RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 ZNF516Q92618 1163 aa12.8□□□□□ -0.36
CASC19-240ENST00000641578 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
CASC19-240ENST00000641578 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
CASC19-240ENST00000641578 DDX12PQ92771 950 aa12.79□□□□□ -0.36
CASC19-240ENST00000641578 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
CASC19-240ENST00000641578 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
CASC19-240ENST00000641578 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
CASC19-240ENST00000641578 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
CASC19-240ENST00000641578 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
CASC19-240ENST00000641578 EEA1Q15075 1411 aa12.77□□□□□ -0.37
CASC19-240ENST00000641578 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
CASC19-240ENST00000641578 SMAPO00193 183 aa12.76□□□□□ -0.37
CASC19-240ENST00000641578 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CASC19-240ENST00000641578 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CASC19-240ENST00000641578 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
CASC19-240ENST00000641578 CHD1O14646 1710 aa12.73□□□□□ -0.37
CASC19-240ENST00000641578 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CASC19-240ENST00000641578 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
CASC19-240ENST00000641578 MAP3K7O43318 606 aa12.71□□□□□ -0.37
CASC19-240ENST00000641578 NBR1Q14596 966 aa12.71□□□□□ -0.37
CASC19-240ENST00000641578 CUX1P39880 1505 aa12.71□□□□□ -0.38
CASC19-240ENST00000641578 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
CASC19-240ENST00000641578 APLP1P51693 650 aa12.7□□□□□ -0.38
CASC19-240ENST00000641578 PRSS12P56730 875 aa12.68□□□□□ -0.38
CASC19-240ENST00000641578 SOGA1O94964 1423 aa12.67□□□□□ -0.38
CASC19-240ENST00000641578 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
CASC19-240ENST00000641578 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
CASC19-240ENST00000641578 TATDN2Q93075 761 aa12.66□□□□□ -0.38
CASC19-240ENST00000641578 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
CASC19-240ENST00000641578 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
CASC19-240ENST00000641578 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
CASC19-240ENST00000641578 GGCXP38435 758 aa12.63□□□□□ -0.39
CASC19-240ENST00000641578 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
CASC19-240ENST00000641578 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
CASC19-240ENST00000641578 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
CASC19-240ENST00000641578 RNF40O75150 1001 aa12.62□□□□□ -0.39
CASC19-240ENST00000641578 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
CASC19-240ENST00000641578 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
CASC19-240ENST00000641578 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
CASC19-240ENST00000641578 POTECB2RU33 542 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
CASC19-240ENST00000641578 PDIA6Q15084 440 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
CASC19-240ENST00000641578 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 COPS2P61201 443 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 MYT1Q01538 1121 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CASC19-240ENST00000641578 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
CASC19-240ENST00000641578 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
CASC19-240ENST00000641578 KIF21BO75037 1637 aa12.57□□□□□ -0.4
CASC19-240ENST00000641578 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
CASC19-240ENST00000641578 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
CASC19-240ENST00000641578 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
CASC19-240ENST00000641578 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
CASC19-240ENST00000641578 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
CASC19-240ENST00000641578 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
CASC19-240ENST00000641578 ZPR1O75312 459 aa12.54□□□□□ -0.4
CASC19-240ENST00000641578 DGAT1O75907 488 aa12.53□□□□□ -0.4
CASC19-240ENST00000641578 SLC19A1P41440 591 aa12.53□□□□□ -0.4
CASC19-240ENST00000641578 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
CASC19-240ENST00000641578 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
CASC19-240ENST00000641578 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
CASC19-240ENST00000641578 LCE2AQ5TA79 106 aaPredicted RBP12.5□□□□□ -0.41
CASC19-240ENST00000641578 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20EP86478 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20CP86479 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20DP86480 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20BP86481 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRR20AP86496 221 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
CASC19-240ENST00000641578 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
CASC19-240ENST00000641578 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
CASC19-240ENST00000641578 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
CASC19-240ENST00000641578 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CASC19-240ENST00000641578 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
CASC19-240ENST00000641578 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
CASC19-240ENST00000641578 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CASC19-240ENST00000641578 TTC13Q8NBP0 860 aa12.44□□□□□ -0.42
CASC19-240ENST00000641578 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
CASC19-240ENST00000641578 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
CASC19-240ENST00000641578 OSBPP22059 807 aa12.42□□□□□ -0.42
CASC19-240ENST00000641578 IGF1RP08069 1367 aa12.42□□□□□ -0.42
CASC19-240ENST00000641578 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
CASC19-240ENST00000641578 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
CASC19-240ENST00000641578 GDF9O60383 454 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 LIAT1Q6ZQX7 453 aa12.4□□□□□ -0.42
CASC19-240ENST00000641578 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms