RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W SSN3P39073 555 aa8.72□□□□□ -1.01
SLX1YBR228W SLX8P40072 274 aa8.72□□□□□ -1.01
SLX1YBR228W MSN5P52918 1224 aa8.72□□□□□ -1.01
SLX1YBR228W AIM9P40053 627 aaKnown RBP8.7□□□□□ -1.02
SLX1YBR228W SUM1P46676 1062 aa8.7□□□□□ -1.02
SLX1YBR228W MRX10Q05648 414 aa8.7□□□□□ -1.02
SLX1YBR228W DMA2P53924 522 aa8.69□□□□□ -1.02
SLX1YBR228W UBP15P50101 1230 aa8.68□□□□□ -1.02
SLX1YBR228W TY1A-DR3Q12441 440 aa8.68□□□□□ -1.02
SLX1YBR228W CUZ1P53899 274 aa8.66□□□□□ -1.02
SLX1YBR228W SWI5P08153 709 aa8.65□□□□□ -1.02
SLX1YBR228W SLA1P32790 1244 aa8.65□□□□□ -1.02
SLX1YBR228W KTR7P40504 517 aa8.65□□□□□ -1.02
SLX1YBR228W LYS5P50113 272 aa8.65□□□□□ -1.02
SLX1YBR228W DPH6Q12429 685 aa8.65□□□□□ -1.02
SLX1YBR228W PDI1P17967 522 aaKnown RBP8.64□□□□□ -1.03
SLX1YBR228W YFL034WP43564 1073 aa8.64□□□□□ -1.03
SLX1YBR228W JJJ2P46997 583 aa8.64□□□□□ -1.03
SLX1YBR228W CEM1P39525 442 aa8.63□□□□□ -1.03
SLX1YBR228W RPS6AP0CX37 236 aaKnown RBP8.62□□□□□ -1.03
SLX1YBR228W RPS6BP0CX38 236 aaPredicted RBP8.62□□□□□ -1.03
SLX1YBR228W YMR265CQ03508 461 aaKnown RBP8.62□□□□□ -1.03
SLX1YBR228W NTH2P35172 780 aa8.61□□□□□ -1.03
SLX1YBR228W IRE1P32361 1115 aa8.6□□□□□ -1.03
SLX1YBR228W JJJ3P47138 172 aa8.59□□□□□ -1.03
SLX1YBR228W DIT1P21623 536 aa8.58□□□□□ -1.04
SLX1YBR228W TSC13Q99190 310 aa8.58□□□□□ -1.04
SLX1YBR228W PEP12P32854 288 aa8.57□□□□□ -1.04
SLX1YBR228W SHM1P37292 490 aaPredicted RBP8.57□□□□□ -1.04
SLX1YBR228W KRE33P53914 1056 aaKnown RBP8.57□□□□□ -1.04
SLX1YBR228W YPQ2Q06328 317 aa8.56□□□□□ -1.04
SLX1YBR228W ADE12P80210 433 aaKnown RBP8.55□□□□□ -1.04
SLX1YBR228W CYT1P07143 309 aa8.53□□□□□ -1.04
SLX1YBR228W SIS2P36024 562 aa8.53□□□□□ -1.04
SLX1YBR228W PSH1Q12161 406 aa8.53□□□□□ -1.04
SLX1YBR228W PHO87P25360 923 aa8.52□□□□□ -1.05
SLX1YBR228W PDC6P26263 563 aaKnown RBP8.52□□□□□ -1.05
SLX1YBR228W ACS2P52910 683 aaKnown RBP8.52□□□□□ -1.05
SLX1YBR228W SYT1Q06836 1226 aa8.52□□□□□ -1.05
SLX1YBR228W MRPL16P38064 232 aa8.5□□□□□ -1.05
SLX1YBR228W STB3Q12427 513 aa8.5□□□□□ -1.05
SLX1YBR228W HAP4P14064 554 aa8.49□□□□□ -1.05
SLX1YBR228W YTA6P40328 754 aa8.49□□□□□ -1.05
SLX1YBR228W MCM1P11746 286 aa8.48□□□□□ -1.05
SLX1YBR228W FPS1P23900 669 aa8.48□□□□□ -1.05
SLX1YBR228W YNL165WP53891 406 aa8.48□□□□□ -1.05
SLX1YBR228W YDR461C-AQ2V2P7 80 aa8.48□□□□□ -1.05
SLX1YBR228W MLF3P32047 452 aa8.47□□□□□ -1.05
SLX1YBR228W MDJ1P35191 511 aa8.47□□□□□ -1.05
SLX1YBR228W NSG2P53898 299 aa8.47□□□□□ -1.05
SLX1YBR228W RPS31P05759 152 aaKnown RBP8.46□□□□□ -1.06
SLX1YBR228W GAL2P13181 574 aa8.46□□□□□ -1.06
SLX1YBR228W GAS4Q08271 471 aa8.46□□□□□ -1.06
SLX1YBR228W THI72Q08579 599 aa8.46□□□□□ -1.06
SLX1YBR228W Q0182Q9ZZW1 134 aa8.46□□□□□ -1.06
SLX1YBR228W AI1P03875 834 aa8.45□□□□□ -1.06
SLX1YBR228W TTI1P36097 1038 aa8.44□□□□□ -1.06
SLX1YBR228W TGL4P36165 910 aa8.44□□□□□ -1.06
SLX1YBR228W ICP55P40051 511 aa8.44□□□□□ -1.06
SLX1YBR228W ECM23Q02710 187 aa8.44□□□□□ -1.06
SLX1YBR228W MTC5Q03897 1148 aa8.44□□□□□ -1.06
SLX1YBR228W PUS1Q12211 544 aaKnown RBP8.44□□□□□ -1.06
SLX1YBR228W CPS1P27614 576 aa8.43□□□□□ -1.06
SLX1YBR228W ROM1P53046 1155 aa8.42□□□□□ -1.06
SLX1YBR228W PHM7Q12252 991 aa8.41□□□□□ -1.06
SLX1YBR228W LEU1P07264 779 aaKnown RBP8.4□□□□□ -1.06
SLX1YBR228W ALD2P47771 506 aa8.4□□□□□ -1.06
SLX1YBR228W UBP1P25037 809 aa8.39□□□□□ -1.07
SLX1YBR228W SPR3P41901 512 aa8.39□□□□□ -1.07
SLX1YBR228W MTO1P53070 669 aa8.39□□□□□ -1.07
SLX1YBR228W RGP1P16664 663 aa8.38□□□□□ -1.07
SLX1YBR228W VAN1P23642 535 aa8.38□□□□□ -1.07
SLX1YBR228W UBX7P38349 436 aa8.38□□□□□ -1.07
SLX1YBR228W SBE2P42223 864 aaKnown RBP8.36□□□□□ -1.07
SLX1YBR228W YNR014WP53719 212 aa8.36□□□□□ -1.07
SLX1YBR228W RPP1AP05318 106 aaPredicted RBP8.35□□□□□ -1.07
SLX1YBR228W NGR1P32831 672 aaKnown RBP8.35□□□□□ -1.07
SLX1YBR228W SCD5P34758 872 aa8.35□□□□□ -1.07
SLX1YBR228W GPM1P00950 247 aaKnown RBP8.34□□□□□ -1.07
SLX1YBR228W YFL066CP43538 392 aa8.34□□□□□ -1.07
SLX1YBR228W CWH41P53008 833 aa8.34□□□□□ -1.07
SLX1YBR228W TRS33Q99394 268 aa8.33□□□□□ -1.08
SLX1YBR228W HXT5P38695 592 aa8.31□□□□□ -1.08
SLX1YBR228W FOX2Q02207 900 aaKnown RBP8.31□□□□□ -1.08
SLX1YBR228W TY1A-DR2Q03964 440 aaKnown RBP8.31□□□□□ -1.08
SLX1YBR228W TDA6Q06466 467 aa8.31□□□□□ -1.08
SLX1YBR228W UTP4Q06679 776 aaKnown RBP8.31□□□□□ -1.08
SLX1YBR228W LSB3P43603 459 aaKnown RBP8.3□□□□□ -1.08
SLX1YBR228W PDC5P16467 563 aaKnown RBP8.29□□□□□ -1.08
SLX1YBR228W PUP1P25043 261 aa8.29□□□□□ -1.08
SLX1YBR228W YPR053CQ6Q5F3 151 aa8.29□□□□□ -1.08
SLX1YBR228W KNS1P32350 737 aaPredicted RBP8.28□□□□□ -1.08
SLX1YBR228W MSC7P38694 644 aa8.28□□□□□ -1.08
SLX1YBR228W BOI2P39969 1040 aa8.28□□□□□ -1.08
SLX1YBR228W SSA4P22202 642 aaKnown RBP8.27□□□□□ -1.09
SLX1YBR228W KAP122P32767 1081 aa8.27□□□□□ -1.09
SLX1YBR228W NCL1P38205 684 aaKnown RBP8.26□□□□□ -1.09
SLX1YBR228W QDR2P40474 542 aa8.26□□□□□ -1.09
SLX1YBR228W CUS1Q02554 436 aaPredicted RBP8.26□□□□□ -1.09
SLX1YBR228W SUV3P32580 737 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms