RNA–Protein interactions for RNA: ENST00000638298.1

RTTN-212, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-212ENST00000638298 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
RTTN-212ENST00000638298 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
RTTN-212ENST00000638298 HPS5Q9UPZ3 1129 aa13.61□□□□□ -0.23
RTTN-212ENST00000638298 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
RTTN-212ENST00000638298 PRSS12P56730 875 aa13.59□□□□□ -0.23
RTTN-212ENST00000638298 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
RTTN-212ENST00000638298 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
RTTN-212ENST00000638298 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
RTTN-212ENST00000638298 SOGA1O94964 1423 aa13.56□□□□□ -0.24
RTTN-212ENST00000638298 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
RTTN-212ENST00000638298 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
RTTN-212ENST00000638298 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
RTTN-212ENST00000638298 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
RTTN-212ENST00000638298 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
RTTN-212ENST00000638298 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
RTTN-212ENST00000638298 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
RTTN-212ENST00000638298 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
RTTN-212ENST00000638298 PPP4CP60510 307 aa13.52□□□□□ -0.25
RTTN-212ENST00000638298 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
RTTN-212ENST00000638298 OSBPP22059 807 aa13.51□□□□□ -0.25
RTTN-212ENST00000638298 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
RTTN-212ENST00000638298 TATDN2Q93075 761 aa13.5□□□□□ -0.25
RTTN-212ENST00000638298 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
RTTN-212ENST00000638298 SMAPO00193 183 aa13.48□□□□□ -0.25
RTTN-212ENST00000638298 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
RTTN-212ENST00000638298 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
RTTN-212ENST00000638298 C3orf80F5H4A9 247 aa13.46□□□□□ -0.25
RTTN-212ENST00000638298 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
RTTN-212ENST00000638298 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
RTTN-212ENST00000638298 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
RTTN-212ENST00000638298 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
RTTN-212ENST00000638298 TJAP1Q5JTD0 557 aa13.45□□□□□ -0.26
RTTN-212ENST00000638298 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
RTTN-212ENST00000638298 TTC13Q8NBP0 860 aa13.42□□□□□ -0.26
RTTN-212ENST00000638298 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
RTTN-212ENST00000638298 NUDT18Q6ZVK8 323 aa13.41□□□□□ -0.26
RTTN-212ENST00000638298 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
RTTN-212ENST00000638298 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
RTTN-212ENST00000638298 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
RTTN-212ENST00000638298 MTRQ99707 1265 aa13.38□□□□□ -0.27
RTTN-212ENST00000638298 NPDC1Q9NQX5 325 aaPredicted RBP13.38□□□□□ -0.27
RTTN-212ENST00000638298 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
RTTN-212ENST00000638298 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
RTTN-212ENST00000638298 CUX1P39880 1505 aa13.35□□□□□ -0.27
RTTN-212ENST00000638298 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
RTTN-212ENST00000638298 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
RTTN-212ENST00000638298 Q6ZNB5 142 aa13.34□□□□□ -0.27
RTTN-212ENST00000638298 APLP1P51693 650 aa13.33□□□□□ -0.28
RTTN-212ENST00000638298 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
RTTN-212ENST00000638298 RNF40O75150 1001 aa13.31□□□□□ -0.28
RTTN-212ENST00000638298 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
RTTN-212ENST00000638298 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
RTTN-212ENST00000638298 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
RTTN-212ENST00000638298 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
RTTN-212ENST00000638298 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
RTTN-212ENST00000638298 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
RTTN-212ENST00000638298 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
RTTN-212ENST00000638298 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
RTTN-212ENST00000638298 EYA1Q99502 592 aa13.28□□□□□ -0.28
RTTN-212ENST00000638298 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.28
RTTN-212ENST00000638298 PRKD2Q9BZL6 878 aa13.27□□□□□ -0.29
RTTN-212ENST00000638298 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
RTTN-212ENST00000638298 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.25□□□□□ -0.29
RTTN-212ENST00000638298 GFRA3O60609 400 aa13.23□□□□□ -0.29
RTTN-212ENST00000638298 PRR14Q9BWN1 585 aa13.23□□□□□ -0.29
RTTN-212ENST00000638298 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
RTTN-212ENST00000638298 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
RTTN-212ENST00000638298 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
RTTN-212ENST00000638298 NUP160Q12769 1436 aa13.22□□□□□ -0.29
RTTN-212ENST00000638298 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
RTTN-212ENST00000638298 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
RTTN-212ENST00000638298 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
RTTN-212ENST00000638298 PTGDRQ13258 359 aa13.2□□□□□ -0.3
RTTN-212ENST00000638298 GGCXP38435 758 aa13.19□□□□□ -0.3
RTTN-212ENST00000638298 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
RTTN-212ENST00000638298 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
RTTN-212ENST00000638298 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
RTTN-212ENST00000638298 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
RTTN-212ENST00000638298 ABCC10Q5T3U5 1492 aa13.18□□□□□ -0.3
RTTN-212ENST00000638298 KDM6BO15054 1643 aa13.18□□□□□ -0.3
RTTN-212ENST00000638298 LCE2BO14633 110 aa13.17□□□□□ -0.3
RTTN-212ENST00000638298 ZPR1O75312 459 aa13.17□□□□□ -0.3
RTTN-212ENST00000638298 DNAJB2P25686 324 aa13.17□□□□□ -0.3
RTTN-212ENST00000638298 COPS2P61201 443 aa13.17□□□□□ -0.3
RTTN-212ENST00000638298 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
RTTN-212ENST00000638298 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
RTTN-212ENST00000638298 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
RTTN-212ENST00000638298 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
RTTN-212ENST00000638298 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
RTTN-212ENST00000638298 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
RTTN-212ENST00000638298 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
RTTN-212ENST00000638298 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
RTTN-212ENST00000638298 DIP2BQ9P265 1576 aa13.13□□□□□ -0.31
RTTN-212ENST00000638298 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
RTTN-212ENST00000638298 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
RTTN-212ENST00000638298 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
RTTN-212ENST00000638298 MAPKBP1O60336 1514 aa13.08□□□□□ -0.31
RTTN-212ENST00000638298 BLOC1S3Q6QNY0 202 aa13.08□□□□□ -0.32
RTTN-212ENST00000638298 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
RTTN-212ENST00000638298 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms