RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Kif16bB1AVY7 1312 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Cttnbp2B9EJA2 1648 aa12.27□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Atp2b2Q9R0K7 1198 aa12.27□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Slc4a2P13808 1237 aaKnown RBP12.27□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Prkrip1Q9CWV6 186 aaKnown RBP12.27□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Q9D9H8 365 aa12.27□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Atl3Q91YH5 541 aa12.27□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Rbm25B2RY56 838 aaKnown RBP12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Tpd52l1O54818 204 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ciz1Q8VEH2 845 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Tceal9Q9DD24 104 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Swt1Q9DBQ9 907 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Gtf3c3Q3TMP1 882 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Chmp4cQ9D7F7 232 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Rab11fip3Q8CHD8 1047 aa12.26□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ncoa2Q61026 1462 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Rabep1O35551 862 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Fyb1O35601 819 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Cplx2P84086 134 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Glipr1l2Q9CQ35 332 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 BccipQ9CWI3 316 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Prdm16A2A935 1275 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ttll13A4Q9F6 804 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Cfdp1O88271 295 aaKnown RBP12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Rad54l2Q99NG0 1466 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ush1cQ9ES64 910 aa12.25□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Naip1Q9QWK5 1403 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 AampJ3QN89 436 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ccdc47Q9D024 483 aaKnown RBP12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Vps8Q0P5W1 1427 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 ScribQ80U72 1612 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Map3k5O35099 1380 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Tpm3P21107 285 aaKnown RBP12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Taok2Q6ZQ29 1240 aa12.24□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ccdc183A2AJB1 534 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Polr3gQ6NXY9 223 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Utp3Q9JI13 469 aaKnown RBP12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Gm21969J3QJZ1 289 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Q8C5K5 320 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Shroom4Q1W617 1475 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Neurod6P48986 337 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 KinQ8K339 391 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 PnisrA2AJT4 805 aaKnown RBP12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Apaf1O88879 1249 aa12.23□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Zfp444Q3TDV8 331 aaKnown RBP12.22□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Top2aQ01320 1528 aaKnown RBP12.22□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ppp2r1aQ76MZ3 589 aa12.22□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ift140E9PY46 1464 aa12.22□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Nek4Q9Z1J2 792 aa12.22□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Ubap1lG3UW59 384 aa12.21□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Krt82Q99M74 516 aa12.21□□□□□ -0.45
Smarca1-202ENSMUST00000088973 Bicd2Q921C5 820 aa12.21□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Rnf20Q5DTM8 973 aa12.21□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cetn4Q8K4K1 168 aa12.21□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Plekhh1Q80TI1 1356 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Bcl2l13P59017 434 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 TatQ8QZR1 454 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Sv2bQ8BG39 683 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Smc3Q9CW03 1217 aaKnown RBP12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 FanciQ8K368 1330 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Ttll5Q8CHB8 1328 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Iqgap2Q3UQ44 1575 aa12.2□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Nol12Q8BG17 217 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Hmox1P14901 289 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cplx1P63040 134 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Gprasp1Q5U4C1 1347 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cd109Q8R422 1442 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cux1P53564 1515 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Vps53Q8CCB4 832 aa12.19□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Ddx11Q6AXC6 880 aa12.18□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Gripap1Q8VD04 806 aa12.18□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Gsdma3Q5Y4Y6 464 aa12.18□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Dhx16G3X8X0 1044 aaKnown RBP12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 PogkQ80TC5 607 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cavin4A2AMM0 362 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 SkilQ60665 675 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Arhgap31A6X8Z5 1425 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Stk11ipQ3TAA7 1072 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Erc2Q6PH08 957 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Kif4P33174 1231 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Evc2Q8K1G2 1220 aa12.17□□□□□ -0.46
Smarca1-202ENSMUST00000088973 CrcpO35427 148 aa12.16□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Isy1Q69ZQ2 285 aaKnown RBP12.16□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Srek1Q8BZX4 494 aaKnown RBP12.16□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Rab3gap2Q8BMG7 1366 aa12.16□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Gm10471E9Q1C7 252 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Tomm22Q9CPQ3 142 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Dhx9O70133 1380 aaKnown RBP12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 FosbP13346 338 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Kri1Q8VDQ9 704 aaKnown RBP12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Myom3A2ABU4 1439 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Tpm1P58771 284 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Gabpb2P81069 414 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 BcanQ61361 883 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Mad1l1Q9WTX8 717 aaKnown RBP12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Cyp46a1Q9WVK8 500 aa12.15□□□□□ -0.46
Smarca1-202ENSMUST00000088973 Samd1D3YXK1 519 aa12.14□□□□□ -0.47
Smarca1-202ENSMUST00000088973 PhaxQ9JJT9 385 aaKnown RBP12.14□□□□□ -0.47
Smarca1-202ENSMUST00000088973 Arap1Q4LDD4 1452 aa12.14□□□□□ -0.47
Smarca1-202ENSMUST00000088973 Urb2E9Q7L1 1524 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms