RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Zbtb7cQ8VCZ7 619 aa13.44□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Adamtsl1Q8BLI0 1745 aa13.44□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Ppef1O35655 650 aa13.43□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Ankrd36D3Z4K0 1415 aa13.42□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Sgsm1Q8BPQ7 1093 aa13.42□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Rsph4aQ8BYM7 716 aa13.42□□□□□ -0.26
Scn8a-202ENSMUST00000096198 NexmifQ5DTT1 1515 aa13.42□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Topbp1Q6ZQF0 1515 aa13.4□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Kif13aQ9EQW7 1749 aa13.4□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Ddx17Q501J6 650 aaKnown RBP13.4□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Zcwpw1Q6IR42 630 aa13.4□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Plch2A2AP18 1501 aa13.39□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Igf2rQ07113 2483 aaKnown RBP13.38□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Adgrb3Q80ZF8 1522 aa13.38□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Tnks1bp1P58871 1720 aa13.37□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Emilin2Q8K482 1074 aa13.37□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Rrp7aQ9D1C9 280 aaKnown RBP13.37□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Tns3Q5SSZ5 1440 aa13.37□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Adgrl2Q8JZZ7 1487 aa13.36□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Ehbp1l1Q99MS7 1716 aa13.36□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Myo3aQ8K3H5 1613 aa13.35□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Gm13695A2AK44 830 aa13.35□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Atf3Q60765 181 aa13.34□□□□□ -0.27
Scn8a-202ENSMUST00000096198 P3h3Q8CG70 732 aa13.34□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Ehmt2Q9Z148 1263 aaKnown RBP13.34□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Abca8aQ8K442 1620 aa13.34□□□□□ -0.27
Scn8a-202ENSMUST00000096198 Sf3b2Q3UJB0 878 aaKnown RBP13.32□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Kif24Q6NWW5 1356 aa13.32□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Asxl2Q8BZ32 1370 aa13.32□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Itsn1Q9Z0R4 1714 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Tex14Q7M6U3 1450 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Rims1Q99NE5 1463 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Magea1O89006 320 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Magea5O89009 320 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 En2P09066 324 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Magea2Q9R2A2 320 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Prex1Q69ZK0 1650 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Akap12Q9WTQ5 1684 aa13.3□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Fmn2Q9JL04 1578 aa13.29□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Lrp5Q91VN0 1614 aa13.29□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Kiaa0319Q5SZV5 1081 aa13.29□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Psrc1Q9D0P7 329 aa13.28□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Caskin1Q6P9K8 1431 aa13.28□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Myo5cE9Q1F5 1742 aa13.27□□□□□ -0.28
Scn8a-202ENSMUST00000096198 Ddx54Q8K4L0 874 aaKnown RBP13.27□□□□□ -0.29
Scn8a-202ENSMUST00000096198 KdrP35918 1367 aa13.26□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Setd5Q5XJV7 1441 aa13.26□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Psme1P97371 249 aa13.25□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Adamts7Q68SA9 1657 aa13.24□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Plekhh2Q8C115 1491 aa13.24□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Gm1043A0A140LJC2 1431 aa13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Lmtk3Q5XJV6 1424 aa13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Ubxn2bQ0KL01 331 aa13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Ezh2Q61188 746 aaKnown RBP13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Acsbg1Q99PU5 721 aa13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Tnrc6cQ3UHC0 1690 aaKnown RBP13.23□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Ltbp1Q8CG19 1712 aa13.22□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Tmem94Q7TSH8 1360 aa13.22□□□□□ -0.29
Scn8a-202ENSMUST00000096198 InhbeO08717 350 aa13.22□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Usp54Q8BL06 1588 aaKnown RBP13.21□□□□□ -0.29
Scn8a-202ENSMUST00000096198 Abca17E9PX95 1733 aa13.21□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Lamc1P02468 1607 aaKnown RBP13.21□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Lmtk2Q3TYD6 1471 aa13.2□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Unc13bQ9Z1N9 1602 aa13.2□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Dapk1Q80YE7 1442 aa13.19□□□□□ -0.3
Scn8a-202ENSMUST00000096198 GnpatP98192 678 aa13.18□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Fhad1A6PWD2 1420 aa13.18□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Naip7Q9JIB3 1402 aa13.18□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Hnrnpul2Q00PI9 745 aaKnown RBP13.17□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Grwd1Q810D6 446 aaKnown RBP13.17□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Arhgef1Q61210 920 aaKnown RBP13.16□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Tarbp1E9Q368 1579 aa13.15□□□□□ -0.3
Scn8a-202ENSMUST00000096198 Spag9Q58A65 1321 aaKnown RBP13.14□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Prdm16A2A935 1275 aa13.14□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Col14a1Q80X19 1797 aa13.12□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Uggt1Q6P5E4 1551 aa13.11□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Efcab6Q6P1E8 1516 aa13.11□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Plekhg1F6S200 1446 aa13.11□□□□□ -0.31
Scn8a-202ENSMUST00000096198 N4bp2F8VQG7 1678 aaKnown RBP13.11□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Skint5A7XUY5 1461 aa13.1□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Podxl2Q8CAE9 603 aa13.1□□□□□ -0.31
Scn8a-202ENSMUST00000096198 PalldQ9ET54 1408 aa13.1□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Ly75Q60767 1723 aa13.1□□□□□ -0.31
Scn8a-202ENSMUST00000096198 NalcnQ8BXR5 1738 aa13.1□□□□□ -0.31
Scn8a-202ENSMUST00000096198 Arhgef28P97433 1693 aa13.08□□□□□ -0.31
Scn8a-202ENSMUST00000096198 UtrnE9Q6R7 3430 aa13.08□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Ino80Q6ZPV2 1559 aa13.07□□□□□ -0.32
Scn8a-202ENSMUST00000096198 PplQ9R269 1755 aa13.07□□□□□ -0.32
Scn8a-202ENSMUST00000096198 WasP70315 520 aa13.07□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Gpr150Q8BL07 427 aa13.07□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Pik3c2bE9QAN8 1632 aa13.03□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Lrrc59Q922Q8 307 aaKnown RBP13.03□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Kcnq2Q9Z351 759 aa13.03□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Vps8Q0P5W1 1427 aa13.03□□□□□ -0.32
Scn8a-202ENSMUST00000096198 Apba2P98084 750 aa13.02□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Ccdc85cE9Q6B2 420 aa13.01□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Rnf180Q3U827 592 aa13.01□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Fam122aQ9DB52 284 aa13.01□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Slit3Q9WVB4 1523 aa13.01□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Col26a1Q91VF6 440 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms