RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
LSM6-206ENST00000510331 ALKQ9UM73 1620 aa27.97■■■□□ 2.07
LSM6-206ENST00000510331 NWD1Q149M9 1564 aa27.96■■■□□ 2.07
LSM6-206ENST00000510331 PLEKHG1Q9ULL1 1385 aa27.96■■■□□ 2.07
LSM6-206ENST00000510331 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
LSM6-206ENST00000510331 TRIM52Q96A61 297 aa27.93■■■□□ 2.06
LSM6-206ENST00000510331 SLC26A8Q96RN1 970 aa27.93■■■□□ 2.06
LSM6-206ENST00000510331 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
LSM6-206ENST00000510331 KIF1BO60333 1816 aa27.91■■■□□ 2.06
LSM6-206ENST00000510331 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
LSM6-206ENST00000510331 DIP2AQ14689 1571 aa27.88■■■□□ 2.05
LSM6-206ENST00000510331 BCANQ96GW7 911 aa27.87■■■□□ 2.05
LSM6-206ENST00000510331 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
LSM6-206ENST00000510331 NKTRP30414 1462 aaKnown RBP27.87■■■□□ 2.05
LSM6-206ENST00000510331 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
LSM6-206ENST00000510331 NEXMIFQ5QGS0 1516 aa27.86■■■□□ 2.05
LSM6-206ENST00000510331 ADAMTS13Q76LX8 1427 aa27.85■■■□□ 2.05
LSM6-206ENST00000510331 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
LSM6-206ENST00000510331 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.83■■■□□ 2.05
LSM6-206ENST00000510331 SCAF1Q9H7N4 1312 aaKnown RBP27.82■■■□□ 2.04
LSM6-206ENST00000510331 KCNA6P17658 529 aa27.81■■■□□ 2.04
LSM6-206ENST00000510331 HDGFP51858 240 aaKnown RBP27.81■■■□□ 2.04
LSM6-206ENST00000510331 PIP4K2BP78356 416 aa27.81■■■□□ 2.04
LSM6-206ENST00000510331 SETBP1Q9Y6X0 1596 aa27.81■■■□□ 2.04
LSM6-206ENST00000510331 TOM1O60784 492 aa27.8■■■□□ 2.04
LSM6-206ENST00000510331 TMEM94Q12767 1356 aa27.8■■■□□ 2.04
LSM6-206ENST00000510331 SETD5Q9C0A6 1442 aa27.78■■■□□ 2.04
LSM6-206ENST00000510331 FOXD1Q16676 465 aa27.77■■■□□ 2.04
LSM6-206ENST00000510331 ZNF326Q5BKZ1 582 aaKnown RBP27.77■■■□□ 2.04
LSM6-206ENST00000510331 PPLO60437 1756 aa27.74■■■□□ 2.03
LSM6-206ENST00000510331 RBM33Q96EV2 1170 aaKnown RBP27.73■■■□□ 2.03
LSM6-206ENST00000510331 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
LSM6-206ENST00000510331 XRN1Q8IZH2 1706 aaKnown RBP27.72■■■□□ 2.03
LSM6-206ENST00000510331 TBX22Q9Y458 520 aa27.72■■■□□ 2.03
LSM6-206ENST00000510331 PROSER2Q86WR7 435 aaPredicted RBP27.7■■■□□ 2.02
LSM6-206ENST00000510331 MPHOSPH9Q99550 1183 aa27.7■■■□□ 2.02
LSM6-206ENST00000510331 SETD1AO15047 1707 aaKnown RBP27.7■■■□□ 2.02
LSM6-206ENST00000510331 PTPRUQ92729 1446 aa27.69■■■□□ 2.02
LSM6-206ENST00000510331 PIK3R4Q99570 1358 aa27.69■■■□□ 2.02
LSM6-206ENST00000510331 CCDC144AA2RUR9 1427 aa27.68■■■□□ 2.02
LSM6-206ENST00000510331 HSPA1LP34931 641 aa27.68■■■□□ 2.02
LSM6-206ENST00000510331 IFT172Q9UG01 1749 aa27.66■■■□□ 2.02
LSM6-206ENST00000510331 ROBO1Q9Y6N7 1651 aa27.63■■■□□ 2.01
LSM6-206ENST00000510331 METP08581 1390 aa27.62■■■□□ 2.01
LSM6-206ENST00000510331 MSH6P52701 1360 aa27.61■■■□□ 2.01
LSM6-206ENST00000510331 SPATA31E1Q6ZUB1 1445 aa27.61■■■□□ 2.01
LSM6-206ENST00000510331 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.59■■■□□ 2.01
LSM6-206ENST00000510331 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
LSM6-206ENST00000510331 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
LSM6-206ENST00000510331 DISP3Q9P2K9 1392 aa27.56■■■□□ 2
LSM6-206ENST00000510331 NCOA3Q9Y6Q9 1424 aa27.56■■■□□ 2
LSM6-206ENST00000510331 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
LSM6-206ENST00000510331 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
LSM6-206ENST00000510331 NALCNQ8IZF0 1738 aa27.53■■■□□ 2
LSM6-206ENST00000510331 FAM135BQ49AJ0 1406 aa27.53■■■□□ 2
LSM6-206ENST00000510331 VGFO15240 615 aaPredicted RBP27.51■■□□□ 1.99
LSM6-206ENST00000510331 C14orf37Q86TY3 774 aa27.51■■□□□ 1.99
LSM6-206ENST00000510331 RGL3Q3MIN7 710 aa27.48■■□□□ 1.99
LSM6-206ENST00000510331 PTCH1Q13635 1447 aa27.47■■□□□ 1.99
LSM6-206ENST00000510331 ADGRF5Q8IZF2 1346 aa27.46■■□□□ 1.99
LSM6-206ENST00000510331 ASXL1Q8IXJ9 1541 aa27.46■■□□□ 1.99
LSM6-206ENST00000510331 PHLPP1O60346 1717 aa27.45■■□□□ 1.99
LSM6-206ENST00000510331 ANKRD30BQ9BXX2 1392 aa27.45■■□□□ 1.98
LSM6-206ENST00000510331 PIK3C2GO75747 1445 aa27.44■■□□□ 1.98
LSM6-206ENST00000510331 DCCP43146 1447 aa27.44■■□□□ 1.98
LSM6-206ENST00000510331 PRAG1Q86YV5 1406 aa27.44■■□□□ 1.98
LSM6-206ENST00000510331 ADGRL3Q9HAR2 1447 aa27.43■■□□□ 1.98
LSM6-206ENST00000510331 SLAIN2Q9P270 581 aa27.43■■□□□ 1.98
LSM6-206ENST00000510331 MYOM2P54296 1465 aa27.41■■□□□ 1.98
LSM6-206ENST00000510331 ROBO2Q9HCK4 1378 aa27.41■■□□□ 1.98
LSM6-206ENST00000510331 C19orf44Q9H6X5 657 aa27.41■■□□□ 1.98
LSM6-206ENST00000510331 COL16A1Q07092 1604 aaPredicted RBP27.4■■□□□ 1.98
LSM6-206ENST00000510331 KNDC1Q76NI1 1749 aa27.39■■□□□ 1.98
LSM6-206ENST00000510331 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
LSM6-206ENST00000510331 ATF3P18847 181 aa27.38■■□□□ 1.97
LSM6-206ENST00000510331 CADPS2Q86UW7 1296 aa27.38■■□□□ 1.97
LSM6-206ENST00000510331 LAMC1P11047 1609 aa27.38■■□□□ 1.97
LSM6-206ENST00000510331 HRCP23327 699 aa27.37■■□□□ 1.97
LSM6-206ENST00000510331 MST1RQ04912 1400 aa27.37■■□□□ 1.97
LSM6-206ENST00000510331 AHDC1Q5TGY3 1603 aaPredicted RBP27.37■■□□□ 1.97
LSM6-206ENST00000510331 ILDR2Q71H61 639 aa27.32■■□□□ 1.96
LSM6-206ENST00000510331 TECPR2O15040 1411 aa27.31■■□□□ 1.96
LSM6-206ENST00000510331 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
LSM6-206ENST00000510331 CDC42BPGQ6DT37 1551 aa27.29■■□□□ 1.96
LSM6-206ENST00000510331 LRPPRCP42704 1394 aaKnown RBP27.28■■□□□ 1.96
LSM6-206ENST00000510331 BRINP3Q76B58 766 aa27.27■■□□□ 1.96
LSM6-206ENST00000510331 YTHDC2Q9H6S0 1430 aaKnown RBP27.25■■□□□ 1.95
LSM6-206ENST00000510331 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
LSM6-206ENST00000510331 STK26Q9P289 416 aa27.24■■□□□ 1.95
LSM6-206ENST00000510331 SHPRHQ149N8 1683 aa27.24■■□□□ 1.95
LSM6-206ENST00000510331 C1orf167Q5SNV9 1468 aa27.23■■□□□ 1.95
LSM6-206ENST00000510331 PLEKHH1Q9ULM0 1364 aa27.22■■□□□ 1.95
LSM6-206ENST00000510331 ADGRB1O14514 1584 aa27.21■■□□□ 1.95
LSM6-206ENST00000510331 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
LSM6-206ENST00000510331 JCADQ9P266 1359 aa27.21■■□□□ 1.95
LSM6-206ENST00000510331 C14orf93Q9H972 538 aaKnown RBP27.2■■□□□ 1.94
LSM6-206ENST00000510331 CFAP70Q5T0N1 1121 aa27.19■■□□□ 1.94
LSM6-206ENST00000510331 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
LSM6-206ENST00000510331 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
LSM6-206ENST00000510331 FMN2Q9NZ56 1722 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms