RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 Tulp4Q9JIL5 1547 aa28.95■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Ehbp1l1Q99MS7 1716 aa28.95■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Ppargc1bQ8VHJ7 1014 aa28.93■■■□□ 2.22
Tpm1-212ENSMUST00000113696 GphnQ8BUV3 769 aaKnown RBP28.92■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Cpsf1Q9EPU4 1441 aaKnown RBP28.92■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Mbd5B1AYB6 1498 aa28.91■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Prdm2A2A7B5 1709 aaKnown RBP28.9■■■□□ 2.22
Tpm1-212ENSMUST00000113696 AU022751B1B0V2 589 aa28.89■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Itsn1Q9Z0R4 1714 aa28.89■■■□□ 2.22
Tpm1-212ENSMUST00000113696 Kdm2aP59997 1161 aa28.89■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Txndc2Q6P902 515 aa28.89■■■□□ 2.21
Tpm1-212ENSMUST00000113696 P3h3Q8CG70 732 aa28.88■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Mug2P28666 1451 aa28.87■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Rims1Q99NE5 1463 aa28.87■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Os9Q8K2C7 672 aa28.86■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Iqgap1Q9JKF1 1657 aaKnown RBP28.86■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Kif13aQ9EQW7 1749 aa28.86■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Kdm5aQ3UXZ9 1690 aa28.85■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Srpk2O54781 681 aaKnown RBP28.84■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Dapk1Q80YE7 1442 aa28.84■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Cdk13Q69ZA1 1511 aaKnown RBP28.83■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Psme1P97371 249 aa28.83■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Atp1b4Q99ME6 356 aa28.83■■■□□ 2.21
Tpm1-212ENSMUST00000113696 Gm20521D3Z5F7 333 aa28.81■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Chd2E9PZM4 1827 aaKnown RBP28.81■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Rundc1Q0VDN7 615 aa28.8■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Plxnc1Q9QZC2 1574 aa28.79■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Gm13695A2AK44 830 aa28.78■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Arid4bA2CG63 1314 aaKnown RBP28.78■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Slc52a2Q9D8F3 450 aa28.77■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Topaz1E5FYH1 1653 aa28.77■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Gemin5Q8BX17 1502 aaKnown RBP28.77■■■□□ 2.2
Tpm1-212ENSMUST00000113696 Brwd3A2AHJ4 1799 aa28.76■■■□□ 2.19
Tpm1-212ENSMUST00000113696 Card11Q8CIS0 1159 aa28.76■■■□□ 2.19
Tpm1-212ENSMUST00000113696 Fan1Q69ZT1 1020 aa28.75■■■□□ 2.19
Tpm1-212ENSMUST00000113696 Shq1Q7TMX5 569 aa28.74■■■□□ 2.19
Tpm1-212ENSMUST00000113696 Myo3aQ8K3H5 1613 aa28.72■■■□□ 2.19
Tpm1-212ENSMUST00000113696 Cep152A2AUM9 1736 aaKnown RBP28.7■■■□□ 2.19
Tpm1-212ENSMUST00000113696 RalgapbQ8BQZ4 1484 aa28.69■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Puf60Q3UEB3 564 aaKnown RBP28.69■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Q9D9H8 365 aa28.68■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Aebp2Q9Z248 504 aaKnown RBP28.66■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Wdr66E9Q743 1299 aa28.66■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Myom1Q62234 1667 aaKnown RBP28.65■■■□□ 2.18
Tpm1-212ENSMUST00000113696 Zc3h13E9Q784 1729 aaKnown RBP28.64■■■□□ 2.17
Tpm1-212ENSMUST00000113696 PalldQ9ET54 1408 aa28.63■■■□□ 2.17
Tpm1-212ENSMUST00000113696 PplQ9R269 1755 aa28.62■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Cyb5rlB1AS42 316 aa28.6■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Stard8Q8K031 1019 aa28.6■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Scaf11E9PZM7 1456 aaKnown RBP28.6■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Usp40Q8BWR4 1235 aa28.6■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Cwc22Q8C5N3 908 aaKnown RBP28.58■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Asxl2Q8BZ32 1370 aa28.58■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Arhgef28P97433 1693 aa28.58■■■□□ 2.17
Tpm1-212ENSMUST00000113696 Sin3aQ60520 1274 aaKnown RBP28.57■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Lmtk3Q5XJV6 1424 aa28.57■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Eif2ak4Q9QZ05 1648 aa28.57■■■□□ 2.16
Tpm1-212ENSMUST00000113696 IghaA0A0A6YXW6 389 aa28.57■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Gtf2e1Q9D0D5 440 aa28.56■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Srcin1Q9QWI6 1250 aa28.56■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Lrrc7Q80TE7 1490 aa28.56■■■□□ 2.16
Tpm1-212ENSMUST00000113696 IqubQ8CDK3 788 aa28.55■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Rimbp3Q3V0F0 1606 aa28.55■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Stk26Q99JT2 416 aa28.55■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Dip2aQ8BWT5 1523 aa28.54■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Zbtb4Q5F293 982 aa28.54■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Rock2P70336 1388 aa28.53■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Slit3Q9WVB4 1523 aa28.53■■■□□ 2.16
Tpm1-212ENSMUST00000113696 PzpQ61838 1495 aa28.51■■■□□ 2.16
Tpm1-212ENSMUST00000113696 Nphp4P59240 1425 aa28.51■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Rims2Q9EQZ7 1530 aa28.51■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Stag3O70576 1240 aa28.5■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Utp14aQ640M1 767 aaKnown RBP28.49■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Setd1aE9PYH6 1716 aa28.48■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Cdk5rap2Q8K389 1822 aa28.48■■■□□ 2.15
Tpm1-212ENSMUST00000113696 Pik3r4Q8VD65 1358 aa28.46■■■□□ 2.15
Tpm1-212ENSMUST00000113696 MaddQ80U28 1577 aa28.45■■■□□ 2.14
Tpm1-212ENSMUST00000113696 Ncoa1P70365 1447 aa28.43■■■□□ 2.14
Tpm1-212ENSMUST00000113696 Pip4k2bQ80XI4 416 aa28.4■■■□□ 2.14
Tpm1-212ENSMUST00000113696 DnmbpQ6TXD4 1580 aa28.4■■■□□ 2.14
Tpm1-212ENSMUST00000113696 Phlpp1Q8CHE4 1687 aa28.38■■■□□ 2.13
Tpm1-212ENSMUST00000113696 Plekhg1F6S200 1446 aa28.38■■■□□ 2.13
Tpm1-212ENSMUST00000113696 ClspnQ80YR7 1315 aa28.37■■■□□ 2.13
Tpm1-212ENSMUST00000113696 Scn4aQ9ER60 1841 aa28.36■■■□□ 2.13
Tpm1-212ENSMUST00000113696 HnrnpmQ9D0E1 729 aaKnown RBP28.36■■■□□ 2.13
Tpm1-212ENSMUST00000113696 Pola1P33609 1465 aa28.33■■■□□ 2.13
Tpm1-212ENSMUST00000113696 CenpjQ569L8 1344 aa28.32■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Cep170bQ80U49 1574 aa28.32■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Sipa1l1Q8C0T5 1782 aa28.32■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Rapgef3Q8VCC8 918 aa28.32■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Nrxn3Q6P9K9 1571 aa28.31■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Med1Q925J9 1575 aa28.31■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Arap3Q8R5G7 1538 aa28.3■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Atp2b2Q9R0K7 1198 aa28.28■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Cps1Q8C196 1500 aa28.27■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Slc24a1Q91WD8 1130 aa28.27■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Mink1Q9JM52 1308 aa28.27■■■□□ 2.12
Tpm1-212ENSMUST00000113696 Gm16486A0A1D5RMD1 1434 aa28.24■■■□□ 2.11
Tpm1-212ENSMUST00000113696 Ltbp4Q8K4G1 1666 aa28.24■■■□□ 2.11
Tpm1-212ENSMUST00000113696 Plekhg5Q66T02 1073 aa28.23■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms