RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 NEBLO76041 1014 aa11.03□□□□□ -0.64
CLASP1-215ENST00000541377 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLASP1-215ENST00000541377 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
CLASP1-215ENST00000541377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
CLASP1-215ENST00000541377 TCERG1O14776 1098 aaKnown RBP11.03□□□□□ -0.64
CLASP1-215ENST00000541377 SYCP1Q15431 976 aa11.03□□□□□ -0.64
CLASP1-215ENST00000541377 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
CLASP1-215ENST00000541377 STRN4Q9NRL3 753 aa11.02□□□□□ -0.64
CLASP1-215ENST00000541377 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.64
CLASP1-215ENST00000541377 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.65
CLASP1-215ENST00000541377 CHMP4BP1P59074 171 aa11.02□□□□□ -0.65
CLASP1-215ENST00000541377 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.65
CLASP1-215ENST00000541377 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.65
CLASP1-215ENST00000541377 NECTIN2Q92692 538 aa11.02□□□□□ -0.65
CLASP1-215ENST00000541377 MFAP1P55081 439 aaKnown RBP11.02□□□□□ -0.65
CLASP1-215ENST00000541377 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
CLASP1-215ENST00000541377 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
CLASP1-215ENST00000541377 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
CLASP1-215ENST00000541377 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
CLASP1-215ENST00000541377 HOMER1Q86YM7 354 aa11.01□□□□□ -0.65
CLASP1-215ENST00000541377 GPS2Q13227 327 aa11.01□□□□□ -0.65
CLASP1-215ENST00000541377 XBP1P17861 261 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 MATR3P43243 847 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■■□ 25.8
CLASP1-215ENST00000541377 PKD2Q13563 968 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 GOLGA3Q08378 1498 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 PDE3BQ13370 1112 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 ZRSR2Q15696 482 aaKnown RBP11□□□□□ -0.65
CLASP1-215ENST00000541377 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 G3BP1Q13283 466 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■■□ 23.6
CLASP1-215ENST00000541377 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
CLASP1-215ENST00000541377 ATP6V1DQ9Y5K8 247 aa10.99□□□□□ -0.65
CLASP1-215ENST00000541377 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
CLASP1-215ENST00000541377 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
CLASP1-215ENST00000541377 DESP17661 470 aa10.99□□□□□ -0.65
CLASP1-215ENST00000541377 CDR1P51861 262 aa10.99□□□□□ -0.65
CLASP1-215ENST00000541377 RALYLQ86SE5 291 aaKnown RBP10.99□□□□□ -0.65
CLASP1-215ENST00000541377 DRC1Q96MC2 740 aa10.99□□□□□ -0.65
CLASP1-215ENST00000541377 RUFY1Q96T51 708 aa10.98□□□□□ -0.65
CLASP1-215ENST00000541377 ZSCAN29Q8IWY8 852 aaPredicted RBP10.98□□□□□ -0.65
CLASP1-215ENST00000541377 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CLASP1-215ENST00000541377 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
CLASP1-215ENST00000541377 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
CLASP1-215ENST00000541377 CA8P35219 290 aa10.98□□□□□ -0.65
CLASP1-215ENST00000541377 DNAI2Q9GZS0 605 aa10.98□□□□□ -0.65
CLASP1-215ENST00000541377 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 NEUROD6Q96NK8 337 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
CLASP1-215ENST00000541377 KRT18P05783 430 aaKnown RBP10.97□□□□□ -0.65
CLASP1-215ENST00000541377 NUP155O75694 1391 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 MIER1Q8N108 512 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 MYO6Q9UM54 1294 aa10.97□□□□□ -0.65
CLASP1-215ENST00000541377 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
CLASP1-215ENST00000541377 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.659e-6■■■■■ 50.1
CLASP1-215ENST00000541377 FOXD4L6Q3SYB3 417 aaPredicted RBP10.97□□□□□ -0.65
CLASP1-215ENST00000541377 FOXD4L3Q6VB84 417 aaPredicted RBP10.97□□□□□ -0.65
CLASP1-215ENST00000541377 RNF20Q5VTR2 975 aa10.96□□□□□ -0.65
CLASP1-215ENST00000541377 NEFHP12036 1026 aa10.96□□□□□ -0.65
CLASP1-215ENST00000541377 GRM1Q13255 1194 aa10.96□□□□□ -0.65
CLASP1-215ENST00000541377 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.65
CLASP1-215ENST00000541377 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.66
CLASP1-215ENST00000541377 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.66
CLASP1-215ENST00000541377 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
CLASP1-215ENST00000541377 GNL3LQ9NVN8 582 aaKnown RBP10.95□□□□□ -0.66
CLASP1-215ENST00000541377 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
CLASP1-215ENST00000541377 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
CLASP1-215ENST00000541377 SART3Q15020 963 aaKnown RBP10.95□□□□□ -0.66
CLASP1-215ENST00000541377 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
CLASP1-215ENST00000541377 WDR78Q5VTH9 848 aa10.94□□□□□ -0.66
CLASP1-215ENST00000541377 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
CLASP1-215ENST00000541377 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
CLASP1-215ENST00000541377 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
CLASP1-215ENST00000541377 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■■□ 22.9
CLASP1-215ENST00000541377 CRBNQ96SW2 442 aa10.94□□□□□ -0.66
CLASP1-215ENST00000541377 EVC2Q86UK5 1308 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 TMOD2Q9NZR1 351 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 ANKRD62A6NC57 917 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 FOSBP53539 338 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 SIN3AQ96ST3 1273 aa10.93□□□□□ -0.66
CLASP1-215ENST00000541377 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
CLASP1-215ENST00000541377 MINK1Q8N4C8 1332 aaPredicted RBP10.92□□□□□ -0.66
CLASP1-215ENST00000541377 GPRASP1Q5JY77 1395 aa10.92□□□□□ -0.66
CLASP1-215ENST00000541377 SEPT7Q16181 437 aaKnown RBP10.92□□□□□ -0.66
CLASP1-215ENST00000541377 ANKRD18AQ8IVF6 992 aa10.92□□□□□ -0.66
CLASP1-215ENST00000541377 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
CLASP1-215ENST00000541377 NUTM2GQ5VZR2 741 aa10.92□□□□□ -0.66
CLASP1-215ENST00000541377 ERC1Q8IUD2 1116 aa10.91□□□□□ -0.66
CLASP1-215ENST00000541377 CHMP5Q9NZZ3 219 aa10.91□□□□□ -0.66
CLASP1-215ENST00000541377 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
CLASP1-215ENST00000541377 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
CLASP1-215ENST00000541377 CNNM1Q9NRU3 951 aa10.91□□□□□ -0.66
CLASP1-215ENST00000541377 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
CLASP1-215ENST00000541377 TXLNAP40222 546 aa10.9□□□□□ -0.66
CLASP1-215ENST00000541377 ARHGAP35Q9NRY4 1499 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms