RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Tdrd9Q14BI7 1383 aa21.19■□□□□ 0.98
Usp48-201ENSMUST00000055131 Krt82Q99M74 516 aa21.19■□□□□ 0.98
Usp48-201ENSMUST00000055131 Ric3Q8BPM6 367 aa21.18■□□□□ 0.98
Usp48-201ENSMUST00000055131 Drc7Q6V3W6 876 aa21.18■□□□□ 0.98
Usp48-201ENSMUST00000055131 Ccdc30Q8BVF4 654 aa21.18■□□□□ 0.98
Usp48-201ENSMUST00000055131 Jph4Q80WT0 628 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Rab11fip3Q8CHD8 1047 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Nectin2P32507 530 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Pank1Q8K4K6 548 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Samd1D3YXK1 519 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Chmp7Q8R1T1 451 aa21.17■□□□□ 0.98
Usp48-201ENSMUST00000055131 Gabpb2P81069 414 aa21.16■□□□□ 0.98
Usp48-201ENSMUST00000055131 Srek1Q8BZX4 494 aaKnown RBP21.16■□□□□ 0.98
Usp48-201ENSMUST00000055131 Glipr1l2Q9CQ35 332 aa21.16■□□□□ 0.98
Usp48-201ENSMUST00000055131 Kif16bB1AVY7 1312 aa21.15■□□□□ 0.98
Usp48-201ENSMUST00000055131 Nutm1Q8BHP2 1126 aa21.15■□□□□ 0.98
Usp48-201ENSMUST00000055131 ErbinQ80TH2 1402 aa21.15■□□□□ 0.98
Usp48-201ENSMUST00000055131 Ddx11Q6AXC6 880 aa21.15■□□□□ 0.98
Usp48-201ENSMUST00000055131 Bicd2Q921C5 820 aa21.15■□□□□ 0.98
Usp48-201ENSMUST00000055131 Arid4aF8VPQ2 1261 aaKnown RBP21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 Rabep1O35551 862 aa21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 FosbP13346 338 aa21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 Q9D2X8 372 aa21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 Neurod6P48986 337 aa21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 Tpm1P58771 284 aa21.14■□□□□ 0.97
Usp48-201ENSMUST00000055131 Ciz1Q8VEH2 845 aa21.13■□□□□ 0.97
Usp48-201ENSMUST00000055131 Hmox1P14901 289 aa21.13■□□□□ 0.97
Usp48-201ENSMUST00000055131 Cplx2P84086 134 aa21.13■□□□□ 0.97
Usp48-201ENSMUST00000055131 Tpm2P58774 284 aa21.12■□□□□ 0.97
Usp48-201ENSMUST00000055131 Tpm4Q6IRU2 248 aa21.12■□□□□ 0.97
Usp48-201ENSMUST00000055131 Dhx16G3X8X0 1044 aaKnown RBP21.12■□□□□ 0.97
Usp48-201ENSMUST00000055131 Kif4P33174 1231 aa21.12■□□□□ 0.97
Usp48-201ENSMUST00000055131 Shroom4Q1W617 1475 aa21.12■□□□□ 0.97
Usp48-201ENSMUST00000055131 Gripap1Q8VD04 806 aa21.11■□□□□ 0.97
Usp48-201ENSMUST00000055131 KarsQ99MN1 595 aaKnown RBP21.11■□□□□ 0.97
Usp48-201ENSMUST00000055131 Rad54l2Q99NG0 1466 aa21.11■□□□□ 0.97
Usp48-201ENSMUST00000055131 Rbm25B2RY56 838 aaKnown RBP21.11■□□□□ 0.97
Usp48-201ENSMUST00000055131 Rec8Q8C5S7 591 aa21.1■□□□□ 0.97
Usp48-201ENSMUST00000055131 Ppm1fQ8CGA0 452 aa21.1■□□□□ 0.97
Usp48-201ENSMUST00000055131 Smc3Q9CW03 1217 aaKnown RBP21.1■□□□□ 0.97
Usp48-201ENSMUST00000055131 Cplx1P63040 134 aa21.09■□□□□ 0.97
Usp48-201ENSMUST00000055131 Gnai1B2RSH2 354 aa21.09■□□□□ 0.97
Usp48-201ENSMUST00000055131 Gnai3Q9DC51 354 aa21.09■□□□□ 0.97
Usp48-201ENSMUST00000055131 Rnf20Q5DTM8 973 aa21.09■□□□□ 0.97
Usp48-201ENSMUST00000055131 Evc2Q8K1G2 1220 aa21.09■□□□□ 0.97
Usp48-201ENSMUST00000055131 Urb2E9Q7L1 1524 aaKnown RBP21.08■□□□□ 0.97
Usp48-201ENSMUST00000055131 Gsto1O09131 240 aa21.08■□□□□ 0.97
Usp48-201ENSMUST00000055131 Fyb1O35601 819 aa21.08■□□□□ 0.97
Usp48-201ENSMUST00000055131 Q8C5K5 320 aa21.07■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ftsj3Q9DBE9 838 aaKnown RBP21.07■□□□□ 0.96
Usp48-201ENSMUST00000055131 Wdr78E9PYY5 807 aa21.07■□□□□ 0.96
Usp48-201ENSMUST00000055131 Swt1Q9DBQ9 907 aa21.07■□□□□ 0.96
Usp48-201ENSMUST00000055131 Bcl2l13P59017 434 aa21.06■□□□□ 0.96
Usp48-201ENSMUST00000055131 PogkQ80TC5 607 aa21.06■□□□□ 0.96
Usp48-201ENSMUST00000055131 Noc3lQ8VI84 807 aaKnown RBP21.06■□□□□ 0.96
Usp48-201ENSMUST00000055131 Fam193aQ8CGI1 1231 aaKnown RBP21.06■□□□□ 0.96
Usp48-201ENSMUST00000055131 Mad1l1Q9WTX8 717 aaKnown RBP21.05■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ncoa2Q61026 1462 aa21.05■□□□□ 0.96
Usp48-201ENSMUST00000055131 Nol12Q8BG17 217 aa21.05■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ccp110Q7TSH4 1004 aa21.05■□□□□ 0.96
Usp48-201ENSMUST00000055131 AampJ3QN89 436 aa21.04■□□□□ 0.96
Usp48-201ENSMUST00000055131 Cfdp1O88271 295 aaKnown RBP21.04■□□□□ 0.96
Usp48-201ENSMUST00000055131 Nek4Q9Z1J2 792 aa21.04■□□□□ 0.96
Usp48-201ENSMUST00000055131 Zfp644E9QA22 1323 aa21.04■□□□□ 0.96
Usp48-201ENSMUST00000055131 Pip4k2bQ80XI4 416 aa21.04■□□□□ 0.96
Usp48-201ENSMUST00000055131 Atl3Q91YH5 541 aa21.03■□□□□ 0.96
Usp48-201ENSMUST00000055131 BcanQ61361 883 aa21.03■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ttll5Q8CHB8 1328 aa21.03■□□□□ 0.96
Usp48-201ENSMUST00000055131 Hnrnpul1Q8VDM6 859 aaKnown RBP21.03■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ipo7Q9EPL8 1038 aaKnown RBP21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ccdc183A2AJB1 534 aa21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Puf60Q3UEB3 564 aaKnown RBP21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Ankrd36D3Z4K0 1415 aa21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 CrcpO35427 148 aa21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Map7d2A2AG50 781 aa21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Erc2Q6PH08 957 aa21.02■□□□□ 0.96
Usp48-201ENSMUST00000055131 Sv2bQ8BG39 683 aa21.01■□□□□ 0.95
Usp48-201ENSMUST00000055131 Prkrip1Q9CWV6 186 aaKnown RBP21.01■□□□□ 0.95
Usp48-201ENSMUST00000055131 Q7TT23 1179 aa21.01■□□□□ 0.95
Usp48-201ENSMUST00000055131 PhaxQ9JJT9 385 aaKnown RBP21.01■□□□□ 0.95
Usp48-201ENSMUST00000055131 Gsdma3Q5Y4Y6 464 aa21.01■□□□□ 0.95
Usp48-201ENSMUST00000055131 A0A1L1SQF0 893 aa21■□□□□ 0.95
Usp48-201ENSMUST00000055131 Fbxo2Q80UW2 297 aa21■□□□□ 0.95
Usp48-201ENSMUST00000055131 Cyp46a1Q9WVK8 500 aa21■□□□□ 0.95
Usp48-201ENSMUST00000055131 Dixdc1Q80Y83 711 aa20.99■□□□□ 0.95
Usp48-201ENSMUST00000055131 Bcl11bQ99PV8 884 aa20.99■□□□□ 0.95
Usp48-201ENSMUST00000055131 Stk3Q9JI10 497 aa20.99■□□□□ 0.95
Usp48-201ENSMUST00000055131 Odf2A3KGV1 830 aaKnown RBP20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Ccdc43Q9CR29 222 aaKnown RBP20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Cux1P53564 1515 aa20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Ttll13A4Q9F6 804 aa20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Nsd2Q8BVE8 1365 aa20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Gpatch3Q8BIY1 525 aa20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Taf3Q5HZG4 932 aa20.98■□□□□ 0.95
Usp48-201ENSMUST00000055131 Usp48Q3V0C5 1052 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Cetn4Q8K4K1 168 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Chrna2Q91X60 512 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Q9D9H8 365 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 A0A0U1RNP2 1173 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Pde4cQ3UEI1 686 aa20.97■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms