RNA–Protein interactions for RNA: ENSMUST00000162244.7

Cpsf4-207, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-207ENSMUST00000162244 Rimbp3Q3V0F0 1606 aa25■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Scaf11E9PZM7 1456 aaKnown RBP24.99■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Mroh1E0CZ22 1640 aa24.99■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Gemin5Q8BX17 1502 aaKnown RBP24.99■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Hspa5P20029 655 aaKnown RBP24.98■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Ncoa1P70365 1447 aa24.96■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 NefmP08553 848 aa24.96■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Pip4k2bQ80XI4 416 aa24.96■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Washc2Q6PGL7 1334 aa24.96■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Prdm2A2A7B5 1709 aaKnown RBP24.95■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Rgl3Q3UYI5 709 aa24.95■■□□□ 1.59
Cpsf4-207ENSMUST00000162244 Ehbp1l1Q99MS7 1716 aa24.95■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Rims2Q9EQZ7 1530 aa24.94■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Scn4aQ9ER60 1841 aa24.93■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Lmtk3Q5XJV6 1424 aa24.91■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Atp1b4Q99ME6 356 aa24.9■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Acin1Q9JIX8 1338 aaKnown RBP24.89■■□□□ 1.58
Cpsf4-207ENSMUST00000162244 Phlpp1Q8CHE4 1687 aa24.89■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 PalldQ9ET54 1408 aa24.88■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 Zc3h13E9Q784 1729 aaKnown RBP24.84■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 AU022751B1B0V2 589 aa24.84■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 Rapgef3Q8VCC8 918 aa24.84■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 PplQ9R269 1755 aa24.84■■□□□ 1.57
Cpsf4-207ENSMUST00000162244 Ifit1bl1D3Z6F0 470 aa24.81■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Plxnc1Q9QZC2 1574 aa24.8■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Ltbp4Q8K4G1 1666 aa24.8■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Slc52a2Q9D8F3 450 aa24.8■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Shq1Q7TMX5 569 aa24.79■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Myo3aQ8K3H5 1613 aa24.78■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Tulp4Q9JIL5 1547 aa24.78■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Srpk2O54781 681 aaKnown RBP24.78■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Os9Q8K2C7 672 aa24.78■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Rims1Q99NE5 1463 aa24.78■■□□□ 1.56
Cpsf4-207ENSMUST00000162244 Nrxn3Q6P9K9 1571 aa24.76■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Arhgef28P97433 1693 aa24.76■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Eif2ak4Q9QZ05 1648 aa24.76■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Kdm2aP59997 1161 aa24.76■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Neurod1Q60867 357 aa24.75■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Grwd1Q810D6 446 aaKnown RBP24.75■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Q9D9H8 365 aa24.75■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Iqgap1Q9JKF1 1657 aaKnown RBP24.75■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 PzpQ61838 1495 aa24.74■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Adamts13Q769J6 1426 aa24.73■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Slit3Q9WVB4 1523 aa24.72■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 TonslQ6NZL6 1363 aa24.72■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Gm20521D3Z5F7 333 aa24.71■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Med1Q925J9 1575 aa24.71■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 IghaA0A0A6YXW6 389 aa24.7■■□□□ 1.55
Cpsf4-207ENSMUST00000162244 Pik3r4Q8VD65 1358 aa24.69■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Polr3aB2RXC6 1390 aa24.69■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Asxl2Q8BZ32 1370 aa24.68■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Fan1Q69ZT1 1020 aa24.67■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Myom1Q62234 1667 aaKnown RBP24.67■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Cdk13Q69ZA1 1511 aaKnown RBP24.67■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Cep152A2AUM9 1736 aaKnown RBP24.65■■□□□ 1.54
Cpsf4-207ENSMUST00000162244 Puf60Q3UEB3 564 aaKnown RBP24.63■■□□□ 1.53
Cpsf4-207ENSMUST00000162244 Cpsf1Q9EPU4 1441 aaKnown RBP24.62■■□□□ 1.53
Cpsf4-207ENSMUST00000162244 Setd1aE9PYH6 1716 aa24.61■■□□□ 1.53
Cpsf4-207ENSMUST00000162244 Utp14aQ640M1 767 aaKnown RBP24.58■■□□□ 1.53
Cpsf4-207ENSMUST00000162244 IqubQ8CDK3 788 aa24.56■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Stk26Q99JT2 416 aa24.55■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 MaddQ80U28 1577 aa24.55■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Stard8Q8K031 1019 aa24.54■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 HnrnpmQ9D0E1 729 aaKnown RBP24.54■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Gli3Q61602 1583 aa24.54■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Arap3Q8R5G7 1538 aa24.54■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Tns3Q5SSZ5 1440 aa24.52■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Mbd5B1AYB6 1498 aa24.52■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Mug2P28666 1451 aa24.52■■□□□ 1.52
Cpsf4-207ENSMUST00000162244 Thsd7aQ69ZU6 1645 aa24.51■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Lrrc7Q80TE7 1490 aa24.51■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Tubgcp6G5E8P0 1769 aa24.49■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Usp40Q8BWR4 1235 aa24.49■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Dapk1Q80YE7 1442 aa24.48■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Stag3O70576 1240 aa24.47■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Plekhg1F6S200 1446 aa24.47■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Rundc1Q0VDN7 615 aa24.46■■□□□ 1.51
Cpsf4-207ENSMUST00000162244 Las1lA2BE28 776 aaKnown RBP24.45■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Cps1Q8C196 1500 aa24.45■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Card11Q8CIS0 1159 aa24.44■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Gtf2e1Q9D0D5 440 aa24.44■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Cdk5rap2Q8K389 1822 aa24.44■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Slain2Q8CI08 581 aa24.42■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Srcin1Q9QWI6 1250 aa24.42■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Rpgrip1Q9EPQ2 1331 aa24.41■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Nphp4P59240 1425 aa24.41■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Tmem94Q7TSH8 1360 aa24.4■■□□□ 1.5
Cpsf4-207ENSMUST00000162244 Evi5lH3BKQ3 813 aa24.38■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 RalgapbQ8BQZ4 1484 aa24.37■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Q3UJC8 639 aa24.37■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Unc13bQ9Z1N9 1602 aa24.35■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Col18a1P39061 1774 aa24.34■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Atp2b2Q9R0K7 1198 aa24.34■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 DnmbpQ6TXD4 1580 aa24.34■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Cep170bQ80U49 1574 aa24.33■■□□□ 1.49
Cpsf4-207ENSMUST00000162244 Atf3Q60765 181 aa24.32■■□□□ 1.48
Cpsf4-207ENSMUST00000162244 Bcl11bQ99PV8 884 aa24.31■■□□□ 1.48
Cpsf4-207ENSMUST00000162244 Sipa1l1Q8C0T5 1782 aa24.31■■□□□ 1.48
Cpsf4-207ENSMUST00000162244 Iqsec2Q5DU25 1478 aa24.31■■□□□ 1.48
Cpsf4-207ENSMUST00000162244 Ift172Q6VH22 1749 aa24.31■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms