RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
SMARCC2-213ENST00000552627 FAM198AQ9UFP1 575 aa9.68□□□□□ -0.86
SMARCC2-213ENST00000552627 IFT140Q96RY7 1462 aa9.67□□□□□ -0.86
SMARCC2-213ENST00000552627 RAD54L2Q9Y4B4 1467 aa9.67□□□□□ -0.86
SMARCC2-213ENST00000552627 SEPT9Q9UHD8 586 aaPredicted RBP9.67□□□□□ -0.86
SMARCC2-213ENST00000552627 EIF4G3O43432 1585 aaKnown RBP9.67□□□□□ -0.86
SMARCC2-213ENST00000552627 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
SMARCC2-213ENST00000552627 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
SMARCC2-213ENST00000552627 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
SMARCC2-213ENST00000552627 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
SMARCC2-213ENST00000552627 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.87
SMARCC2-213ENST00000552627 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 FAM98CQ17RN3 349 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 TATDN2Q93075 761 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 WNT2BQ93097 391 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
SMARCC2-213ENST00000552627 SMAPO00193 183 aa9.63□□□□□ -0.87
SMARCC2-213ENST00000552627 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
SMARCC2-213ENST00000552627 SOGA1O94964 1423 aa9.63□□□□□ -0.87
SMARCC2-213ENST00000552627 AQRO60306 1485 aaKnown RBP eCLIP9.62□□□□□ -0.871e-7■■■■■ 32
SMARCC2-213ENST00000552627 HIC1Q14526 733 aa9.62□□□□□ -0.87
SMARCC2-213ENST00000552627 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
SMARCC2-213ENST00000552627 ANKK1Q8NFD2 765 aa9.62□□□□□ -0.87
SMARCC2-213ENST00000552627 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-213ENST00000552627 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
SMARCC2-213ENST00000552627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCC2-213ENST00000552627 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
SMARCC2-213ENST00000552627 TDRD9Q8NDG6 1382 aaKnown RBP9.6□□□□□ -0.87
SMARCC2-213ENST00000552627 GNPATO15228 680 aa9.59□□□□□ -0.87
SMARCC2-213ENST00000552627 THSD4Q6ZMP0 1018 aa9.59□□□□□ -0.87
SMARCC2-213ENST00000552627 GPR37O15354 613 aa9.58□□□□□ -0.88
SMARCC2-213ENST00000552627 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
SMARCC2-213ENST00000552627 PTPN5P54829 565 aa9.57□□□□□ -0.88
SMARCC2-213ENST00000552627 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
SMARCC2-213ENST00000552627 EYA1Q99502 592 aa9.57□□□□□ -0.88
SMARCC2-213ENST00000552627 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 ADGRG1Q9Y653 693 aa9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 CHD1O14646 1710 aa9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
SMARCC2-213ENST00000552627 FECHP22830 423 aa9.55□□□□□ -0.88
SMARCC2-213ENST00000552627 BCAMP50895 628 aa9.55□□□□□ -0.88
SMARCC2-213ENST00000552627 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
SMARCC2-213ENST00000552627 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
SMARCC2-213ENST00000552627 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
SMARCC2-213ENST00000552627 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
SMARCC2-213ENST00000552627 OATP04181 439 aa9.53□□□□□ -0.88
SMARCC2-213ENST00000552627 SAMD7Q7Z3H4 446 aa9.53□□□□□ -0.88
SMARCC2-213ENST00000552627 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
SMARCC2-213ENST00000552627 BCANQ96GW7 911 aa9.52□□□□□ -0.89
SMARCC2-213ENST00000552627 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
SMARCC2-213ENST00000552627 DNAJB2P25686 324 aa9.5□□□□□ -0.89
SMARCC2-213ENST00000552627 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
SMARCC2-213ENST00000552627 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
SMARCC2-213ENST00000552627 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
SMARCC2-213ENST00000552627 RCCD1A6NED2 376 aa9.49□□□□□ -0.89
SMARCC2-213ENST00000552627 PXYLP1Q8TE99 480 aa9.49□□□□□ -0.89
SMARCC2-213ENST00000552627 PPP4CP60510 307 aa9.48□□□□□ -0.89
SMARCC2-213ENST00000552627 METTL3Q86U44 580 aaKnown RBP9.48□□□□□ -0.89
SMARCC2-213ENST00000552627 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
SMARCC2-213ENST00000552627 ADAMTS12P58397 1594 aa9.48□□□□□ -0.89
SMARCC2-213ENST00000552627 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 RNF40O75150 1001 aa9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 SLC4A3P48751 1232 aa9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
SMARCC2-213ENST00000552627 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
SMARCC2-213ENST00000552627 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
SMARCC2-213ENST00000552627 ZC3H15Q8WU90 426 aaKnown RBP9.46□□□□□ -0.9
SMARCC2-213ENST00000552627 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
SMARCC2-213ENST00000552627 IRF6O14896 467 aa9.45□□□□□ -0.9
SMARCC2-213ENST00000552627 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
SMARCC2-213ENST00000552627 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
SMARCC2-213ENST00000552627 ERICH3Q5RHP9 1530 aa9.44□□□□□ -0.9
SMARCC2-213ENST00000552627 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
SMARCC2-213ENST00000552627 KRI1Q8N9T8 703 aaKnown RBP9.43□□□□□ -0.9
SMARCC2-213ENST00000552627 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-213ENST00000552627 KIF27Q86VH2 1401 aa9.42□□□□□ -0.9
SMARCC2-213ENST00000552627 ZMYND10O75800 440 aa9.42□□□□□ -0.9
SMARCC2-213ENST00000552627 GRIN2AQ12879 1464 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 CEP170Q5SW79 1584 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
SMARCC2-213ENST00000552627 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
SMARCC2-213ENST00000552627 CUL7Q14999 1698 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 DAXXQ9UER7 740 aaPredicted RBP9.39□□□□□ -0.91
SMARCC2-213ENST00000552627 IGF1RP08069 1367 aa9.38□□□□□ -0.91
SMARCC2-213ENST00000552627 ARHGEF11O15085 1522 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms