RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	UTR2	P32623	467 aa		7.35	□□□□□ -1.23
RXT2	YBR095C	SSA2	P10592	639 aa	Known RBP	7.34	□□□□□ -1.23
RXT2	YBR095C	TBS1	P38114	1094 aa		7.34	□□□□□ -1.23
RXT2	YBR095C	LSB6	P42951	607 aa		7.34	□□□□□ -1.23
RXT2	YBR095C	ISR1	Q06098	443 aa	Known RBP	7.33	□□□□□ -1.24
RXT2	YBR095C	KNS1	P32350	737 aa	Predicted RBP	7.32	□□□□□ -1.24
RXT2	YBR095C	SLN1	P39928	1220 aa	Predicted RBP	7.32	□□□□□ -1.24
RXT2	YBR095C	APL6	P46682	809 aa		7.32	□□□□□ -1.24
RXT2	YBR095C	TAT1	P38085	619 aa		7.31	□□□□□ -1.24
RXT2	YBR095C	JJJ2	P46997	583 aa		7.31	□□□□□ -1.24
RXT2	YBR095C	IRE1	P32361	1115 aa		7.3	□□□□□ -1.24
RXT2	YBR095C	ALA1	P40825	983 aa	Known RBP	7.3	□□□□□ -1.24
RXT2	YBR095C	SUM1	P46676	1062 aa		7.3	□□□□□ -1.24
RXT2	YBR095C	MAC1	P35192	417 aa		7.29	□□□□□ -1.24
RXT2	YBR095C	MCA1	Q08601	432 aa		7.28	□□□□□ -1.24
RXT2	YBR095C	PDC5	P16467	563 aa	Known RBP	7.27	□□□□□ -1.25
RXT2	YBR095C	CSE4	P36012	229 aa		7.26	□□□□□ -1.25
RXT2	YBR095C	MRPL16	P38064	232 aa		7.26	□□□□□ -1.25
RXT2	YBR095C	UTP7	P40055	554 aa	Known RBP	7.26	□□□□□ -1.25
RXT2	YBR095C	EMP47	P43555	445 aa		7.25	□□□□□ -1.25
RXT2	YBR095C	SPT5	P27692	1063 aa	Known RBP	7.23	□□□□□ -1.25
RXT2	YBR095C	RPP1A	P05318	106 aa	Predicted RBP	7.22	□□□□□ -1.25
RXT2	YBR095C	SHM1	P37292	490 aa	Predicted RBP	7.22	□□□□□ -1.25
RXT2	YBR095C	PSH1	Q12161	406 aa		7.22	□□□□□ -1.25
RXT2	YBR095C	MCM16	Q12262	181 aa		7.22	□□□□□ -1.25
RXT2	YBR095C	PDC6	P26263	563 aa	Known RBP	7.21	□□□□□ -1.26
RXT2	YBR095C	SLX8	P40072	274 aa		7.21	□□□□□ -1.26
RXT2	YBR095C	IRC24	P40580	263 aa		7.21	□□□□□ -1.26
RXT2	YBR095C	SPR3	P41901	512 aa		7.21	□□□□□ -1.26
RXT2	YBR095C	YPL034W	Q03083	165 aa		7.21	□□□□□ -1.26
RXT2	YBR095C	TY1A-DR2	Q03964	440 aa	Known RBP	7.21	□□□□□ -1.26
RXT2	YBR095C	STB3	Q12427	513 aa		7.21	□□□□□ -1.26
RXT2	YBR095C	HAL5	P38970	855 aa	Known RBP	7.2	□□□□□ -1.26
RXT2	YBR095C	UTP13	Q05946	817 aa	Known RBP	7.2	□□□□□ -1.26
RXT2	YBR095C	ATG3	P40344	310 aa		7.18	□□□□□ -1.26
RXT2	YBR095C	PRY1	P47032	299 aa		7.18	□□□□□ -1.26
RXT2	YBR095C	ISF1	P32488	338 aa		7.17	□□□□□ -1.26
RXT2	YBR095C	TPS3	P38426	1054 aa	Known RBP	7.15	□□□□□ -1.26
RXT2	YBR095C	INP52	P50942	1183 aa		7.14	□□□□□ -1.27
RXT2	YBR095C	ALO1	P54783	526 aa	Known RBP	7.14	□□□□□ -1.27
RXT2	YBR095C	HDA3	Q06623	655 aa		7.14	□□□□□ -1.27
RXT2	YBR095C	LEU1	P07264	779 aa	Known RBP	7.13	□□□□□ -1.27
RXT2	YBR095C	OMA1	P36163	345 aa		7.13	□□□□□ -1.27
RXT2	YBR095C	RPS31	P05759	152 aa	Known RBP	7.12	□□□□□ -1.27
RXT2	YBR095C	HPC2	Q01448	625 aa		7.12	□□□□□ -1.27
RXT2	YBR095C	MSC7	P38694	644 aa		7.11	□□□□□ -1.27
RXT2	YBR095C	SOH1	P38633	127 aa		7.1	□□□□□ -1.27
RXT2	YBR095C	YPQ2	Q06328	317 aa		7.1	□□□□□ -1.27
RXT2	YBR095C	YPP1	P46951	817 aa		7.09	□□□□□ -1.27
RXT2	YBR095C	NHA1	Q99271	985 aa		7.09	□□□□□ -1.27
RXT2	YBR095C	KIN1	P13185	1064 aa		7.07	□□□□□ -1.28
RXT2	YBR095C	BUD9	P53226	547 aa		7.07	□□□□□ -1.28
RXT2	YBR095C	TFB3	Q03290	321 aa		7.07	□□□□□ -1.28
RXT2	YBR095C	RGP1	P16664	663 aa		7.06	□□□□□ -1.28
RXT2	YBR095C	YDJ1	P25491	409 aa	Known RBP	7.05	□□□□□ -1.28
RXT2	YBR095C	YBL036C	P38197	257 aa		7.05	□□□□□ -1.28
RXT2	YBR095C	ALD2	P47771	506 aa		7.05	□□□□□ -1.28
RXT2	YBR095C	HEH2	Q03281	663 aa		7.05	□□□□□ -1.28
RXT2	YBR095C	SWI5	P08153	709 aa		7.03	□□□□□ -1.28
RXT2	YBR095C	MCM1	P11746	286 aa		7.03	□□□□□ -1.28
RXT2	YBR095C	YTA6	P40328	754 aa		7.03	□□□□□ -1.28
RXT2	YBR095C	PGM2	P37012	569 aa	Known RBP	7.02	□□□□□ -1.29
RXT2	YBR095C	ALG14	P38242	237 aa		7.02	□□□□□ -1.29
RXT2	YBR095C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.02	□□□□□ -1.29	not detected
RXT2	YBR095C	AI3	P03877	415 aa		7.01	□□□□□ -1.29
RXT2	YBR095C	PGM1	P33401	570 aa	Known RBP	7.01	□□□□□ -1.29
RXT2	YBR095C	LEU3	P08638	886 aa		6.99	□□□□□ -1.29
RXT2	YBR095C	AIM9	P40053	627 aa	Known RBP	6.97	□□□□□ -1.29
RXT2	YBR095C	YFL034W	P43564	1073 aa		6.97	□□□□□ -1.29
RXT2	YBR095C	AVT1	P47082	602 aa		6.97	□□□□□ -1.29
RXT2	YBR095C	SAC7	P17121	654 aa		6.96	□□□□□ -1.3
RXT2	YBR095C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.96	□□□□□ -1.3	not detected
RXT2	YBR095C	GUA1	P38625	525 aa	Known RBP	6.96	□□□□□ -1.3
RXT2	YBR095C	YNL165W	P53891	406 aa		6.96	□□□□□ -1.3
RXT2	YBR095C	PRK1	P40494	810 aa		6.95	□□□□□ -1.3
RXT2	YBR095C	ARI1	P53111	347 aa	Known RBP	6.95	□□□□□ -1.3
RXT2	YBR095C	GIS4	Q04233	774 aa		6.95	□□□□□ -1.3
RXT2	YBR095C	RPS6A	P0CX37	236 aa	Known RBP	6.94	□□□□□ -1.3
RXT2	YBR095C	RPS6B	P0CX38	236 aa	Predicted RBP	6.94	□□□□□ -1.3
RXT2	YBR095C	NAR1	P23503	491 aa	Known RBP	6.94	□□□□□ -1.3
RXT2	YBR095C	SFA1	P32771	386 aa		6.93	□□□□□ -1.3
RXT2	YBR095C	MED7	Q08278	222 aa		6.93	□□□□□ -1.3
RXT2	YBR095C	SUP45	P12385	437 aa	Known RBP	6.92	□□□□□ -1.3
RXT2	YBR095C	MLF3	P32047	452 aa		6.92	□□□□□ -1.3
RXT2	YBR095C	BRL1	P38770	471 aa		6.92	□□□□□ -1.3
RXT2	YBR095C	NCL1	P38205	684 aa	Known RBP	6.91	□□□□□ -1.3
RXT2	YBR095C	AOS1	Q06624	347 aa		6.91	□□□□□ -1.3
RXT2	YBR095C	SKP1	P52286	194 aa		6.9	□□□□□ -1.3
RXT2	YBR095C	COQ2	P32378	372 aa		6.89	□□□□□ -1.31
RXT2	YBR095C	KAE1	P36132	386 aa		6.89	□□□□□ -1.31
RXT2	YBR095C	LEO1	P38439	464 aa		6.89	□□□□□ -1.31
RXT2	YBR095C	RRM3	P38766	723 aa		6.89	□□□□□ -1.31
RXT2	YBR095C	Q0182	Q9ZZW1	134 aa		6.89	□□□□□ -1.31
RXT2	YBR095C	ELM1	P32801	640 aa		6.87	□□□□□ -1.31
RXT2	YBR095C	NTH2	P35172	780 aa		6.87	□□□□□ -1.31
RXT2	YBR095C	RPN1	P38764	993 aa	Known RBP	6.87	□□□□□ -1.31
RXT2	YBR095C	ENO2	P00925	437 aa	Known RBP	6.86	□□□□□ -1.31
RXT2	YBR095C	BIO2	P32451	375 aa		6.86	□□□□□ -1.31
RXT2	YBR095C	YKR073C	P36153	106 aa		6.86	□□□□□ -1.31
RXT2	YBR095C	RIM21	P48565	533 aa		6.86	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms