RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 ZNF516Q92618 1163 aa12.8□□□□□ -0.36
CASC19-240ENST00000641578 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
CASC19-240ENST00000641578 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
CASC19-240ENST00000641578 DDX12PQ92771 950 aa12.79□□□□□ -0.36
CASC19-240ENST00000641578 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
CASC19-240ENST00000641578 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
CASC19-240ENST00000641578 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
CASC19-240ENST00000641578 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
CASC19-240ENST00000641578 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
CASC19-240ENST00000641578 EEA1Q15075 1411 aa12.77□□□□□ -0.37
CASC19-240ENST00000641578 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
CASC19-240ENST00000641578 SMAPO00193 183 aa12.76□□□□□ -0.37
CASC19-240ENST00000641578 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CASC19-240ENST00000641578 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CASC19-240ENST00000641578 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
CASC19-240ENST00000641578 CHD1O14646 1710 aa12.73□□□□□ -0.37
CASC19-240ENST00000641578 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CASC19-240ENST00000641578 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 MAP3K7O43318 606 aa12.71□□□□□ -0.37
CASC19-240ENST00000641578 NBR1Q14596 966 aa12.71□□□□□ -0.37
CASC19-240ENST00000641578 CUX1P39880 1505 aa12.71□□□□□ -0.38
CASC19-240ENST00000641578 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
CASC19-240ENST00000641578 APLP1P51693 650 aa12.7□□□□□ -0.38
CASC19-240ENST00000641578 PRSS12P56730 875 aa12.68□□□□□ -0.38
CASC19-240ENST00000641578 SOGA1O94964 1423 aa12.67□□□□□ -0.38
CASC19-240ENST00000641578 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
CASC19-240ENST00000641578 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
CASC19-240ENST00000641578 TATDN2Q93075 761 aa12.66□□□□□ -0.38
CASC19-240ENST00000641578 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
CASC19-240ENST00000641578 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
CASC19-240ENST00000641578 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
CASC19-240ENST00000641578 GGCXP38435 758 aa12.63□□□□□ -0.39
CASC19-240ENST00000641578 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
CASC19-240ENST00000641578 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
CASC19-240ENST00000641578 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
CASC19-240ENST00000641578 RNF40O75150 1001 aa12.62□□□□□ -0.39
CASC19-240ENST00000641578 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
CASC19-240ENST00000641578 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
CASC19-240ENST00000641578 POTECB2RU33 542 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
CASC19-240ENST00000641578 PDIA6Q15084 440 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 COPS2P61201 443 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 MYT1Q01538 1121 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
CASC19-240ENST00000641578 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
CASC19-240ENST00000641578 KIF21BO75037 1637 aa12.57□□□□□ -0.4
CASC19-240ENST00000641578 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
CASC19-240ENST00000641578 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
CASC19-240ENST00000641578 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
CASC19-240ENST00000641578 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
CASC19-240ENST00000641578 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
CASC19-240ENST00000641578 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
CASC19-240ENST00000641578 ZPR1O75312 459 aa12.54□□□□□ -0.4
CASC19-240ENST00000641578 DGAT1O75907 488 aa12.53□□□□□ -0.4
CASC19-240ENST00000641578 SLC19A1P41440 591 aa12.53□□□□□ -0.4
CASC19-240ENST00000641578 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
CASC19-240ENST00000641578 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
CASC19-240ENST00000641578 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 LCE2AQ5TA79 106 aaPredicted RBP12.5□□□□□ -0.41
CASC19-240ENST00000641578 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20EP86478 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20CP86479 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20DP86480 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20BP86481 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20AP86496 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
CASC19-240ENST00000641578 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CASC19-240ENST00000641578 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
CASC19-240ENST00000641578 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
CASC19-240ENST00000641578 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CASC19-240ENST00000641578 TTC13Q8NBP0 860 aa12.44□□□□□ -0.42
CASC19-240ENST00000641578 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
CASC19-240ENST00000641578 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
CASC19-240ENST00000641578 OSBPP22059 807 aa12.42□□□□□ -0.42
CASC19-240ENST00000641578 IGF1RP08069 1367 aa12.42□□□□□ -0.42
CASC19-240ENST00000641578 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
CASC19-240ENST00000641578 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 GDF9O60383 454 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 LIAT1Q6ZQX7 453 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms