RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Gnai3Q9DC51 354 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ccdc171E9Q1U1 1324 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Dhx29Q6PGC1 1365 aaKnown RBP7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Ift140E9PY46 1464 aa7.97□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Zscan10Q3URR7 782 aa7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Cchcr1Q8K2I2 770 aa7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 Dhx8A2A4P0 1244 aaKnown RBP7.96□□□□□ -1.13
Scn1a-201ENSMUST00000077489 EzrP26040 586 aaKnown RBP7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Slc4a10Q5DTL9 1118 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Utp14aQ640M1 767 aaKnown RBP7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Erc2Q6PH08 957 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gtf3c5Q8R2T8 520 aa7.96□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Map3k1P53349 1493 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gtf3c3Q3TMP1 882 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ggt6Q6PDE7 497 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gripap1Q8VD04 806 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Hap1O35668 628 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Sox12Q04890 314 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Plin1Q8CGN5 517 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Efcab5A0JP43 1406 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 CrebrfQ8CDG5 640 aaKnown RBP7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 FanciQ8K368 1330 aa7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Prkrip1Q9CWV6 186 aaKnown RBP7.95□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Nolc1E9Q5C9 702 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Taf3Q5HZG4 932 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Inpp5dQ9ES52 1191 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 PnisrA2AJT4 805 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gabpb2P81069 414 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Dusp9Q7TNL7 452 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Kri1Q8VDQ9 704 aaKnown RBP7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 NrkQ9R0G8 1455 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Rec8Q8C5S7 591 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Sh3bgrQ9WUZ7 214 aa7.94□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ftsj3Q9DBE9 838 aaKnown RBP7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 ScribQ80U72 1612 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Cc2d2aQ8CFW7 1633 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gpatch3Q8BIY1 525 aa7.93□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Soga1E1U8D0 1418 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Psma5Q9Z2U1 241 aaKnown RBP7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ubxn4Q8VCH8 506 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Swt1Q9DBQ9 907 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Shq1Q7TMX5 569 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Podxl2Q8CAE9 603 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 UvssaQ9D479 717 aa7.92□□□□□ -1.14
Scn1a-201ENSMUST00000077489 ChgaP26339 463 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Chmp7Q8R1T1 451 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gsto1O09131 240 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Smc3Q9CW03 1217 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Znhit6Q3UFB2 460 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Gcom1E9PZ54 550 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 MyzapQ3UIJ9 466 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ints3Q7TPD0 1041 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 AnlnQ8K298 1121 aaKnown RBP7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Ak7Q9D2H2 614 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 NexnQ7TPW1 607 aa7.91□□□□□ -1.14
Scn1a-201ENSMUST00000077489 1700010I14RikQ7TPG0 532 aa7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Isy1Q69ZQ2 285 aaKnown RBP7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Utp3Q9JI13 469 aaKnown RBP7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 Kif3cO35066 796 aa7.9□□□□□ -1.14
Scn1a-201ENSMUST00000077489 AppP12023 770 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cabp4Q8VHC5 271 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Arhgap5P97393 1501 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Gpatch11Q3UFS4 262 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Tubb6Q922F4 447 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rab3gap2Q8BMG7 1366 aa7.9□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Jph4Q80WT0 628 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Pak3Q61036 559 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ric3Q8BPM6 367 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 NaspQ99MD9 773 aaKnown RBP7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cyp46a1Q9WVK8 500 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Wdr78E9PYY5 807 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Bicd2Q921C5 820 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cplx1P63040 134 aa7.89□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Lrrcc1Q69ZB0 1026 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ccdc30Q8BVF4 654 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Myom3A2ABU4 1439 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ppp2r3aB2RXC8 1150 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Arhgef5E9Q7D5 1581 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 PdcQ9QW08 244 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Pibf1E9Q6K3 756 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Vps53Q8CCB4 832 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Trim29Q8R2Q0 587 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Chaf1aQ9QWF0 911 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cfap99A0A140LIX9 648 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Triml2E9PW10 424 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Noc3lQ8VI84 807 aaKnown RBP7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Usp16Q99LG0 825 aa7.88□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Gnl3lQ6PGG6 577 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rbm25B2RY56 838 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ppm1eQ80TL0 749 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Il16O54824 1322 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Necab1Q8BG18 352 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Rufy1Q8BIJ7 712 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ccdc141E9Q8Q6 1531 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Zkscan2G3X952 960 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Cwc15Q9JHS9 229 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 AqrQ8CFQ3 1481 aaKnown RBP7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ncapd3Q6ZQK0 1506 aa7.87□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Tomm22Q9CPQ3 142 aa7.86□□□□□ -1.15
Scn1a-201ENSMUST00000077489 Ttll5Q8CHB8 1328 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 176.2 ms