RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Plb1Q3TTY0 1478 aa20.68■□□□□ 0.9
Usp47-201ENSMUST00000106653 Fam163aQ8CAA5 168 aa20.68■□□□□ 0.9
Usp47-201ENSMUST00000106653 Top2bQ64511 1612 aa20.68■□□□□ 0.9
Usp47-201ENSMUST00000106653 Camsap1A2AHC3 1581 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 Gnai1B2RSH2 354 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 Tpm3-rs7D3Z2H9 248 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 Gnai3Q9DC51 354 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 AampJ3QN89 436 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 AppP12023 770 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 Triml2E9PW10 424 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 CrebrfQ8CDG5 640 aaKnown RBP20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 Il16O54824 1322 aa20.67■□□□□ 0.9
Usp47-201ENSMUST00000106653 CadpsQ80TJ1 1355 aa20.66■□□□□ 0.9
Usp47-201ENSMUST00000106653 Swt1Q9DBQ9 907 aa20.66■□□□□ 0.9
Usp47-201ENSMUST00000106653 Dhx9O70133 1380 aaKnown RBP20.65■□□□□ 0.9
Usp47-201ENSMUST00000106653 Gsdma3Q5Y4Y6 464 aa20.65■□□□□ 0.9
Usp47-201ENSMUST00000106653 BicraF8VPZ9 1578 aa20.65■□□□□ 0.9
Usp47-201ENSMUST00000106653 Smc4Q8CG47 1286 aa20.65■□□□□ 0.9
Usp47-201ENSMUST00000106653 PnisrA2AJT4 805 aaKnown RBP20.64■□□□□ 0.89
Usp47-201ENSMUST00000106653 Wdr62Q3U3T8 1523 aa20.63■□□□□ 0.89
Usp47-201ENSMUST00000106653 Ric3Q8BPM6 367 aa20.63■□□□□ 0.89
Usp47-201ENSMUST00000106653 Rbm25B2RY56 838 aaKnown RBP20.63■□□□□ 0.89
Usp47-201ENSMUST00000106653 Rsph3aQ3UFY4 516 aa20.62■□□□□ 0.89
Usp47-201ENSMUST00000106653 Ppp2r1aQ76MZ3 589 aa20.62■□□□□ 0.89
Usp47-201ENSMUST00000106653 Kif16bB1AVY7 1312 aa20.62■□□□□ 0.89
Usp47-201ENSMUST00000106653 Cald1E9QA15 768 aaKnown RBP20.62■□□□□ 0.89
Usp47-201ENSMUST00000106653 Q7TT23 1179 aa20.61■□□□□ 0.89
Usp47-201ENSMUST00000106653 Crocc2F6XLV1 1638 aa20.61■□□□□ 0.89
Usp47-201ENSMUST00000106653 Tceal9Q9DD24 104 aa20.61■□□□□ 0.89
Usp47-201ENSMUST00000106653 Rab3gap2Q8BMG7 1366 aa20.6■□□□□ 0.89
Usp47-201ENSMUST00000106653 AqrQ8CFQ3 1481 aaKnown RBP20.59■□□□□ 0.89
Usp47-201ENSMUST00000106653 Pank1Q8K4K6 548 aa20.58■□□□□ 0.89
Usp47-201ENSMUST00000106653 Eif2s2Q99L45 331 aaKnown RBP20.58■□□□□ 0.89
Usp47-201ENSMUST00000106653 Ccdc47Q9D024 483 aaKnown RBP20.58■□□□□ 0.89
Usp47-201ENSMUST00000106653 TchhA0A0B4J1F9 1599 aa20.58■□□□□ 0.89
Usp47-201ENSMUST00000106653 Plekhh1Q80TI1 1356 aa20.58■□□□□ 0.89
Usp47-201ENSMUST00000106653 Ak7Q9D2H2 614 aa20.57■□□□□ 0.88
Usp47-201ENSMUST00000106653 Filip1lQ6P6L0 1131 aa20.57■□□□□ 0.88
Usp47-201ENSMUST00000106653 St18Q80TY4 1045 aa20.57■□□□□ 0.88
Usp47-201ENSMUST00000106653 Ccer1Q9CQL2 403 aa20.57■□□□□ 0.88
Usp47-201ENSMUST00000106653 Nectin2P32507 530 aa20.56■□□□□ 0.88
Usp47-201ENSMUST00000106653 TatQ8QZR1 454 aa20.56■□□□□ 0.88
Usp47-201ENSMUST00000106653 Atf3Q60765 181 aa20.55■□□□□ 0.88
Usp47-201ENSMUST00000106653 Ubap1lG3UW59 384 aa20.55■□□□□ 0.88
Usp47-201ENSMUST00000106653 Slc4a2P13808 1237 aaKnown RBP20.55■□□□□ 0.88
Usp47-201ENSMUST00000106653 SynmQ70IV5 1561 aa20.55■□□□□ 0.88
Usp47-201ENSMUST00000106653 NexmifQ5DTT1 1515 aa20.54■□□□□ 0.88
Usp47-201ENSMUST00000106653 SlkO54988 1233 aa20.54■□□□□ 0.88
Usp47-201ENSMUST00000106653 Pcf11G3X9Z4 1553 aa20.53■□□□□ 0.88
Usp47-201ENSMUST00000106653 Afap1Q80YS6 731 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Prkrip1Q9CWV6 186 aaKnown RBP20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Casq1O09165 405 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Nutm1Q8BHP2 1126 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Atl3Q91YH5 541 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Lamc3Q9R0B6 1581 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Mug1P28665 1476 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Mre11Q61216 706 aa20.52■□□□□ 0.88
Usp47-201ENSMUST00000106653 Sv2bQ8BG39 683 aa20.51■□□□□ 0.87
Usp47-201ENSMUST00000106653 Znf710Q3U288 666 aa20.51■□□□□ 0.87
Usp47-201ENSMUST00000106653 Tpd52l1O54818 204 aa20.51■□□□□ 0.87
Usp47-201ENSMUST00000106653 Bcl11aQ9QYE3 773 aa20.51■□□□□ 0.87
Usp47-201ENSMUST00000106653 Pip4k2bQ80XI4 416 aa20.5■□□□□ 0.87
Usp47-201ENSMUST00000106653 Rfx1P48377 963 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Plekhg5Q66T02 1073 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Bcl11bQ99PV8 884 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Ccdc171E9Q1U1 1324 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 MsnP26041 577 aaKnown RBP20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 RdxP26043 583 aaKnown RBP20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Ddx11Q6AXC6 880 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Sirt1Q923E4 737 aa20.49■□□□□ 0.87
Usp47-201ENSMUST00000106653 Cavin4A2AMM0 362 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 KinQ8K339 391 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Naip2Q9QUK4 1447 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Magi1Q6RHR9 1471 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Gm10471E9Q1C7 252 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Zfp444Q3TDV8 331 aaKnown RBP20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 A2mQ6GQT1 1474 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Cdk19Q8BWD8 501 aa20.48■□□□□ 0.87
Usp47-201ENSMUST00000106653 Cfdp1O88271 295 aaKnown RBP20.47■□□□□ 0.87
Usp47-201ENSMUST00000106653 Nap1l3Q794H2 544 aa20.47■□□□□ 0.87
Usp47-201ENSMUST00000106653 Sf3a1Q8K4Z5 791 aaKnown RBP20.47■□□□□ 0.87
Usp47-201ENSMUST00000106653 Zpr1Q62384 459 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Bcl2l13P59017 434 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Gprasp1Q5U4C1 1347 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Neo1P97798 1493 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Rabep1O35551 862 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Q8C5K5 320 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Calcoco2A2A6M5 331 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Neurod6P48986 337 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Q9D2X8 372 aa20.46■□□□□ 0.87
Usp47-201ENSMUST00000106653 Apaf1O88879 1249 aa20.45■□□□□ 0.86
Usp47-201ENSMUST00000106653 Cetn4Q8K4K1 168 aa20.45■□□□□ 0.86
Usp47-201ENSMUST00000106653 Hmox1P14901 289 aa20.45■□□□□ 0.86
Usp47-201ENSMUST00000106653 MpripP97434 1024 aa20.45■□□□□ 0.86
Usp47-201ENSMUST00000106653 HypkQ9CR41 129 aa20.44■□□□□ 0.86
Usp47-201ENSMUST00000106653 Cspp1B2RX88 1205 aa20.43■□□□□ 0.86
Usp47-201ENSMUST00000106653 Erc2Q6PH08 957 aa20.43■□□□□ 0.86
Usp47-201ENSMUST00000106653 Rnf20Q5DTM8 973 aa20.43■□□□□ 0.86
Usp47-201ENSMUST00000106653 KarsQ99MN1 595 aaKnown RBP20.43■□□□□ 0.86
Usp47-201ENSMUST00000106653 Phactr2B1AVP0 632 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms