RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
SMARCC2-213ENST00000552627 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
SMARCC2-213ENST00000552627 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
SMARCC2-213ENST00000552627 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
SMARCC2-213ENST00000552627 FOXD1Q16676 465 aa18.11■□□□□ 0.49
SMARCC2-213ENST00000552627 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
SMARCC2-213ENST00000552627 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
SMARCC2-213ENST00000552627 ADRA2BP18089 450 aa17.29■□□□□ 0.36
SMARCC2-213ENST00000552627 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
SMARCC2-213ENST00000552627 MSH5O43196 834 aa16.79■□□□□ 0.28
SMARCC2-213ENST00000552627 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
SMARCC2-213ENST00000552627 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
SMARCC2-213ENST00000552627 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
SMARCC2-213ENST00000552627 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
SMARCC2-213ENST00000552627 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
SMARCC2-213ENST00000552627 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
SMARCC2-213ENST00000552627 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
SMARCC2-213ENST00000552627 KCNA4P22459 653 aa15.3■□□□□ 0.04
SMARCC2-213ENST00000552627 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
SMARCC2-213ENST00000552627 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
SMARCC2-213ENST00000552627 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SMARCC2-213ENST00000552627 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
SMARCC2-213ENST00000552627 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
SMARCC2-213ENST00000552627 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
SMARCC2-213ENST00000552627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■■■■□ 23.4
SMARCC2-213ENST00000552627 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
SMARCC2-213ENST00000552627 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
SMARCC2-213ENST00000552627 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
SMARCC2-213ENST00000552627 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
SMARCC2-213ENST00000552627 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
SMARCC2-213ENST00000552627 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
SMARCC2-213ENST00000552627 ZBTB22O15209 634 aa14.06□□□□□ -0.16
SMARCC2-213ENST00000552627 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
SMARCC2-213ENST00000552627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
SMARCC2-213ENST00000552627 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
SMARCC2-213ENST00000552627 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
SMARCC2-213ENST00000552627 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
SMARCC2-213ENST00000552627 APLP2Q06481 763 aa13.89□□□□□ -0.19
SMARCC2-213ENST00000552627 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
SMARCC2-213ENST00000552627 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
SMARCC2-213ENST00000552627 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SMARCC2-213ENST00000552627 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
SMARCC2-213ENST00000552627 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
SMARCC2-213ENST00000552627 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
SMARCC2-213ENST00000552627 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
SMARCC2-213ENST00000552627 DSG3P32926 999 aa13.6□□□□□ -0.23
SMARCC2-213ENST00000552627 ABCB7O75027 752 aa13.53□□□□□ -0.24
SMARCC2-213ENST00000552627 POLA2Q14181 598 aa13.46□□□□□ -0.25
SMARCC2-213ENST00000552627 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
SMARCC2-213ENST00000552627 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
SMARCC2-213ENST00000552627 FBLN2P98095 1184 aa13.12□□□□□ -0.31
SMARCC2-213ENST00000552627 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-213ENST00000552627 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
SMARCC2-213ENST00000552627 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
SMARCC2-213ENST00000552627 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SMARCC2-213ENST00000552627 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SMARCC2-213ENST00000552627 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
SMARCC2-213ENST00000552627 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
SMARCC2-213ENST00000552627 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-213ENST00000552627 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
SMARCC2-213ENST00000552627 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
SMARCC2-213ENST00000552627 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-213ENST00000552627 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCC2-213ENST00000552627 FKBP8Q14318 412 aa12.56□□□□□ -0.4
SMARCC2-213ENST00000552627 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
SMARCC2-213ENST00000552627 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SMARCC2-213ENST00000552627 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
SMARCC2-213ENST00000552627 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
SMARCC2-213ENST00000552627 PROM2Q8N271 834 aa12.43□□□□□ -0.42
SMARCC2-213ENST00000552627 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
SMARCC2-213ENST00000552627 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
SMARCC2-213ENST00000552627 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■□□□□ 9.9
SMARCC2-213ENST00000552627 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
SMARCC2-213ENST00000552627 POTEHQ6S545 545 aa12.29□□□□□ -0.44
SMARCC2-213ENST00000552627 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
SMARCC2-213ENST00000552627 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
SMARCC2-213ENST00000552627 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
SMARCC2-213ENST00000552627 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
SMARCC2-213ENST00000552627 MIER1Q8N108 512 aa12.08□□□□□ -0.48
SMARCC2-213ENST00000552627 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
SMARCC2-213ENST00000552627 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-213ENST00000552627 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
SMARCC2-213ENST00000552627 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
SMARCC2-213ENST00000552627 HAX1O00165 279 aa11.98□□□□□ -0.49
SMARCC2-213ENST00000552627 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
SMARCC2-213ENST00000552627 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCC2-213ENST00000552627 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
SMARCC2-213ENST00000552627 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-213ENST00000552627 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
SMARCC2-213ENST00000552627 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
SMARCC2-213ENST00000552627 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-213ENST00000552627 EVX2Q03828 476 aa11.82□□□□□ -0.52
SMARCC2-213ENST00000552627 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-213ENST00000552627 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-213ENST00000552627 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
SMARCC2-213ENST00000552627 NUBP1P53384 320 aa11.75□□□□□ -0.53
SMARCC2-213ENST00000552627 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
SMARCC2-213ENST00000552627 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
SMARCC2-213ENST00000552627 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
SMARCC2-213ENST00000552627 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms