RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Gnai3Q9DC51 354 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc171E9Q1U1 1324 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Dhx29Q6PGC1 1365 aaKnown RBP7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ift140E9PY46 1464 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Zscan10Q3URR7 782 aa7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cchcr1Q8K2I2 770 aa7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Dhx8A2A4P0 1244 aaKnown RBP7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 EzrP26040 586 aaKnown RBP7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Slc4a10Q5DTL9 1118 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Utp14aQ640M1 767 aaKnown RBP7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Erc2Q6PH08 957 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gtf3c5Q8R2T8 520 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Map3k1P53349 1493 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gtf3c3Q3TMP1 882 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ggt6Q6PDE7 497 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gripap1Q8VD04 806 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Hap1O35668 628 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Sox12Q04890 314 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Plin1Q8CGN5 517 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Efcab5A0JP43 1406 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 CrebrfQ8CDG5 640 aaKnown RBP7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 FanciQ8K368 1330 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Prkrip1Q9CWV6 186 aaKnown RBP7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Nolc1E9Q5C9 702 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Taf3Q5HZG4 932 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Inpp5dQ9ES52 1191 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 PnisrA2AJT4 805 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gabpb2P81069 414 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Dusp9Q7TNL7 452 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Kri1Q8VDQ9 704 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 NrkQ9R0G8 1455 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Rec8Q8C5S7 591 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Sh3bgrQ9WUZ7 214 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ftsj3Q9DBE9 838 aaKnown RBP7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 ScribQ80U72 1612 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Cc2d2aQ8CFW7 1633 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gpatch3Q8BIY1 525 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Soga1E1U8D0 1418 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Psma5Q9Z2U1 241 aaKnown RBP7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ubxn4Q8VCH8 506 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Swt1Q9DBQ9 907 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Shq1Q7TMX5 569 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Podxl2Q8CAE9 603 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 UvssaQ9D479 717 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 ChgaP26339 463 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Chmp7Q8R1T1 451 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gsto1O09131 240 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Smc3Q9CW03 1217 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Znhit6Q3UFB2 460 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gcom1E9PZ54 550 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 MyzapQ3UIJ9 466 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ints3Q7TPD0 1041 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 AnlnQ8K298 1121 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ak7Q9D2H2 614 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 NexnQ7TPW1 607 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 1700010I14RikQ7TPG0 532 aa7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Isy1Q69ZQ2 285 aaKnown RBP7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Utp3Q9JI13 469 aaKnown RBP7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Kif3cO35066 796 aa7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 AppP12023 770 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cabp4Q8VHC5 271 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Arhgap5P97393 1501 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Gpatch11Q3UFS4 262 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Tubb6Q922F4 447 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rab3gap2Q8BMG7 1366 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Jph4Q80WT0 628 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Pak3Q61036 559 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ric3Q8BPM6 367 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 NaspQ99MD9 773 aaKnown RBP7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cyp46a1Q9WVK8 500 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Wdr78E9PYY5 807 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Bicd2Q921C5 820 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cplx1P63040 134 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Lrrcc1Q69ZB0 1026 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ccdc30Q8BVF4 654 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Myom3A2ABU4 1439 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ppp2r3aB2RXC8 1150 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Arhgef5E9Q7D5 1581 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 PdcQ9QW08 244 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Pibf1E9Q6K3 756 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Vps53Q8CCB4 832 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Trim29Q8R2Q0 587 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Chaf1aQ9QWF0 911 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cfap99A0A140LIX9 648 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Triml2E9PW10 424 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Noc3lQ8VI84 807 aaKnown RBP7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Usp16Q99LG0 825 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Gnl3lQ6PGG6 577 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rbm25B2RY56 838 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ppm1eQ80TL0 749 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Il16O54824 1322 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Necab1Q8BG18 352 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rufy1Q8BIJ7 712 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ccdc141E9Q8Q6 1531 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Zkscan2G3X952 960 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cwc15Q9JHS9 229 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 AqrQ8CFQ3 1481 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ncapd3Q6ZQK0 1506 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Tomm22Q9CPQ3 142 aa7.86□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ttll5Q8CHB8 1328 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms