.27□□□□□ -1.89
RIF1YBR275C CWH41P53008 833 aa3.27□□□□□ -1.89
RIF1YBR275C THS1P04801 734 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C SNF7P39929 240 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C SUB1P54000 292 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C HEH2Q03281 663 aa3.27□□□□□ -1.89
RIF1YBR275C UTP14Q04500 899 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C NTO1Q12311 748 aa3.27□□□□□ -1.89
RIF1YBR275C SSM4P40318 1319 aa3.27□□□□□ -1.89
RIF1YBR275C BI4P03879 638 aa3.27□□□□□ -1.89
RIF1YBR275C MCM3P24279 971 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C TFC1P32367 649 aa3.27□□□□□ -1.89
RIF1YBR275C TY4B-PA0A0B7P3V8 1104 aa3.27□□□□□ -1.89
RIF1YBR275C PSF2P40359 213 aa3.27□□□□□ -1.89
RIF1YBR275C FYV8P46949 817 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C RSM26P47141 266 aa3.27□□□□□ -1.89
RIF1YBR275C PIB2P53191 635 aa3.27□□□□□ -1.89
RIF1YBR275C OSW2Q12202 724 aa3.27□□□□□ -1.89
RIF1YBR275C TRM44Q02648 567 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C NOG1Q02892 647 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C GSF2Q04697 403 aaKnown RBP3.27□□□□□ -1.89
RIF1YBR275C STH1P32597 1359 aa3.27□□□□□ -1.89
RIF1YBR275C APL2P36000 726 aaPredicted RBP3.26□□□□□ -1.89
RIF1YBR275C MPP10P47083 593 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C ISM1P48526 1002 aa3.26□□□□□ -1.89
RIF1YBR275C EAF7P53911 425 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C CLU1Q03690 1277 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C CWC2Q12046 339 aaPredicted RBP3.26□□□□□ -1.89
RIF1YBR275C YAP3P38749 330 aa3.26□□□□□ -1.89
RIF1YBR275C OYE3P41816 400 aaPredicted RBP3.26□□□□□ -1.89
RIF1YBR275C GLE1Q12315 538 aa3.26□□□□□ -1.89
RIF1YBR275C NKP1Q12493 238 aa3.26□□□□□ -1.89
RIF1YBR275C MSS116P15424 664 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C YKL133CP36066 463 aa3.26□□□□□ -1.89
RIF1YBR275C YFR018CP43599 363 aa3.26□□□□□ -1.89
RIF1YBR275C NPA3P47122 385 aa3.26□□□□□ -1.89
RIF1YBR275C YGL140CP53120 1219 aa3.26□□□□□ -1.89
RIF1YBR275C TIM50Q02776 476 aa3.26□□□□□ -1.89
RIF1YBR275C CDC53Q12018 815 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C RUP1Q12242 671 aa3.26□□□□□ -1.89
RIF1YBR275C DPS1P04802 557 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C NIC96P34077 839 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms