RNA–Protein interactions for RNA: ENST00000638298.1

RTTN-212, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-212ENST00000638298 AEBP2Q6ZN18 517 aaPredicted RBP34.47■■■■□ 3.11
RTTN-212ENST00000638298 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
RTTN-212ENST00000638298 SENP3Q9H4L4 574 aaPredicted RBP29.48■■■□□ 2.31
RTTN-212ENST00000638298 PHF23Q9BUL5 403 aaPredicted RBP29.04■■■□□ 2.24
RTTN-212ENST00000638298 FOXD1Q16676 465 aa27.42■■□□□ 1.98
RTTN-212ENST00000638298 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
RTTN-212ENST00000638298 MSH5O43196 834 aa25.76■■□□□ 1.71
RTTN-212ENST00000638298 PIAS4Q8N2W9 510 aaPredicted RBP25.61■■□□□ 1.69
RTTN-212ENST00000638298 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
RTTN-212ENST00000638298 ADRA2BP18089 450 aa25.47■■□□□ 1.67
RTTN-212ENST00000638298 POTEDQ86YR6 584 aa25.14■■□□□ 1.62
RTTN-212ENST00000638298 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
RTTN-212ENST00000638298 MAPK8IP2Q13387 824 aaPredicted RBP23.39■■□□□ 1.33
RTTN-212ENST00000638298 DMRT2Q9Y5R5 561 aa23.37■■□□□ 1.33
RTTN-212ENST00000638298 PPP4R3CPQ6ZMV5 832 aa22.87■■□□□ 1.25
RTTN-212ENST00000638298 HOXD11P31277 338 aaPredicted RBP22.52■■□□□ 1.2
RTTN-212ENST00000638298 CNKSR2Q8WXI2 1034 aa22.5■■□□□ 1.19
RTTN-212ENST00000638298 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
RTTN-212ENST00000638298 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
RTTN-212ENST00000638298 CACNB1Q02641 598 aaPredicted RBP22.04■■□□□ 1.12
RTTN-212ENST00000638298 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
RTTN-212ENST00000638298 RNF39Q9H2S5 420 aa21.95■■□□□ 1.1
RTTN-212ENST00000638298 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
RTTN-212ENST00000638298 NPM3O75607 178 aaKnown RBP21.67■■□□□ 1.06
RTTN-212ENST00000638298 C1QBPQ07021 282 aaKnown RBP21.65■■□□□ 1.06
RTTN-212ENST00000638298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.01
RTTN-212ENST00000638298 KCNA4P22459 653 aa21.19■□□□□ 0.98
RTTN-212ENST00000638298 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
RTTN-212ENST00000638298 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
RTTN-212ENST00000638298 SPINK5Q9NQ38 1064 aaPredicted RBP20.61■□□□□ 0.89
RTTN-212ENST00000638298 CAPN15O75808 1086 aa20.57■□□□□ 0.88
RTTN-212ENST00000638298 DSG3P32926 999 aa20.52■□□□□ 0.88
RTTN-212ENST00000638298 APLP2Q06481 763 aa20.44■□□□□ 0.86
RTTN-212ENST00000638298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
RTTN-212ENST00000638298 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
RTTN-212ENST00000638298 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
RTTN-212ENST00000638298 SAMD1Q6SPF0 538 aaPredicted RBP20.27■□□□□ 0.84
RTTN-212ENST00000638298 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
RTTN-212ENST00000638298 MYCNP04198 464 aaPredicted RBP20.08■□□□□ 0.81
RTTN-212ENST00000638298 ABCB7O75027 752 aa20.06■□□□□ 0.8
RTTN-212ENST00000638298 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
RTTN-212ENST00000638298 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
RTTN-212ENST00000638298 POLA2Q14181 598 aa19.7■□□□□ 0.74
RTTN-212ENST00000638298 POTEHQ6S545 545 aa19.7■□□□□ 0.74
RTTN-212ENST00000638298 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
RTTN-212ENST00000638298 ATF5Q9Y2D1 282 aaPredicted RBP19.54■□□□□ 0.72
RTTN-212ENST00000638298 ZBTB22O15209 634 aa19.47■□□□□ 0.71
RTTN-212ENST00000638298 ZBTB12Q9Y330 459 aaPredicted RBP19.4■□□□□ 0.7
RTTN-212ENST00000638298 ATXN8OSP0DMR3 200 aa19.3■□□□□ 0.68
RTTN-212ENST00000638298 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
RTTN-212ENST00000638298 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
RTTN-212ENST00000638298 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
RTTN-212ENST00000638298 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
RTTN-212ENST00000638298 FBLN2P98095 1184 aa18.84■□□□□ 0.61
RTTN-212ENST00000638298 SPDYE2BA6NHP3 402 aa18.77■□□□□ 0.6
RTTN-212ENST00000638298 SPDYE6P0CI01 402 aa18.77■□□□□ 0.6
RTTN-212ENST00000638298 SPDYE2Q495Y8 402 aa18.77■□□□□ 0.6
RTTN-212ENST00000638298 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
RTTN-212ENST00000638298 PIP4P2Q8N4L2 257 aa18.69■□□□□ 0.58
RTTN-212ENST00000638298 MKRN4PQ13434 485 aaPredicted RBP18.67■□□□□ 0.58
RTTN-212ENST00000638298 FXR2P51116 673 aaKnown RBP eCLIP18.61■□□□□ 0.57
RTTN-212ENST00000638298 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
RTTN-212ENST00000638298 SSUH2Q9Y2M2 353 aa18.52■□□□□ 0.56
RTTN-212ENST00000638298 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
RTTN-212ENST00000638298 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
RTTN-212ENST00000638298 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
RTTN-212ENST00000638298 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
RTTN-212ENST00000638298 HAX1O00165 279 aa18.33■□□□□ 0.52
RTTN-212ENST00000638298 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
RTTN-212ENST00000638298 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
RTTN-212ENST00000638298 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
RTTN-212ENST00000638298 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
RTTN-212ENST00000638298 EVX2Q03828 476 aa18.08■□□□□ 0.48
RTTN-212ENST00000638298 PRR29P0C7W0 189 aa18.06■□□□□ 0.48
RTTN-212ENST00000638298 C19orf67A6NJJ6 358 aa18.01■□□□□ 0.47
RTTN-212ENST00000638298 CHADLQ6NUI6 762 aa17.97■□□□□ 0.47
RTTN-212ENST00000638298 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
RTTN-212ENST00000638298 FARP1Q9Y4F1 1045 aaPredicted RBP17.77■□□□□ 0.44
RTTN-212ENST00000638298 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
RTTN-212ENST00000638298 GABBR2O75899 941 aa17.72■□□□□ 0.43
RTTN-212ENST00000638298 CD44P16070 742 aaKnown RBP17.66■□□□□ 0.42
RTTN-212ENST00000638298 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
RTTN-212ENST00000638298 CLCN6P51797 869 aa17.56■□□□□ 0.4
RTTN-212ENST00000638298 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
RTTN-212ENST00000638298 PROM2Q8N271 834 aa17.42■□□□□ 0.38
RTTN-212ENST00000638298 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
RTTN-212ENST00000638298 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
RTTN-212ENST00000638298 MNX1P50219 401 aaPredicted RBP17.33■□□□□ 0.36
RTTN-212ENST00000638298 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTTN-212ENST00000638298 LHX8Q68G74 356 aa17.29■□□□□ 0.36
RTTN-212ENST00000638298 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
RTTN-212ENST00000638298 ABCC9O60706 1549 aa17.26■□□□□ 0.35
RTTN-212ENST00000638298 DCBLD2Q96PD2 775 aa17.22■□□□□ 0.35
RTTN-212ENST00000638298 GALR2O43603 387 aaPredicted RBP17.15■□□□□ 0.34
RTTN-212ENST00000638298 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
RTTN-212ENST00000638298 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
RTTN-212ENST00000638298 MIER1Q8N108 512 aa16.93■□□□□ 0.3
RTTN-212ENST00000638298 MS4A3Q96HJ5 214 aa16.91■□□□□ 0.3
RTTN-212ENST00000638298 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
RTTN-212ENST00000638298 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms