RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
LINC00520-206ENST00000560336 NESP48681 1621 aa12.78□□□□□ -0.36
LINC00520-206ENST00000560336 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
LINC00520-206ENST00000560336 GPR37O15354 613 aa12.76□□□□□ -0.37
LINC00520-206ENST00000560336 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
LINC00520-206ENST00000560336 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
LINC00520-206ENST00000560336 HIC1Q14526 733 aa12.75□□□□□ -0.37
LINC00520-206ENST00000560336 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
LINC00520-206ENST00000560336 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
LINC00520-206ENST00000560336 PTPN5P54829 565 aa12.74□□□□□ -0.37
LINC00520-206ENST00000560336 CUX1P39880 1505 aa12.73□□□□□ -0.37
LINC00520-206ENST00000560336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00520-206ENST00000560336 FECHP22830 423 aa12.72□□□□□ -0.37
LINC00520-206ENST00000560336 BCAMP50895 628 aa12.72□□□□□ -0.37
LINC00520-206ENST00000560336 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
LINC00520-206ENST00000560336 FAM9AQ8IZU1 332 aaPredicted RBP12.72□□□□□ -0.37
LINC00520-206ENST00000560336 GNPATO15228 680 aa12.71□□□□□ -0.37
LINC00520-206ENST00000560336 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
LINC00520-206ENST00000560336 EYA1Q99502 592 aa12.7□□□□□ -0.38
LINC00520-206ENST00000560336 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
LINC00520-206ENST00000560336 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
LINC00520-206ENST00000560336 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
LINC00520-206ENST00000560336 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
LINC00520-206ENST00000560336 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
LINC00520-206ENST00000560336 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
LINC00520-206ENST00000560336 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
LINC00520-206ENST00000560336 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
LINC00520-206ENST00000560336 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
LINC00520-206ENST00000560336 EEA1Q15075 1411 aa12.65□□□□□ -0.38
LINC00520-206ENST00000560336 SOGA1O94964 1423 aa12.64□□□□□ -0.39
LINC00520-206ENST00000560336 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
LINC00520-206ENST00000560336 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
LINC00520-206ENST00000560336 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
LINC00520-206ENST00000560336 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
LINC00520-206ENST00000560336 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
LINC00520-206ENST00000560336 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
LINC00520-206ENST00000560336 OATP04181 439 aa12.61□□□□□ -0.39
LINC00520-206ENST00000560336 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
LINC00520-206ENST00000560336 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
LINC00520-206ENST00000560336 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
LINC00520-206ENST00000560336 DNAJB2P25686 324 aa12.6□□□□□ -0.39
LINC00520-206ENST00000560336 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
LINC00520-206ENST00000560336 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
LINC00520-206ENST00000560336 RNF40O75150 1001 aa12.59□□□□□ -0.39
LINC00520-206ENST00000560336 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
LINC00520-206ENST00000560336 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
LINC00520-206ENST00000560336 PPP4CP60510 307 aa12.58□□□□□ -0.4
LINC00520-206ENST00000560336 KIF21BO75037 1637 aa12.58□□□□□ -0.4
LINC00520-206ENST00000560336 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
LINC00520-206ENST00000560336 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
LINC00520-206ENST00000560336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
LINC00520-206ENST00000560336 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
LINC00520-206ENST00000560336 BCANQ96GW7 911 aa12.55□□□□□ -0.4
LINC00520-206ENST00000560336 SLF2Q8IX21 1173 aa12.54□□□□□ -0.4
LINC00520-206ENST00000560336 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
LINC00520-206ENST00000560336 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
LINC00520-206ENST00000560336 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
LINC00520-206ENST00000560336 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
LINC00520-206ENST00000560336 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
LINC00520-206ENST00000560336 NLRP7Q8WX94 980 aa12.52□□□□□ -0.41
LINC00520-206ENST00000560336 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
LINC00520-206ENST00000560336 IRF6O14896 467 aa12.51□□□□□ -0.41
LINC00520-206ENST00000560336 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
LINC00520-206ENST00000560336 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
LINC00520-206ENST00000560336 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
LINC00520-206ENST00000560336 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
LINC00520-206ENST00000560336 CUX2O14529 1486 aa12.5□□□□□ -0.41
LINC00520-206ENST00000560336 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
LINC00520-206ENST00000560336 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
LINC00520-206ENST00000560336 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
LINC00520-206ENST00000560336 ZMYND10O75800 440 aa12.49□□□□□ -0.41
LINC00520-206ENST00000560336 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
LINC00520-206ENST00000560336 WDR62O43379 1518 aa12.47□□□□□ -0.41
LINC00520-206ENST00000560336 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
LINC00520-206ENST00000560336 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
LINC00520-206ENST00000560336 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
LINC00520-206ENST00000560336 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
LINC00520-206ENST00000560336 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
LINC00520-206ENST00000560336 APLP1P51693 650 aa12.46□□□□□ -0.41
LINC00520-206ENST00000560336 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
LINC00520-206ENST00000560336 CUL7Q14999 1698 aa12.45□□□□□ -0.42
LINC00520-206ENST00000560336 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
LINC00520-206ENST00000560336 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
LINC00520-206ENST00000560336 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
LINC00520-206ENST00000560336 SLC10A3P09131 477 aa12.43□□□□□ -0.42
LINC00520-206ENST00000560336 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
LINC00520-206ENST00000560336 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
LINC00520-206ENST00000560336 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
LINC00520-206ENST00000560336 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
LINC00520-206ENST00000560336 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
LINC00520-206ENST00000560336 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
LINC00520-206ENST00000560336 CFHP08603 1231 aa12.39□□□□□ -0.43
LINC00520-206ENST00000560336 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
LINC00520-206ENST00000560336 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
LINC00520-206ENST00000560336 TJAP1Q5JTD0 557 aa12.37□□□□□ -0.43
LINC00520-206ENST00000560336 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
LINC00520-206ENST00000560336 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
LINC00520-206ENST00000560336 MTRQ99707 1265 aa12.37□□□□□ -0.43
LINC00520-206ENST00000560336 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
LINC00520-206ENST00000560336 KCNC4Q03721 635 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms