RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 Gm35339A0A140LHH9 1649 aa43.85■■■■■ 4.61
Tpm1-212ENSMUST00000113696 NischQ80TM9 1593 aa43.79■■■■■ 4.6
Tpm1-212ENSMUST00000113696 Abcc9P70170 1546 aa42.43■■■■■ 4.38
Tpm1-212ENSMUST00000113696 Abcc8B2RUS7 1588 aa42.1■■■■■ 4.33
Tpm1-212ENSMUST00000113696 ScribQ80U72 1612 aa40.02■■■■■ 4
Tpm1-212ENSMUST00000113696 NacadQ5SWP3 1504 aa39.01■■■■□ 3.84
Tpm1-212ENSMUST00000113696 Dcaf1Q80TR8 1506 aa38.99■■■■□ 3.83
Tpm1-212ENSMUST00000113696 Kdm5dQ62240 1548 aa38.99■■■■□ 3.83
Tpm1-212ENSMUST00000113696 Rhox8Q6VSS7 320 aa38.83■■■■□ 3.81
Tpm1-212ENSMUST00000113696 Rb1cc1Q9ESK9 1588 aa38.21■■■■□ 3.71
Tpm1-212ENSMUST00000113696 Sycp2Q9CUU3 1500 aa38.19■■■■□ 3.7
Tpm1-212ENSMUST00000113696 Baz1aO88379 1555 aa37.74■■■■□ 3.63
Tpm1-212ENSMUST00000113696 Ccdc180J3QNE4 1664 aa37.68■■■■□ 3.62
Tpm1-212ENSMUST00000113696 Crybg2B7ZCC2 1516 aa37.5■■■■□ 3.59
Tpm1-212ENSMUST00000113696 BicraF8VPZ9 1578 aa37.45■■■■□ 3.59
Tpm1-212ENSMUST00000113696 Zcchc6Q5BLK4 1491 aaKnown RBP37.16■■■■□ 3.54
Tpm1-212ENSMUST00000113696 Smarca2Q6DIC0 1577 aa36.7■■■■□ 3.47
Tpm1-212ENSMUST00000113696 Rtl1Q7M732 1744 aa36.62■■■■□ 3.45
Tpm1-212ENSMUST00000113696 Pds5bQ4VA53 1446 aaKnown RBP36.39■■■■□ 3.42
Tpm1-212ENSMUST00000113696 Cecr2E9Q2Z1 1453 aa36.32■■■■□ 3.41
Tpm1-212ENSMUST00000113696 Atad2bE9Q166 1460 aaKnown RBP36.19■■■■□ 3.38
Tpm1-212ENSMUST00000113696 Ccdc136Q3TVA9 1136 aa36.19■■■■□ 3.38
Tpm1-212ENSMUST00000113696 Smarca4Q3TKT4 1613 aaKnown RBP36.14■■■■□ 3.38
Tpm1-212ENSMUST00000113696 Brd4Q9ESU6 1400 aaKnown RBP35.84■■■■□ 3.33
Tpm1-212ENSMUST00000113696 Iqgap2Q3UQ44 1575 aa35.83■■■■□ 3.33
Tpm1-212ENSMUST00000113696 Trim41Q5NCC3 630 aa35.7■■■■□ 3.31
Tpm1-212ENSMUST00000113696 CftrP26361 1476 aa35.66■■■■□ 3.3
Tpm1-212ENSMUST00000113696 Ercc6F8VPZ5 1481 aa35.64■■■■□ 3.3
Tpm1-212ENSMUST00000113696 Thoc2B1AZI6 1594 aaKnown RBP35.64■■■■□ 3.3
Tpm1-212ENSMUST00000113696 Synj1Q8CHC4 1574 aa35.61■■■■□ 3.29
Tpm1-212ENSMUST00000113696 Cttnbp2B9EJA2 1648 aa35.5■■■■□ 3.27
Tpm1-212ENSMUST00000113696 Wdr62Q3U3T8 1523 aa35.4■■■■□ 3.26
Tpm1-212ENSMUST00000113696 Dnajc5bQ9CQ94 199 aa35.38■■■■□ 3.25
Tpm1-212ENSMUST00000113696 Frmpd1A2AKB4 1549 aa35.38■■■■□ 3.25
Tpm1-212ENSMUST00000113696 Esf1Q3V1V3 845 aaKnown RBP35.25■■■■□ 3.23
Tpm1-212ENSMUST00000113696 Cc2d2aQ8CFW7 1633 aa35.14■■■■□ 3.22
Tpm1-212ENSMUST00000113696 Phldb1Q6PDH0 1371 aaKnown RBP35.08■■■■□ 3.21
Tpm1-212ENSMUST00000113696 Fam135aQ6NS59 1506 aa35.04■■■■□ 3.2
Tpm1-212ENSMUST00000113696 Golga3P55937 1487 aa34.85■■■■□ 3.17
Tpm1-212ENSMUST00000113696 Cngb1E1AZ71 1325 aa34.81■■■■□ 3.16
Tpm1-212ENSMUST00000113696 Ubl4bQ9CQ84 188 aa34.79■■■■□ 3.16
Tpm1-212ENSMUST00000113696 Unc13aQ4KUS2 1712 aa34.7■■■■□ 3.14
Tpm1-212ENSMUST00000113696 Baz1bQ9Z277 1479 aa34.69■■■■□ 3.14
Tpm1-212ENSMUST00000113696 Rsf1E9PWW9 1441 aaKnown RBP34.59■■■■□ 3.13
Tpm1-212ENSMUST00000113696 Top2bQ64511 1612 aa34.56■■■■□ 3.12
Tpm1-212ENSMUST00000113696 Kif15Q6P9L6 1387 aa34.48■■■■□ 3.11
Tpm1-212ENSMUST00000113696 Lamc3Q9R0B6 1581 aa34.38■■■■□ 3.09
Tpm1-212ENSMUST00000113696 Mrc2Q64449 1479 aa34.29■■■■□ 3.08
Tpm1-212ENSMUST00000113696 Fmn1Q05860 1466 aa34.28■■■■□ 3.08
Tpm1-212ENSMUST00000113696 Cux2P70298 1426 aa34.26■■■■□ 3.07
Tpm1-212ENSMUST00000113696 HrcG5E8J6 738 aa34.21■■■■□ 3.07
Tpm1-212ENSMUST00000113696 TnnQ80Z71 1560 aa34.19■■■■□ 3.06
Tpm1-212ENSMUST00000113696 Ccdc88bQ4QRL3 1481 aa34.09■■■■□ 3.05
Tpm1-212ENSMUST00000113696 Npm1Q61937 292 aaKnown RBP34.04■■■■□ 3.04
Tpm1-212ENSMUST00000113696 Chic1Q8CBW7 227 aa34.01■■■■□ 3.04
Tpm1-212ENSMUST00000113696 Ccdc18Q640L5 1455 aa33.98■■■■□ 3.03
Tpm1-212ENSMUST00000113696 Il27Q8K3I6 234 aa33.95■■■■□ 3.03
Tpm1-212ENSMUST00000113696 Cep164Q5DU05 1446 aa33.92■■■■□ 3.02
Tpm1-212ENSMUST00000113696 Camsap1A2AHC3 1581 aa33.85■■■■□ 3.01
Tpm1-212ENSMUST00000113696 Top2aQ01320 1528 aaKnown RBP33.73■■■□□ 2.99
Tpm1-212ENSMUST00000113696 LrpprcQ6PB66 1392 aaKnown RBP33.69■■■□□ 2.98
Tpm1-212ENSMUST00000113696 Kif21aQ9QXL2 1672 aa33.64■■■□□ 2.98
Tpm1-212ENSMUST00000113696 Dhx29Q6PGC1 1365 aaKnown RBP33.6■■■□□ 2.97
Tpm1-212ENSMUST00000113696 Grin2bQ01097 1482 aa33.53■■■□□ 2.96
Tpm1-212ENSMUST00000113696 PogzQ8BZH4 1409 aaKnown RBP33.52■■■□□ 2.96
Tpm1-212ENSMUST00000113696 Gab3Q8BSM5 595 aa33.38■■■□□ 2.93
Tpm1-212ENSMUST00000113696 NrkQ9R0G8 1455 aa33.37■■■□□ 2.93
Tpm1-212ENSMUST00000113696 Duox2A2AQ99 1517 aa33.37■■■□□ 2.93
Tpm1-212ENSMUST00000113696 Lrriq1Q0P5X1 1673 aa33.37■■■□□ 2.93
Tpm1-212ENSMUST00000113696 Crocc2F6XLV1 1638 aa33.33■■■□□ 2.93
Tpm1-212ENSMUST00000113696 Efcab5A0JP43 1406 aa33.31■■■□□ 2.92
Tpm1-212ENSMUST00000113696 Plb1Q3TTY0 1478 aa33.3■■■□□ 2.92
Tpm1-212ENSMUST00000113696 Urb2E9Q7L1 1524 aaKnown RBP33.26■■■□□ 2.91
Tpm1-212ENSMUST00000113696 Shroom4Q1W617 1475 aa33.24■■■□□ 2.91
Tpm1-212ENSMUST00000113696 PtprkP35822 1457 aa33.21■■■□□ 2.91
Tpm1-212ENSMUST00000113696 Npm2Q80W85 207 aa33.19■■■□□ 2.9
Tpm1-212ENSMUST00000113696 Rapgef2Q8CHG7 1496 aa33.08■■■□□ 2.89
Tpm1-212ENSMUST00000113696 Ift140E9PY46 1464 aa33.06■■■□□ 2.88
Tpm1-212ENSMUST00000113696 Samd9lQ69Z37 1561 aa33.03■■■□□ 2.88
Tpm1-212ENSMUST00000113696 Zeb1Q64318 1117 aa33■■■□□ 2.87
Tpm1-212ENSMUST00000113696 Eif4g3Q80XI3 1579 aaKnown RBP32.93■■■□□ 2.86
Tpm1-212ENSMUST00000113696 Disp1Q3TDN0 1521 aa32.93■■■□□ 2.86
Tpm1-212ENSMUST00000113696 Rad54l2Q99NG0 1466 aa32.9■■■□□ 2.86
Tpm1-212ENSMUST00000113696 Cep162Q6ZQ06 1403 aa32.88■■■□□ 2.85
Tpm1-212ENSMUST00000113696 Mroh2bQ7M6Y6 1581 aa32.83■■■□□ 2.85
Tpm1-212ENSMUST00000113696 Arhgap35Q91YM2 1499 aa32.8■■■□□ 2.84
Tpm1-212ENSMUST00000113696 SynmQ70IV5 1561 aa32.8■■■□□ 2.84
Tpm1-212ENSMUST00000113696 Nup160Q9Z0W3 1402 aaKnown RBP32.76■■■□□ 2.83
Tpm1-212ENSMUST00000113696 Map3k1P53349 1493 aa32.74■■■□□ 2.83
Tpm1-212ENSMUST00000113696 Grin2aP35436 1464 aa32.72■■■□□ 2.83
Tpm1-212ENSMUST00000113696 Magi3Q9EQJ9 1476 aa32.72■■■□□ 2.83
Tpm1-212ENSMUST00000113696 Myt1lP97500 1187 aa32.71■■■□□ 2.83
Tpm1-212ENSMUST00000113696 Pbrm1Q8BSQ9 1634 aaKnown RBP32.7■■■□□ 2.82
Tpm1-212ENSMUST00000113696 Rusc2Q80U22 1514 aa32.7■■■□□ 2.82
Tpm1-212ENSMUST00000113696 Cc2d2bA0A286YDU8 1405 aa32.7■■■□□ 2.82
Tpm1-212ENSMUST00000113696 Eif4g1Q6NZJ6 1600 aaKnown RBP32.69■■■□□ 2.82
Tpm1-212ENSMUST00000113696 Pla2r1Q62028 1487 aa32.64■■■□□ 2.81
Tpm1-212ENSMUST00000113696 Carmil1Q6EDY6 1374 aa32.62■■■□□ 2.81
Tpm1-212ENSMUST00000113696 AqrQ8CFQ3 1481 aaKnown RBP32.6■■■□□ 2.81
Tpm1-212ENSMUST00000113696 Clip1Q922J3 1391 aa32.58■■■□□ 2.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms