RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 IghaA0A0A6YXW6 389 aa18.35■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Ube2uB1AUC4 352 aa18.35■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 PplQ9R269 1755 aa18.35■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Gm13695A2AK44 830 aa18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Erich6D3Z6S9 713 aa18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 P3h3Q8CG70 732 aa18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Stk24Q99KH8 431 aa18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Prdm2A2A7B5 1709 aaKnown RBP18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Myo3aQ8K3H5 1613 aa18.34■□□□□ 0.53
Ccdc28b-202ENSMUST00000106035 Amigo3Q8C2S7 508 aa18.33■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Edc4Q3UJB9 1406 aaKnown RBP18.32■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Mroh1E0CZ22 1640 aa18.32■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Thsd7aQ69ZU6 1645 aa18.32■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Mbd5B1AYB6 1498 aa18.32■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 ErbinQ80TH2 1402 aa18.31■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Cdk13Q69ZA1 1511 aaKnown RBP18.28■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Col18a1P39061 1774 aa18.28■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 AatkQ80YE4 1365 aa18.28■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Abca8aQ8K442 1620 aa18.27■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Ankrd36D3Z4K0 1415 aa18.27■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Hdac5Q9Z2V6 1113 aa18.27■□□□□ 0.52
Ccdc28b-202ENSMUST00000106035 Pik3c2gO70167 1506 aa18.27■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Slit3Q9WVB4 1523 aa18.27■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Rprd2Q6NXI6 1469 aaKnown RBP18.26■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 DnmbpQ6TXD4 1580 aa18.25■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Sall3Q62255 1320 aa18.24■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Brinp3Q499E0 766 aa18.24■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Arhgef28P97433 1693 aa18.24■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Mphosph9A6H5Y1 991 aa18.23■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Tom1O88746 492 aa18.23■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Ehbp1l1Q99MS7 1716 aa18.23■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Arap3Q8R5G7 1538 aa18.23■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Dhx9O70133 1380 aaKnown RBP18.21■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Tns3Q5SSZ5 1440 aa18.21■□□□□ 0.51
Ccdc28b-202ENSMUST00000106035 Pik3r4Q8VD65 1358 aa18.2■□□□□ 0.5
Ccdc28b-202ENSMUST00000106035 Asxl2Q8BZ32 1370 aa18.19■□□□□ 0.5
Ccdc28b-202ENSMUST00000106035 Slain2Q8CI08 581 aa18.19■□□□□ 0.5
Ccdc28b-202ENSMUST00000106035 AU022751B1B0V2 589 aa18.18■□□□□ 0.5
Ccdc28b-202ENSMUST00000106035 Gimap5Q8BWF2 308 aa18.15■□□□□ 0.5
Ccdc28b-202ENSMUST00000106035 Ccer2J3QPU5 274 aa18.13■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Ppip5k1A2ARP1 1436 aa18.13■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Kif21bQ9QXL1 1668 aa18.12■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Evi5lH3BKQ3 813 aa18.12■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Q9D9H8 365 aa18.11■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Atp1b4Q99ME6 356 aa18.1■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Pkd2O35245 966 aa18.09■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Shq1Q7TMX5 569 aa18.09■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Unc13bQ9Z1N9 1602 aa18.09■□□□□ 0.49
Ccdc28b-202ENSMUST00000106035 Cypt1Q8CH20 168 aa18.08■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Pik3c2aQ61194 1686 aa18.07■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Myom1Q62234 1667 aaKnown RBP18.07■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Mroh3A0A1D5RM54 893 aa18.07■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Nwd1A6H603 1563 aa18.07■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Plxnc1Q9QZC2 1574 aa18.07■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Dapk1Q80YE7 1442 aa18.06■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 HnrnpmQ9D0E1 729 aaKnown RBP18.06■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Ttll13A4Q9F6 804 aa18.05■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Dot1lQ6XZL8 1540 aa18.04■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Atf3Q60765 181 aa18.04■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Tmem94Q7TSH8 1360 aa18.04■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Fbln2P37889 1221 aa18.03■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Slc5a4bQ91ZP4 660 aa18.03■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Nyap1Q6PFX7 833 aa18.02■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 Slc52a2Q9D8F3 450 aa18.02■□□□□ 0.48
Ccdc28b-202ENSMUST00000106035 MaddQ80U28 1577 aa18.01■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Col14a1Q80X19 1797 aa18.01■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Rims1Q99NE5 1463 aa18.01■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Qtrt2B8ZXI1 415 aa18■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Rock1P70335 1354 aa18■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Washc2Q6PGL7 1334 aa17.99■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Fnbp4Q6ZQ03 1031 aa17.99■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Cps1Q8C196 1500 aa17.98■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 Cypt2Q6P924 180 aa17.97■□□□□ 0.47
Ccdc28b-202ENSMUST00000106035 KdrP35918 1367 aa17.95■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Adgrl1Q80TR1 1466 aa17.95■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Slit2Q9R1B9 1521 aa17.93■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Ift172Q6VH22 1749 aa17.93■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 NalcnQ8BXR5 1738 aa17.91■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Tulp4Q9JIL5 1547 aa17.91■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Utp14aQ640M1 767 aaKnown RBP17.9■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Kif7B7ZNG0 1348 aa17.9■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 DccP70211 1447 aa17.89■□□□□ 0.46
Ccdc28b-202ENSMUST00000106035 Sema6bO54951 886 aa17.89■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Ybx3Q9JKB3 361 aaKnown RBP17.89■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Adamts13Q769J6 1426 aa17.89■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Cntnap1O54991 1385 aa17.88■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 C3P01027 1663 aa17.87■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Itsn2Q9Z0R6 1659 aa17.87■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Gm10563F6WIE4 79 aa17.87■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Q3UJC8 639 aa17.87■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Znf526Q8BI66 675 aa17.86■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Kif20bQ80WE4 1774 aaKnown RBP17.86■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Srpk2O54781 681 aaKnown RBP17.85■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 PtprvP70289 1705 aa17.85■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Kcna6Q61923 529 aa17.85■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Ehmt2Q9Z148 1263 aaKnown RBP17.85■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Zfp142G5E869 1843 aa17.84■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Kif24Q6NWW5 1356 aa17.84■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Stk26Q99JT2 416 aa17.84■□□□□ 0.45
Ccdc28b-202ENSMUST00000106035 Siglec1Q62230 1695 aa17.83■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms