RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Lamc1P02468 1607 aaKnown RBP11.24□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Asxl1P59598 1514 aa11.24□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Scaf11E9PZM7 1456 aaKnown RBP11.24□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Tmem131lQ3U3D7 1597 aa11.24□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Usp47Q8BY87 1376 aa11.24□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Upf2A2AT37 1269 aaKnown RBP11.23□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Afap1Q80YS6 731 aa11.23□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Rims2Q9EQZ7 1530 aa11.23□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 MyclP10166 368 aa11.22□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Ccdc27Q3V036 639 aa11.22□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Gm13695A2AK44 830 aa11.22□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Mrs2Q5NCE8 434 aa11.22□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Sart1Q9Z315 806 aaKnown RBP11.21□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 ShprhQ7TPQ3 1674 aa11.21□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Abcc5Q9R1X5 1436 aa11.21□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Iqgap1Q9JKF1 1657 aaKnown RBP11.21□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Pak3Q61036 559 aa11.21□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Med1Q925J9 1575 aa11.21□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Pik3c2gO70167 1506 aa11.21□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Prex1Q69ZK0 1650 aa11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Pkd2O35245 966 aa11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Plekhh2Q8C115 1491 aa11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Cabp1Q9JLK7 227 aa11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Prdm2A2A7B5 1709 aaKnown RBP11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Setd1aE9PYH6 1716 aa11.2□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Slc4a2P13808 1237 aaKnown RBP11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Rtn4Q99P72 1162 aaKnown RBP11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Nrxn3Q6P9K9 1571 aa11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Lmtk3Q5XJV6 1424 aa11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Adgrl2Q8JZZ7 1487 aa11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Itsn1Q9Z0R4 1714 aa11.19□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Thsd7aQ69ZU6 1645 aa11.18□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Safb2Q80YR5 991 aaKnown RBP11.18□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Usp54Q8BL06 1588 aaKnown RBP11.18□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Map3k5O35099 1380 aa11.18□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Znf692Q3U381 531 aa11.17□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Zfp644E9QA22 1323 aa11.17□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Eif2ak4Q9QZ05 1648 aa11.17□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Prdm16A2A935 1275 aa11.16□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Exoc6Q8R313 802 aa11.16□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Mbd5B1AYB6 1498 aa11.16□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Robo2Q7TPD3 1470 aa11.16□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 Wwc2Q6NXJ0 1187 aa11.15□□□□□ -0.62
Cpsf6-208ENSMUST00000177145 PnisrA2AJT4 805 aaKnown RBP11.14□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Akap12Q9WTQ5 1684 aa11.14□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Ythdc1E9Q5K9 736 aaKnown RBP11.14□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 NeflP08551 543 aa11.14□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Spryd3E9Q9B3 442 aa11.13□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Kif13aQ9EQW7 1749 aa11.13□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Hfm1D3Z4R1 1434 aa11.13□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Rsph4aQ8BYM7 716 aa11.13□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Mtus2Q3UHD3 1353 aa11.12□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 DnmbpQ6TXD4 1580 aa11.12□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 ChgaP26339 463 aaKnown RBP11.12□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Il16O54824 1322 aa11.11□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Col18a1P39061 1774 aa11.11□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Ino80Q6ZPV2 1559 aa11.11□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Plekhg5Q66T02 1073 aa11.1□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Hspa1lP16627 641 aa11.1□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Adgrb3Q80ZF8 1522 aa11.09□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Cwc22Q8C5N3 908 aaKnown RBP11.09□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Dapk1Q80YE7 1442 aa11.09□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 Mug2P28666 1451 aa11.08□□□□□ -0.63
Cpsf6-208ENSMUST00000177145 GphnQ8BUV3 769 aaKnown RBP11.08□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 IbspQ61711 324 aa11.08□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Arap3Q8R5G7 1538 aa11.08□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Dhx9O70133 1380 aaKnown RBP11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Myom3A2ABU4 1439 aa11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 CanxP35564 591 aaKnown RBP11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Kif1bQ60575 1816 aaKnown RBP11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Liat1Q810M6 228 aa11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Ssh2Q5SW75 1423 aa11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Rapgef3Q8VCC8 918 aa11.07□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Cdk13Q69ZA1 1511 aaKnown RBP11.06□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Rad21Q61550 635 aaKnown RBP11.06□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 AnkarA2RT91 1465 aa11.04□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Tecpr2Q3UH45 1423 aa11.04□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Rgl3Q3UYI5 709 aa11.04□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 DroshaQ5HZJ0 1373 aaKnown RBP11.03□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Dbr1Q923B1 550 aa11.03□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Rundc1Q0VDN7 615 aa11.03□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Pip4k2bQ80XI4 416 aa11.03□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Ofd1Q80Z25 1017 aa11.03□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Pik3c2aQ61194 1686 aa11.02□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 Ttll5Q8CHB8 1328 aa11.02□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 B4galnt3Q6L8S8 986 aa11.02□□□□□ -0.64
Cpsf6-208ENSMUST00000177145 RalgapbQ8BQZ4 1484 aa11.02□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Uggt1Q6P5E4 1551 aa11.02□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Egfem1Q8C088 590 aa11.02□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 PplQ9R269 1755 aa11.01□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Vsig10D3YX43 558 aa11.01□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Lmod3E9QA62 571 aa11.01□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Card11Q8CIS0 1159 aa11.01□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Slit2Q9R1B9 1521 aa11□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Ehbp1l1Q99MS7 1716 aa11□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Fgd1P52734 960 aa11□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 L3mbtl2P59178 703 aa11□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Cpsf1Q9EPU4 1441 aaKnown RBP10.99□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Amigo3Q8C2S7 508 aa10.99□□□□□ -0.65
Cpsf6-208ENSMUST00000177145 Gtf3c5Q8R2T8 520 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms