RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PRSS12P56730 875 aa10.9□□□□□ -0.66
SMARCAL1-212ENST00000486983 MTRQ99707 1265 aa10.9□□□□□ -0.66
SMARCAL1-212ENST00000486983 PRKD2Q9BZL6 878 aa10.9□□□□□ -0.66
SMARCAL1-212ENST00000486983 RAPGEF2Q9Y4G8 1499 aa10.89□□□□□ -0.67
SMARCAL1-212ENST00000486983 UBTFP17480 764 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-212ENST00000486983 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
SMARCAL1-212ENST00000486983 CLIP1P30622 1438 aa10.89□□□□□ -0.67
SMARCAL1-212ENST00000486983 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
SMARCAL1-212ENST00000486983 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
SMARCAL1-212ENST00000486983 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
SMARCAL1-212ENST00000486983 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
SMARCAL1-212ENST00000486983 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-212ENST00000486983 NBPF26B4DH59 902 aa10.85□□□□□ -0.67
SMARCAL1-212ENST00000486983 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-212ENST00000486983 TATDN2Q93075 761 aa10.85□□□□□ -0.67
SMARCAL1-212ENST00000486983 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
SMARCAL1-212ENST00000486983 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
SMARCAL1-212ENST00000486983 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
SMARCAL1-212ENST00000486983 RNF40O75150 1001 aa10.82□□□□□ -0.68
SMARCAL1-212ENST00000486983 APLP1P51693 650 aa10.82□□□□□ -0.68
SMARCAL1-212ENST00000486983 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
SMARCAL1-212ENST00000486983 V9GY48 417 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-212ENST00000486983 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
SMARCAL1-212ENST00000486983 GRXCR2A6NFK2 248 aa10.8□□□□□ -0.68
SMARCAL1-212ENST00000486983 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
SMARCAL1-212ENST00000486983 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
SMARCAL1-212ENST00000486983 NESP48681 1621 aa10.8□□□□□ -0.68
SMARCAL1-212ENST00000486983 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
SMARCAL1-212ENST00000486983 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
SMARCAL1-212ENST00000486983 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
SMARCAL1-212ENST00000486983 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
SMARCAL1-212ENST00000486983 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.68
SMARCAL1-212ENST00000486983 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
SMARCAL1-212ENST00000486983 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
SMARCAL1-212ENST00000486983 OSBPP22059 807 aa10.76□□□□□ -0.69
SMARCAL1-212ENST00000486983 E2F4Q16254 413 aa10.76□□□□□ -0.69
SMARCAL1-212ENST00000486983 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-212ENST00000486983 CUX2O14529 1486 aa10.75□□□□□ -0.69
SMARCAL1-212ENST00000486983 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-212ENST00000486983 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-212ENST00000486983 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
SMARCAL1-212ENST00000486983 COPS2P61201 443 aa10.73□□□□□ -0.69
SMARCAL1-212ENST00000486983 IGF1RP08069 1367 aa10.73□□□□□ -0.69
SMARCAL1-212ENST00000486983 ABCA10Q8WWZ4 1543 aa10.73□□□□□ -0.69
SMARCAL1-212ENST00000486983 HDGFP51858 240 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-212ENST00000486983 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-212ENST00000486983 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
SMARCAL1-212ENST00000486983 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
SMARCAL1-212ENST00000486983 TOPBP1Q92547 1522 aa10.71□□□□□ -0.69
SMARCAL1-212ENST00000486983 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 GGCXP38435 758 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 CUL7Q14999 1698 aa10.68□□□□□ -0.7
SMARCAL1-212ENST00000486983 CARMIL1Q5VZK9 1371 aa10.67□□□□□ -0.7
SMARCAL1-212ENST00000486983 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
SMARCAL1-212ENST00000486983 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
SMARCAL1-212ENST00000486983 CCER1Q8TC90 406 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-212ENST00000486983 PDS5BQ9NTI5 1447 aa10.66□□□□□ -0.7
SMARCAL1-212ENST00000486983 ZPR1O75312 459 aa10.65□□□□□ -0.7
SMARCAL1-212ENST00000486983 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
SMARCAL1-212ENST00000486983 TRIM67Q6ZTA4 783 aa10.64□□□□□ -0.71
SMARCAL1-212ENST00000486983 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
SMARCAL1-212ENST00000486983 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-212ENST00000486983 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-212ENST00000486983 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
SMARCAL1-212ENST00000486983 EYA1Q99502 592 aa10.62□□□□□ -0.71
SMARCAL1-212ENST00000486983 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
SMARCAL1-212ENST00000486983 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
SMARCAL1-212ENST00000486983 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
SMARCAL1-212ENST00000486983 ZNF775Q96BV0 537 aaPredicted RBP10.61□□□□□ -0.71
SMARCAL1-212ENST00000486983 PCDHB3Q9Y5E6 796 aa10.61□□□□□ -0.71
SMARCAL1-212ENST00000486983 FHAD1B1AJZ9 1412 aa10.6□□□□□ -0.71
SMARCAL1-212ENST00000486983 TLL1O43897 1013 aa10.6□□□□□ -0.71
SMARCAL1-212ENST00000486983 BLOC1S3Q6QNY0 202 aa10.6□□□□□ -0.71
SMARCAL1-212ENST00000486983 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
SMARCAL1-212ENST00000486983 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
SMARCAL1-212ENST00000486983 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
SMARCAL1-212ENST00000486983 THOC2Q8NI27 1593 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 AQRO60306 1485 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 SLC19A1P41440 591 aa10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 PRR14Q9BWN1 585 aa10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-212ENST00000486983 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
SMARCAL1-212ENST00000486983 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
SMARCAL1-212ENST00000486983 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-212ENST00000486983 CLSPNQ9HAW4 1339 aa10.56□□□□□ -0.72
SMARCAL1-212ENST00000486983 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
SMARCAL1-212ENST00000486983 PKDCCQ504Y2 493 aa10.54□□□□□ -0.72
SMARCAL1-212ENST00000486983 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
SMARCAL1-212ENST00000486983 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-212ENST00000486983 GAPVD1Q14C86 1478 aa10.54□□□□□ -0.72
SMARCAL1-212ENST00000486983 MYT1Q01538 1121 aa10.53□□□□□ -0.72
SMARCAL1-212ENST00000486983 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.72
SMARCAL1-212ENST00000486983 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms