RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
CCDC6-203ENST00000518638 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
CCDC6-203ENST00000518638 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
CCDC6-203ENST00000518638 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
CCDC6-203ENST00000518638 SMAPO00193 183 aa11.78□□□□□ -0.52
CCDC6-203ENST00000518638 WIZO95785 1651 aa11.78□□□□□ -0.52
CCDC6-203ENST00000518638 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
CCDC6-203ENST00000518638 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
CCDC6-203ENST00000518638 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
CCDC6-203ENST00000518638 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
CCDC6-203ENST00000518638 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
CCDC6-203ENST00000518638 PRSS12P56730 875 aa11.75□□□□□ -0.53
CCDC6-203ENST00000518638 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
CCDC6-203ENST00000518638 GGCXP38435 758 aa11.74□□□□□ -0.53
CCDC6-203ENST00000518638 ZNF775Q96BV0 537 aaPredicted RBP11.74□□□□□ -0.53
CCDC6-203ENST00000518638 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
CCDC6-203ENST00000518638 RNF40O75150 1001 aa11.72□□□□□ -0.53
CCDC6-203ENST00000518638 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CCDC6-203ENST00000518638 TATDN2Q93075 761 aa11.72□□□□□ -0.53
CCDC6-203ENST00000518638 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
CCDC6-203ENST00000518638 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
CCDC6-203ENST00000518638 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
CCDC6-203ENST00000518638 APLP1P51693 650 aa11.7□□□□□ -0.54
CCDC6-203ENST00000518638 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
CCDC6-203ENST00000518638 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
CCDC6-203ENST00000518638 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
CCDC6-203ENST00000518638 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
CCDC6-203ENST00000518638 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
CCDC6-203ENST00000518638 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
CCDC6-203ENST00000518638 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
CCDC6-203ENST00000518638 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
CCDC6-203ENST00000518638 TMUB1Q9BVT8 246 aa11.67□□□□□ -0.54
CCDC6-203ENST00000518638 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
CCDC6-203ENST00000518638 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
CCDC6-203ENST00000518638 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
CCDC6-203ENST00000518638 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
CCDC6-203ENST00000518638 CHD1O14646 1710 aa11.65□□□□□ -0.54
CCDC6-203ENST00000518638 COPS2P61201 443 aa11.64□□□□□ -0.55
CCDC6-203ENST00000518638 NUDT18Q6ZVK8 323 aa11.63□□□□□ -0.55
CCDC6-203ENST00000518638 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CCDC6-203ENST00000518638 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
CCDC6-203ENST00000518638 E2F4Q16254 413 aa11.6□□□□□ -0.55
CCDC6-203ENST00000518638 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
CCDC6-203ENST00000518638 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
CCDC6-203ENST00000518638 PKDCCQ504Y2 493 aa11.59□□□□□ -0.55
CCDC6-203ENST00000518638 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
CCDC6-203ENST00000518638 ZPR1O75312 459 aa11.58□□□□□ -0.56
CCDC6-203ENST00000518638 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.56
CCDC6-203ENST00000518638 DGAT1O75907 488 aa11.57□□□□□ -0.56
CCDC6-203ENST00000518638 SLC19A1P41440 591 aa11.57□□□□□ -0.56
CCDC6-203ENST00000518638 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
CCDC6-203ENST00000518638 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
CCDC6-203ENST00000518638 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
CCDC6-203ENST00000518638 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
CCDC6-203ENST00000518638 MYT1Q01538 1121 aa11.56□□□□□ -0.56
CCDC6-203ENST00000518638 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
CCDC6-203ENST00000518638 PRR14Q9BWN1 585 aa11.55□□□□□ -0.56
CCDC6-203ENST00000518638 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
CCDC6-203ENST00000518638 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
CCDC6-203ENST00000518638 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
CCDC6-203ENST00000518638 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
CCDC6-203ENST00000518638 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
CCDC6-203ENST00000518638 PRR20EP86478 221 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 PRR20CP86479 221 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 PRR20DP86480 221 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 PRR20BP86481 221 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 PRR20AP86496 221 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
CCDC6-203ENST00000518638 PCDHB3Q9Y5E6 796 aa11.52□□□□□ -0.57
CCDC6-203ENST00000518638 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.575e-9■■■■□ 19.6
CCDC6-203ENST00000518638 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
CCDC6-203ENST00000518638 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
CCDC6-203ENST00000518638 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
CCDC6-203ENST00000518638 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
CCDC6-203ENST00000518638 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
CCDC6-203ENST00000518638 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
CCDC6-203ENST00000518638 POTECB2RU33 542 aa11.48□□□□□ -0.57
CCDC6-203ENST00000518638 OSBPP22059 807 aa11.48□□□□□ -0.57
CCDC6-203ENST00000518638 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
CCDC6-203ENST00000518638 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
CCDC6-203ENST00000518638 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
CCDC6-203ENST00000518638 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
CCDC6-203ENST00000518638 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
CCDC6-203ENST00000518638 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
CCDC6-203ENST00000518638 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
CCDC6-203ENST00000518638 ZNF697Q5TEC3 545 aa11.45□□□□□ -0.58
CCDC6-203ENST00000518638 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
CCDC6-203ENST00000518638 TLL1O43897 1013 aa11.43□□□□□ -0.58
CCDC6-203ENST00000518638 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
CCDC6-203ENST00000518638 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
CCDC6-203ENST00000518638 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
CCDC6-203ENST00000518638 TNFRSF10AO00220 468 aa11.41□□□□□ -0.58
CCDC6-203ENST00000518638 LIAT1Q6ZQX7 453 aa11.41□□□□□ -0.58
CCDC6-203ENST00000518638 EYA1Q99502 592 aa11.41□□□□□ -0.58
CCDC6-203ENST00000518638 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
CCDC6-203ENST00000518638 GDF9O60383 454 aa11.4□□□□□ -0.58
CCDC6-203ENST00000518638 S1PR4O95977 384 aa11.4□□□□□ -0.58
CCDC6-203ENST00000518638 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
CCDC6-203ENST00000518638 SOGA1O94964 1423 aa11.4□□□□□ -0.58
CCDC6-203ENST00000518638 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms