RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Zc3h13E9Q784 1729 aaKnown RBP32.02■■■□□ 2.72
Fn1-208ENSMUST00000186940 Eif2ak4Q9QZ05 1648 aa32.02■■■□□ 2.72
Fn1-208ENSMUST00000186940 Bcl11bQ99PV8 884 aa32.02■■■□□ 2.72
Fn1-208ENSMUST00000186940 PalldQ9ET54 1408 aa32.01■■■□□ 2.71
Fn1-208ENSMUST00000186940 Mphosph9A6H5Y1 991 aa32■■■□□ 2.71
Fn1-208ENSMUST00000186940 Prdm2A2A7B5 1709 aaKnown RBP31.99■■■□□ 2.71
Fn1-208ENSMUST00000186940 Edc4Q3UJB9 1406 aaKnown RBP31.99■■■□□ 2.71
Fn1-208ENSMUST00000186940 Myo3aQ8K3H5 1613 aa31.98■■■□□ 2.71
Fn1-208ENSMUST00000186940 Ehmt2Q9Z148 1263 aaKnown RBP31.97■■■□□ 2.71
Fn1-208ENSMUST00000186940 Hdac5Q9Z2V6 1113 aa31.96■■■□□ 2.71
Fn1-208ENSMUST00000186940 Sall3Q62255 1320 aa31.96■■■□□ 2.71
Fn1-208ENSMUST00000186940 Mroh1E0CZ22 1640 aa31.94■■■□□ 2.7
Fn1-208ENSMUST00000186940 PplQ9R269 1755 aa31.94■■■□□ 2.7
Fn1-208ENSMUST00000186940 IghaA0A0A6YXW6 389 aa31.93■■■□□ 2.7
Fn1-208ENSMUST00000186940 Pik3c2gO70167 1506 aa31.9■■■□□ 2.7
Fn1-208ENSMUST00000186940 AatkQ80YE4 1365 aa31.9■■■□□ 2.7
Fn1-208ENSMUST00000186940 Setd1aE9PYH6 1716 aa31.89■■■□□ 2.7
Fn1-208ENSMUST00000186940 Abca8aQ8K442 1620 aa31.89■■■□□ 2.7
Fn1-208ENSMUST00000186940 Ccer2J3QPU5 274 aa31.83■■■□□ 2.69
Fn1-208ENSMUST00000186940 Atp1b4Q99ME6 356 aa31.83■■■□□ 2.69
Fn1-208ENSMUST00000186940 Dhx9O70133 1380 aaKnown RBP31.83■■■□□ 2.69
Fn1-208ENSMUST00000186940 Rprd2Q6NXI6 1469 aaKnown RBP31.83■■■□□ 2.69
Fn1-208ENSMUST00000186940 Ehbp1l1Q99MS7 1716 aa31.82■■■□□ 2.68
Fn1-208ENSMUST00000186940 Asxl2Q8BZ32 1370 aa31.81■■■□□ 2.68
Fn1-208ENSMUST00000186940 Thsd7aQ69ZU6 1645 aa31.81■■■□□ 2.68
Fn1-208ENSMUST00000186940 Arhgef28P97433 1693 aa31.79■■■□□ 2.68
Fn1-208ENSMUST00000186940 Amigo3Q8C2S7 508 aa31.79■■■□□ 2.68
Fn1-208ENSMUST00000186940 Slit3Q9WVB4 1523 aa31.79■■■□□ 2.68
Fn1-208ENSMUST00000186940 Pkd2O35245 966 aa31.78■■■□□ 2.68
Fn1-208ENSMUST00000186940 Ankrd36D3Z4K0 1415 aa31.77■■■□□ 2.68
Fn1-208ENSMUST00000186940 Mbd5B1AYB6 1498 aa31.74■■■□□ 2.67
Fn1-208ENSMUST00000186940 AU022751B1B0V2 589 aa31.73■■■□□ 2.67
Fn1-208ENSMUST00000186940 Kif21bQ9QXL1 1668 aa31.73■■■□□ 2.67
Fn1-208ENSMUST00000186940 Tns3Q5SSZ5 1440 aa31.73■■■□□ 2.67
Fn1-208ENSMUST00000186940 Cdk13Q69ZA1 1511 aaKnown RBP31.72■■■□□ 2.67
Fn1-208ENSMUST00000186940 Mroh3A0A1D5RM54 893 aa31.7■■■□□ 2.67
Fn1-208ENSMUST00000186940 Q9D9H8 365 aa31.7■■■□□ 2.67
Fn1-208ENSMUST00000186940 Brinp3Q499E0 766 aa31.68■■■□□ 2.66
Fn1-208ENSMUST00000186940 Col18a1P39061 1774 aa31.68■■■□□ 2.66
Fn1-208ENSMUST00000186940 Pik3r4Q8VD65 1358 aa31.67■■■□□ 2.66
Fn1-208ENSMUST00000186940 Tom1O88746 492 aa31.67■■■□□ 2.66
Fn1-208ENSMUST00000186940 Shq1Q7TMX5 569 aa31.67■■■□□ 2.66
Fn1-208ENSMUST00000186940 Slain2Q8CI08 581 aa31.66■■■□□ 2.66
Fn1-208ENSMUST00000186940 Ppip5k1A2ARP1 1436 aa31.65■■■□□ 2.66
Fn1-208ENSMUST00000186940 Evi5lH3BKQ3 813 aa31.65■■■□□ 2.66
Fn1-208ENSMUST00000186940 DnmbpQ6TXD4 1580 aa31.65■■■□□ 2.66
Fn1-208ENSMUST00000186940 Dot1lQ6XZL8 1540 aa31.6■■■□□ 2.65
Fn1-208ENSMUST00000186940 Gimap5Q8BWF2 308 aa31.58■■■□□ 2.65
Fn1-208ENSMUST00000186940 GapdhsQ64467 440 aa31.56■■■□□ 2.64
Fn1-208ENSMUST00000186940 Plxnc1Q9QZC2 1574 aa31.56■■■□□ 2.64
Fn1-208ENSMUST00000186940 HnrnpmQ9D0E1 729 aaKnown RBP31.55■■■□□ 2.64
Fn1-208ENSMUST00000186940 Arap3Q8R5G7 1538 aa31.55■■■□□ 2.64
Fn1-208ENSMUST00000186940 Myom1Q62234 1667 aaKnown RBP31.54■■■□□ 2.64
Fn1-208ENSMUST00000186940 Washc2Q6PGL7 1334 aa31.53■■■□□ 2.64
Fn1-208ENSMUST00000186940 Tmem94Q7TSH8 1360 aa31.5■■■□□ 2.63
Fn1-208ENSMUST00000186940 Rock1P70335 1354 aa31.49■■■□□ 2.63
Fn1-208ENSMUST00000186940 Atf3Q60765 181 aa31.47■■■□□ 2.63
Fn1-208ENSMUST00000186940 Slc52a2Q9D8F3 450 aa31.44■■■□□ 2.62
Fn1-208ENSMUST00000186940 Rims1Q99NE5 1463 aa31.44■■■□□ 2.62
Fn1-208ENSMUST00000186940 Unc13bQ9Z1N9 1602 aa31.43■■■□□ 2.62
Fn1-208ENSMUST00000186940 Ttll13A4Q9F6 804 aa31.41■■■□□ 2.62
Fn1-208ENSMUST00000186940 Nwd1A6H603 1563 aa31.4■■■□□ 2.62
Fn1-208ENSMUST00000186940 MaddQ80U28 1577 aa31.36■■■□□ 2.61
Fn1-208ENSMUST00000186940 Dapk1Q80YE7 1442 aa31.36■■■□□ 2.61
Fn1-208ENSMUST00000186940 Pik3c2aQ61194 1686 aa31.36■■■□□ 2.61
Fn1-208ENSMUST00000186940 Tulp4Q9JIL5 1547 aa31.35■■■□□ 2.61
Fn1-208ENSMUST00000186940 Rgl3Q3UYI5 709 aa31.35■■■□□ 2.61
Fn1-208ENSMUST00000186940 Mier1Q5UAK0 511 aa31.35■■■□□ 2.61
Fn1-208ENSMUST00000186940 Utp14aQ640M1 767 aaKnown RBP31.35■■■□□ 2.61
Fn1-208ENSMUST00000186940 Slc5a4bQ91ZP4 660 aa31.35■■■□□ 2.61
Fn1-208ENSMUST00000186940 Srpk2O54781 681 aaKnown RBP31.34■■■□□ 2.61
Fn1-208ENSMUST00000186940 Kdm2aP59997 1161 aa31.34■■■□□ 2.61
Fn1-208ENSMUST00000186940 Col14a1Q80X19 1797 aa31.34■■■□□ 2.61
Fn1-208ENSMUST00000186940 Cps1Q8C196 1500 aa31.34■■■□□ 2.61
Fn1-208ENSMUST00000186940 Os9Q8K2C7 672 aa31.33■■■□□ 2.61
Fn1-208ENSMUST00000186940 Usp47Q8BY87 1376 aa31.32■■■□□ 2.6
Fn1-208ENSMUST00000186940 Ifit1bl1D3Z6F0 470 aa31.32■■■□□ 2.6
Fn1-208ENSMUST00000186940 Stk26Q99JT2 416 aa31.32■■■□□ 2.6
Fn1-208ENSMUST00000186940 Fbln2P37889 1221 aa31.3■■■□□ 2.6
Fn1-208ENSMUST00000186940 Nyap1Q6PFX7 833 aa31.3■■■□□ 2.6
Fn1-208ENSMUST00000186940 Qtrt2B8ZXI1 415 aa31.29■■■□□ 2.6
Fn1-208ENSMUST00000186940 Fan1Q69ZT1 1020 aa31.29■■■□□ 2.6
Fn1-208ENSMUST00000186940 Eid3Q3V124 375 aa31.28■■■□□ 2.6
Fn1-208ENSMUST00000186940 Adamts13Q769J6 1426 aa31.27■■■□□ 2.6
Fn1-208ENSMUST00000186940 Ift172Q6VH22 1749 aa31.27■■■□□ 2.6
Fn1-208ENSMUST00000186940 Gm10563F6WIE4 79 aa31.22■■■□□ 2.59
Fn1-208ENSMUST00000186940 Puf60Q3UEB3 564 aaKnown RBP31.22■■■□□ 2.59
Fn1-208ENSMUST00000186940 Q3UJC8 639 aa31.22■■■□□ 2.59
Fn1-208ENSMUST00000186940 Gm20521D3Z5F7 333 aa31.21■■■□□ 2.59
Fn1-208ENSMUST00000186940 NalcnQ8BXR5 1738 aa31.21■■■□□ 2.59
Fn1-208ENSMUST00000186940 KdrP35918 1367 aa31.19■■■□□ 2.58
Fn1-208ENSMUST00000186940 C3P01027 1663 aa31.16■■■□□ 2.58
Fn1-208ENSMUST00000186940 Cep152A2AUM9 1736 aaKnown RBP31.16■■■□□ 2.58
Fn1-208ENSMUST00000186940 Itsn2Q9Z0R6 1659 aa31.14■■■□□ 2.58
Fn1-208ENSMUST00000186940 Grwd1Q810D6 446 aaKnown RBP31.14■■■□□ 2.58
Fn1-208ENSMUST00000186940 Lrrc7Q80TE7 1490 aa31.13■■■□□ 2.57
Fn1-208ENSMUST00000186940 Rreb1Q3UH06 1700 aaKnown RBP31.12■■■□□ 2.57
Fn1-208ENSMUST00000186940 Kif20bQ80WE4 1774 aaKnown RBP31.12■■■□□ 2.57
Fn1-208ENSMUST00000186940 Hspa5P20029 655 aaKnown RBP31.11■■■□□ 2.57
Fn1-208ENSMUST00000186940 Plekhg1F6S200 1446 aa31.1■■■□□ 2.57
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms