RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Gm35339A0A140LHH9 1649 aa49,38■■■■■ 5,5
Fn1-208ENSMUST00000186940 NischQ80TM9 1593 aa48,75■■■■■ 5,39
Fn1-208ENSMUST00000186940 Abcc8B2RUS7 1588 aa47,19■■■■■ 5,14
Fn1-208ENSMUST00000186940 Abcc9P70170 1546 aa47,12■■■■■ 5,13
Fn1-208ENSMUST00000186940 ScribQ80U72 1612 aa45,56■■■■■ 4,88
Fn1-208ENSMUST00000186940 NacadQ5SWP3 1504 aa44,21■■■■■ 4,67
Fn1-208ENSMUST00000186940 Kdm5dQ62240 1548 aa44,06■■■■■ 4,64
Fn1-208ENSMUST00000186940 Dcaf1Q80TR8 1506 aa43,37■■■■■ 4,53
Fn1-208ENSMUST00000186940 Sycp2Q9CUU3 1500 aa43,33■■■■■ 4,53
Fn1-208ENSMUST00000186940 BicraF8VPZ9 1578 aa42,71■■■■■ 4,43
Fn1-208ENSMUST00000186940 Rb1cc1Q9ESK9 1588 aa42,44■■■■■ 4,38
Fn1-208ENSMUST00000186940 Rhox8Q6VSS7 320 aa42,05■■■■■ 4,32
Fn1-208ENSMUST00000186940 Dnajc5bQ9CQ94 199 aa41,93■■■■■ 4,3
Fn1-208ENSMUST00000186940 Baz1aO88379 1555 aa41,85■■■■■ 4,29
Fn1-208ENSMUST00000186940 Crybg2B7ZCC2 1516 aa41,77■■■■■ 4,28
Fn1-208ENSMUST00000186940 Ccdc180J3QNE4 1664 aa41,72■■■■■ 4,27
Fn1-208ENSMUST00000186940 Pds5bQ4VA53 1446 aaKnown RBP41,69■■■■■ 4,26
Fn1-208ENSMUST00000186940 Zcchc6Q5BLK4 1491 aaKnown RBP41,34■■■■■ 4,21
Fn1-208ENSMUST00000186940 Thoc2B1AZI6 1594 aaKnown RBP41,29■■■■■ 4,2
Fn1-208ENSMUST00000186940 Atad2bE9Q166 1460 aaKnown RBP41,22■■■■■ 4,19
Fn1-208ENSMUST00000186940 Ercc6F8VPZ5 1481 aa40,78■■■■■ 4,12
Fn1-208ENSMUST00000186940 Smarca4Q3TKT4 1613 aaKnown RBP40,74■■■■■ 4,11
Fn1-208ENSMUST00000186940 Smarca2Q6DIC0 1577 aa40,69■■■■■ 4,1
Fn1-208ENSMUST00000186940 Cc2d2aQ8CFW7 1633 aa40,65■■■■■ 4,1
Fn1-208ENSMUST00000186940 Cecr2E9Q2Z1 1453 aa40,58■■■■■ 4,09
Fn1-208ENSMUST00000186940 Iqgap2Q3UQ44 1575 aa40,55■■■■■ 4,08
Fn1-208ENSMUST00000186940 Fam135aQ6NS59 1506 aa40,35■■■■■ 4,05
Fn1-208ENSMUST00000186940 Wdr62Q3U3T8 1523 aa40,24■■■■■ 4,03
Fn1-208ENSMUST00000186940 Frmpd1A2AKB4 1549 aa40,21■■■■■ 4,03
Fn1-208ENSMUST00000186940 Phldb1Q6PDH0 1371 aaKnown RBP40,12■■■■■ 4,01
Fn1-208ENSMUST00000186940 Baz1bQ9Z277 1479 aa39,96■■■■□ 3,99
Fn1-208ENSMUST00000186940 Ubl4bQ9CQ84 188 aa39,8■■■■□ 3,96
Fn1-208ENSMUST00000186940 CftrP26361 1476 aa39,65■■■■□ 3,94
Fn1-208ENSMUST00000186940 Rtl1Q7M732 1744 aa39,64■■■■□ 3,94
Fn1-208ENSMUST00000186940 Cttnbp2B9EJA2 1648 aa39,55■■■■□ 3,92
Fn1-208ENSMUST00000186940 Brd4Q9ESU6 1400 aaKnown RBP39,54■■■■□ 3,92
Fn1-208ENSMUST00000186940 Unc13aQ4KUS2 1712 aa39,48■■■■□ 3,91
Fn1-208ENSMUST00000186940 Synj1Q8CHC4 1574 aa39,48■■■■□ 3,91
Fn1-208ENSMUST00000186940 Mrc2Q64449 1479 aa39,46■■■■□ 3,91
Fn1-208ENSMUST00000186940 Ccdc136Q3TVA9 1136 aa39,38■■■■□ 3,89
Fn1-208ENSMUST00000186940 Esf1Q3V1V3 845 aaKnown RBP39,06■■■■□ 3,84
Fn1-208ENSMUST00000186940 Rsf1E9PWW9 1441 aaKnown RBP38,84■■■■□ 3,81
Fn1-208ENSMUST00000186940 Trim41Q5NCC3 630 aa38,82■■■■□ 3,8
Fn1-208ENSMUST00000186940 Cux2P70298 1426 aa38,79■■■■□ 3,8
Fn1-208ENSMUST00000186940 Kif15Q6P9L6 1387 aa38,78■■■■□ 3,8
Fn1-208ENSMUST00000186940 Lrriq1Q0P5X1 1673 aa38,52■■■■□ 3,76
Fn1-208ENSMUST00000186940 Lamc3Q9R0B6 1581 aa38,51■■■■□ 3,76
Fn1-208ENSMUST00000186940 Npm1Q61937 292 aaKnown RBP38,44■■■■□ 3,74
Fn1-208ENSMUST00000186940 Kif21aQ9QXL2 1672 aa38,4■■■■□ 3,74
Fn1-208ENSMUST00000186940 Cep164Q5DU05 1446 aa38,25■■■■□ 3,71
Fn1-208ENSMUST00000186940 Dnajc5P60904 198 aa38,22■■■■□ 3,71
Fn1-208ENSMUST00000186940 Golga3P55937 1487 aa38,03■■■■□ 3,68
Fn1-208ENSMUST00000186940 Ccdc18Q640L5 1455 aa38,03■■■■□ 3,68
Fn1-208ENSMUST00000186940 Eif4g3Q80XI3 1579 aaKnown RBP38■■■■□ 3,67
Fn1-208ENSMUST00000186940 Il27Q8K3I6 234 aa37,99■■■■□ 3,67
Fn1-208ENSMUST00000186940 Dhx29Q6PGC1 1365 aaKnown RBP37,96■■■■□ 3,67
Fn1-208ENSMUST00000186940 TnnQ80Z71 1560 aa37,96■■■■□ 3,67
Fn1-208ENSMUST00000186940 Cngb1E1AZ71 1325 aa37,94■■■■□ 3,66
Fn1-208ENSMUST00000186940 Top2bQ64511 1612 aa37,92■■■■□ 3,66
Fn1-208ENSMUST00000186940 Urb2E9Q7L1 1524 aaKnown RBP37,88■■■■□ 3,65
Fn1-208ENSMUST00000186940 LrpprcQ6PB66 1392 aaKnown RBP37,88■■■■□ 3,65
Fn1-208ENSMUST00000186940 Plb1Q3TTY0 1478 aa37,84■■■■□ 3,65
Fn1-208ENSMUST00000186940 Camsap1A2AHC3 1581 aa37,78■■■■□ 3,64
Fn1-208ENSMUST00000186940 Shroom2A2ALU4 1481 aa37,72■■■■□ 3,63
Fn1-208ENSMUST00000186940 Crocc2F6XLV1 1638 aa37,69■■■■□ 3,62
Fn1-208ENSMUST00000186940 Fmn1Q05860 1466 aa37,65■■■■□ 3,62
Fn1-208ENSMUST00000186940 PogzQ8BZH4 1409 aaKnown RBP37,6■■■■□ 3,61
Fn1-208ENSMUST00000186940 Ift140E9PY46 1464 aa37,52■■■■□ 3,6
Fn1-208ENSMUST00000186940 Duox2A2AQ99 1517 aa37,41■■■■□ 3,58
Fn1-208ENSMUST00000186940 Pabpn1Q8CCS6 302 aaKnown RBP37,4■■■■□ 3,58
Fn1-208ENSMUST00000186940 Rusc2Q80U22 1514 aa37,36■■■■□ 3,57
Fn1-208ENSMUST00000186940 Grin2bQ01097 1482 aa37,29■■■■□ 3,56
Fn1-208ENSMUST00000186940 Col17a1Q07563 1470 aa37,22■■■■□ 3,55
Fn1-208ENSMUST00000186940 Disp1Q3TDN0 1521 aa37,2■■■■□ 3,55
Fn1-208ENSMUST00000186940 Pelp1Q9DBD5 1123 aaKnown RBP37,15■■■■□ 3,54
Fn1-208ENSMUST00000186940 Efcab5A0JP43 1406 aa37,13■■■■□ 3,53
Fn1-208ENSMUST00000186940 Cc2d2bA0A286YDU8 1405 aa37,04■■■■□ 3,52
Fn1-208ENSMUST00000186940 Nup160Q9Z0W3 1402 aaKnown RBP37,04■■■■□ 3,52
Fn1-208ENSMUST00000186940 Samd9lQ69Z37 1561 aa37,04■■■■□ 3,52
Fn1-208ENSMUST00000186940 Pbrm1Q8BSQ9 1634 aaKnown RBP36,97■■■■□ 3,51
Fn1-208ENSMUST00000186940 Ccdc88bQ4QRL3 1481 aa36,93■■■■□ 3,5
Fn1-208ENSMUST00000186940 Rad54l2Q99NG0 1466 aa36,85■■■■□ 3,49
Fn1-208ENSMUST00000186940 NrkQ9R0G8 1455 aa36,85■■■■□ 3,49
Fn1-208ENSMUST00000186940 Top2aQ01320 1528 aaKnown RBP36,82■■■■□ 3,49
Fn1-208ENSMUST00000186940 Setd1bQ8CFT2 1985 aa36,82■■■■□ 3,48
Fn1-208ENSMUST00000186940 Zcchc11B2RX14 1644 aaKnown RBP36,81■■■■□ 3,48
Fn1-208ENSMUST00000186940 Grin2aP35436 1464 aa36,78■■■■□ 3,48
Fn1-208ENSMUST00000186940 Magi3Q9EQJ9 1476 aa36,73■■■■□ 3,47
Fn1-208ENSMUST00000186940 AqrQ8CFQ3 1481 aaKnown RBP36,73■■■■□ 3,47
Fn1-208ENSMUST00000186940 Fgd6Q69ZL1 1399 aa36,69■■■■□ 3,46
Fn1-208ENSMUST00000186940 Chic1Q8CBW7 227 aa36,68■■■■□ 3,46
Fn1-208ENSMUST00000186940 Shroom4Q1W617 1475 aa36,64■■■■□ 3,46
Fn1-208ENSMUST00000186940 PtprkP35822 1457 aa36,59■■■■□ 3,45
Fn1-208ENSMUST00000186940 SynmQ70IV5 1561 aa36,5■■■■□ 3,43
Fn1-208ENSMUST00000186940 Pla2r1Q62028 1487 aa36,49■■■■□ 3,43
Fn1-208ENSMUST00000186940 Zeb1Q64318 1117 aa36,46■■■■□ 3,43
Fn1-208ENSMUST00000186940 Adgrl3Q80TS3 1537 aa36,45■■■■□ 3,43
Fn1-208ENSMUST00000186940 Gpatch8A2A6A1 1505 aa36,44■■■■□ 3,42
Fn1-208ENSMUST00000186940 Gapvd1Q6PAR5 1458 aa36,42■■■■□ 3,42
Fn1-208ENSMUST00000186940 AknaQ80VW7 1404 aa36,41■■■■□ 3,42
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms