RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C CDC19P00549 500 aaKnown RBP8.48□□□□□ -1.05
RTG3YBL103C TTI1P36097 1038 aa8.48□□□□□ -1.05
RTG3YBL103C MSN5P52918 1224 aa8.48□□□□□ -1.05
RTG3YBL103C ALA1P40825 983 aaKnown RBP8.47□□□□□ -1.05
RTG3YBL103C TY1A-MR1Q04215 440 aa8.47□□□□□ -1.05
RTG3YBL103C TSC13Q99190 310 aa8.47□□□□□ -1.05
RTG3YBL103C NTH2P35172 780 aa8.46□□□□□ -1.05
RTG3YBL103C YFL034WP43564 1073 aa8.46□□□□□ -1.05
RTG3YBL103C NAM8Q00539 523 aaKnown RBP8.46□□□□□ -1.05
RTG3YBL103C RPS6AP0CX37 236 aaKnown RBP8.45□□□□□ -1.06
RTG3YBL103C RPS6BP0CX38 236 aaPredicted RBP8.45□□□□□ -1.06
RTG3YBL103C SIS2P36024 562 aa8.45□□□□□ -1.06
RTG3YBL103C TY1A-DR3Q12441 440 aa8.45□□□□□ -1.06
RTG3YBL103C SLA1P32790 1244 aa8.45□□□□□ -1.06
RTG3YBL103C ACS2P52910 683 aaKnown RBP8.44□□□□□ -1.06
RTG3YBL103C CPS1P27614 576 aa8.43□□□□□ -1.06
RTG3YBL103C AHP1P38013 176 aaKnown RBP8.43□□□□□ -1.06
RTG3YBL103C CCP1P00431 361 aa8.42□□□□□ -1.06
RTG3YBL103C PHO87P25360 923 aa8.42□□□□□ -1.06
RTG3YBL103C TGL4P36165 910 aa8.41□□□□□ -1.06
RTG3YBL103C JJJ2P46997 583 aa8.41□□□□□ -1.06
RTG3YBL103C YPQ2Q06328 317 aa8.41□□□□□ -1.06
RTG3YBL103C GAL2P13181 574 aa8.39□□□□□ -1.07
RTG3YBL103C UBP15P50101 1230 aa8.39□□□□□ -1.07
RTG3YBL103C HPF1Q05164 967 aa8.39□□□□□ -1.07
RTG3YBL103C HAP4P14064 554 aa8.38□□□□□ -1.07
RTG3YBL103C SHM1P37292 490 aaPredicted RBP8.38□□□□□ -1.07
RTG3YBL103C ECM23Q02710 187 aa8.38□□□□□ -1.07
RTG3YBL103C IRE1P32361 1115 aa8.38□□□□□ -1.07
RTG3YBL103C YGR035CP53222 116 aa8.38□□□□□ -1.07
RTG3YBL103C CYT1P07143 309 aa8.37□□□□□ -1.07
RTG3YBL103C CUZ1P53899 274 aa8.36□□□□□ -1.07
RTG3YBL103C ROM1P53046 1155 aa8.35□□□□□ -1.07
RTG3YBL103C GAS4Q08271 471 aa8.35□□□□□ -1.07
RTG3YBL103C YNL165WP53891 406 aa8.33□□□□□ -1.08
RTG3YBL103C RPS31P05759 152 aaKnown RBP8.32□□□□□ -1.08
RTG3YBL103C MCM1P11746 286 aa8.32□□□□□ -1.08
RTG3YBL103C PUP1P25043 261 aa8.32□□□□□ -1.08
RTG3YBL103C PSH1Q12161 406 aa8.32□□□□□ -1.08
RTG3YBL103C PDC6P26263 563 aaKnown RBP8.31□□□□□ -1.08
RTG3YBL103C UBX7P38349 436 aa8.31□□□□□ -1.08
RTG3YBL103C RLF2Q12495 606 aa8.31□□□□□ -1.08
RTG3YBL103C DIT1P21623 536 aa8.3□□□□□ -1.08
RTG3YBL103C TRK2P28584 889 aa8.3□□□□□ -1.08
RTG3YBL103C YMR265CQ03508 461 aaKnown RBP8.3□□□□□ -1.08
RTG3YBL103C SSA4P22202 642 aaKnown RBP8.29□□□□□ -1.08
RTG3YBL103C UBP1P25037 809 aa8.29□□□□□ -1.08
RTG3YBL103C CEM1P39525 442 aa8.28□□□□□ -1.08
RTG3YBL103C LYS5P50113 272 aa8.28□□□□□ -1.08
RTG3YBL103C RGA2Q06407 1009 aa8.28□□□□□ -1.08
RTG3YBL103C Q0182Q9ZZW1 134 aa8.28□□□□□ -1.08
RTG3YBL103C VAN1P23642 535 aa8.27□□□□□ -1.09
RTG3YBL103C KRE33P53914 1056 aaKnown RBP8.27□□□□□ -1.09
RTG3YBL103C MLF3P32047 452 aa8.26□□□□□ -1.09
RTG3YBL103C NGR1P32831 672 aaKnown RBP8.26□□□□□ -1.09
RTG3YBL103C YML083CQ04526 418 aa8.26□□□□□ -1.09
RTG3YBL103C DPH6Q12429 685 aa8.26□□□□□ -1.09
RTG3YBL103C MRPL16P38064 232 aa8.26□□□□□ -1.09
RTG3YBL103C NOB1Q08444 459 aaKnown RBP8.26□□□□□ -1.09
RTG3YBL103C ADE12P80210 433 aaKnown RBP8.25□□□□□ -1.09
RTG3YBL103C YTA6P40328 754 aa8.24□□□□□ -1.09
RTG3YBL103C JJJ3P47138 172 aa8.24□□□□□ -1.09
RTG3YBL103C ALD2P47771 506 aa8.23□□□□□ -1.09
RTG3YBL103C SYT1Q06836 1226 aa8.23□□□□□ -1.09
RTG3YBL103C STB3Q12427 513 aa8.23□□□□□ -1.09
RTG3YBL103C LEU1P07264 779 aaKnown RBP8.22□□□□□ -1.09
RTG3YBL103C TRS33Q99394 268 aa8.22□□□□□ -1.09
RTG3YBL103C SUV3P32580 737 aa8.21□□□□□ -1.09
RTG3YBL103C HXT5P38695 592 aa8.21□□□□□ -1.09
RTG3YBL103C YDR461C-AQ2V2P7 80 aa8.2□□□□□ -1.1
RTG3YBL103C CWH41P53008 833 aa8.19□□□□□ -1.1
RTG3YBL103C SCD5P34758 872 aa8.19□□□□□ -1.1
RTG3YBL103C SPR3P41901 512 aa8.19□□□□□ -1.1
RTG3YBL103C SUB2Q07478 446 aaKnown RBP8.19□□□□□ -1.1
RTG3YBL103C MTO1P53070 669 aa8.18□□□□□ -1.1
RTG3YBL103C RGP1P16664 663 aa8.17□□□□□ -1.1
RTG3YBL103C FPS1P23900 669 aa8.17□□□□□ -1.1
RTG3YBL103C UTP4Q06679 776 aaKnown RBP8.17□□□□□ -1.1
RTG3YBL103C CAB1Q04430 367 aa8.16□□□□□ -1.1
RTG3YBL103C FOX2Q02207 900 aaKnown RBP8.15□□□□□ -1.1
RTG3YBL103C PUN1Q06991 263 aa8.15□□□□□ -1.1
RTG3YBL103C PUF6Q04373 656 aaKnown RBP8.14□□□□□ -1.11
RTG3YBL103C ALD4P46367 519 aaKnown RBP8.13□□□□□ -1.11
RTG3YBL103C KAP122P32767 1081 aa8.12□□□□□ -1.11
RTG3YBL103C YBR197CP38306 217 aa8.12□□□□□ -1.11
RTG3YBL103C QDR2P40474 542 aa8.11□□□□□ -1.11
RTG3YBL103C CWC15Q03772 175 aaKnown RBP8.11□□□□□ -1.11
RTG3YBL103C MDJ1P35191 511 aa8.1□□□□□ -1.11
RTG3YBL103C MRPL33P20084 86 aa8.09□□□□□ -1.11
RTG3YBL103C MSC7P38694 644 aa8.09□□□□□ -1.11
RTG3YBL103C CUS1Q02554 436 aaPredicted RBP8.09□□□□□ -1.11
RTG3YBL103C SRS2P12954 1174 aa8.08□□□□□ -1.12
RTG3YBL103C TPS3P38426 1054 aaKnown RBP8.08□□□□□ -1.12
RTG3YBL103C TY1A-DR2Q03964 440 aaKnown RBP8.08□□□□□ -1.12
RTG3YBL103C THI72Q08579 599 aa8.08□□□□□ -1.12
RTG3YBL103C GPM1P00950 247 aaKnown RBP8.07□□□□□ -1.12
RTG3YBL103C AI1P03875 834 aa8.07□□□□□ -1.12
RTG3YBL103C RPP1AP05318 106 aaPredicted RBP8.07□□□□□ -1.12
RTG3YBL103C VMA3P25515 160 aa8.07□□□□□ -1.12
RTG3YBL103C ISC10P32645 267 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 442.5 ms