RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 TMEM51Q9NW97 253 aa9.24□□□□□ -0.93
BDNF-207ENST00000395986 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
BDNF-207ENST00000395986 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
BDNF-207ENST00000395986 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
BDNF-207ENST00000395986 CCDC173Q0VFZ6 552 aa9.24□□□□□ -0.93
BDNF-207ENST00000395986 TBC1D32Q96NH3 1257 aa9.23□□□□□ -0.93
BDNF-207ENST00000395986 IGF1RP08069 1367 aa9.23□□□□□ -0.93
BDNF-207ENST00000395986 MAGI1Q96QZ7 1491 aaPredicted RBP9.23□□□□□ -0.93
BDNF-207ENST00000395986 FMN1Q68DA7 1419 aa9.23□□□□□ -0.93
BDNF-207ENST00000395986 ATP2B3Q16720 1220 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 GBP4Q96PP9 640 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
BDNF-207ENST00000395986 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 SSFA2P28290 1259 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 KCNJ4P48050 445 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 GOLGA2Q08379 1002 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 MCTP1Q6DN14 999 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 CCDC94Q9BW85 323 aaPredicted RBP9.22□□□□□ -0.93
BDNF-207ENST00000395986 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
BDNF-207ENST00000395986 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
BDNF-207ENST00000395986 ERICH4A6NGS2 130 aa9.21□□□□□ -0.94
BDNF-207ENST00000395986 RALBP1Q15311 655 aa9.21□□□□□ -0.94
BDNF-207ENST00000395986 IPO4Q8TEX9 1081 aaKnown RBP9.21□□□□□ -0.94
BDNF-207ENST00000395986 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
BDNF-207ENST00000395986 KIF15Q9NS87 1388 aa9.21□□□□□ -0.94
BDNF-207ENST00000395986 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
BDNF-207ENST00000395986 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
BDNF-207ENST00000395986 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
BDNF-207ENST00000395986 NAIPQ13075 1403 aa9.2□□□□□ -0.94
BDNF-207ENST00000395986 APAF1O14727 1248 aa9.2□□□□□ -0.94
BDNF-207ENST00000395986 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
BDNF-207ENST00000395986 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
BDNF-207ENST00000395986 RRP7AQ9Y3A4 280 aaKnown RBP9.2□□□□□ -0.94
BDNF-207ENST00000395986 GOLGA6L22H0YM25 854 aa9.19□□□□□ -0.94
BDNF-207ENST00000395986 CEP170Q5SW79 1584 aa9.19□□□□□ -0.94
BDNF-207ENST00000395986 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
BDNF-207ENST00000395986 TIAM1Q13009 1591 aa9.18□□□□□ -0.94
BDNF-207ENST00000395986 RBSNQ9H1K0 784 aa9.18□□□□□ -0.94
BDNF-207ENST00000395986 BRD4O60885 1362 aaPredicted RBP9.18□□□□□ -0.94
BDNF-207ENST00000395986 DYNC1I1O14576 645 aa9.18□□□□□ -0.94
BDNF-207ENST00000395986 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
BDNF-207ENST00000395986 GRIN2AQ12879 1464 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 KDM5BQ9UGL1 1544 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
BDNF-207ENST00000395986 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 CHMP7Q8WUX9 453 aaPredicted RBP9.17□□□□□ -0.94
BDNF-207ENST00000395986 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 MAPK8IP3Q9UPT6 1336 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 CUL7Q14999 1698 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 SASS6Q6UVJ0 657 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 LRPPRCP42704 1394 aaKnown RBP9.17□□□□□ -0.94
BDNF-207ENST00000395986 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
BDNF-207ENST00000395986 DMRT2Q9Y5R5 561 aa9.16□□□□□ -0.94
BDNF-207ENST00000395986 SYCE3A1L190 88 aa9.16□□□□□ -0.94
BDNF-207ENST00000395986 PRPF40AO75400 957 aaKnown RBP9.16□□□□□ -0.94
BDNF-207ENST00000395986 HFM1A2PYH4 1435 aa9.16□□□□□ -0.94
BDNF-207ENST00000395986 PLEKHH1Q9ULM0 1364 aa9.15□□□□□ -0.94
BDNF-207ENST00000395986 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
BDNF-207ENST00000395986 NUP160Q12769 1436 aa9.15□□□□□ -0.94
BDNF-207ENST00000395986 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.95
BDNF-207ENST00000395986 TTC12Q9H892 705 aaPredicted RBP9.14□□□□□ -0.95
BDNF-207ENST00000395986 ZKSCAN5Q9Y2L8 839 aa9.14□□□□□ -0.95
BDNF-207ENST00000395986 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
BDNF-207ENST00000395986 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
BDNF-207ENST00000395986 NOL7Q9UMY1 257 aaKnown RBP9.14□□□□□ -0.95
BDNF-207ENST00000395986 PKD2Q13563 968 aa9.14□□□□□ -0.95
BDNF-207ENST00000395986 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
BDNF-207ENST00000395986 NOL8Q76FK4 1167 aaKnown RBP9.13□□□□□ -0.95
BDNF-207ENST00000395986 PPP1R9BQ96SB3 815 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 RLBP1P12271 317 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 UTP14CQ5TAP6 766 aaKnown RBP9.13□□□□□ -0.95
BDNF-207ENST00000395986 PKP1Q13835 747 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 OSCARQ8IYS5 282 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 LNPKQ9C0E8 428 aa9.13□□□□□ -0.95
BDNF-207ENST00000395986 ERCC6L2Q5T890 1561 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 LETM1O95202 739 aaPredicted RBP9.12□□□□□ -0.95
BDNF-207ENST00000395986 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 SKOR2Q2VWA4 1001 aaPredicted RBP9.12□□□□□ -0.95
BDNF-207ENST00000395986 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 NPHP1O15259 732 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 KIF20AO95235 890 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
BDNF-207ENST00000395986 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
BDNF-207ENST00000395986 ZNF644Q9H582 1327 aaPredicted RBP9.11□□□□□ -0.95
BDNF-207ENST00000395986 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
BDNF-207ENST00000395986 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
BDNF-207ENST00000395986 KIF3AQ9Y496 699 aa9.11□□□□□ -0.95
BDNF-207ENST00000395986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
BDNF-207ENST00000395986 BAG4O95429 457 aaKnown RBP9.11□□□□□ -0.95
BDNF-207ENST00000395986 SPATA31E1Q6ZUB1 1445 aa9.11□□□□□ -0.95
BDNF-207ENST00000395986 GTPBP4Q9BZE4 634 aaKnown RBP9.11□□□□□ -0.95
BDNF-207ENST00000395986 NBPF1Q3BBV0 1214 aa9.1□□□□□ -0.95
BDNF-207ENST00000395986 BCL2L12Q9HB09 334 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms