RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Slain2Q8CI08 581 aa9.43□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Hspa1lP16627 641 aa9.43□□□□□ -0.9
Bdnf-201ENSMUST00000053317 4930407I10RikD3Z5T8 1512 aa9.43□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Ddx17Q501J6 650 aaKnown RBP9.43□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Fbln2P37889 1221 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Ercc6l2Q9JIM3 1537 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 AlkP97793 1621 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Ahdc1Q6PAL7 1594 aaKnown RBP9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Q3UJC8 639 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Dmrt2Q8BG36 561 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Skint5A7XUY5 1461 aa9.42□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Aebp2Q9Z248 504 aaKnown RBP9.41□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Slc5a4bQ91ZP4 660 aa9.4□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Kif14L0N7N1 1674 aaKnown RBP9.4□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Birc3O08863 600 aa9.4□□□□□ -0.91
Bdnf-201ENSMUST00000053317 AatkQ80YE4 1365 aa9.4□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Kdm5cP41230 1554 aa9.4□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Ankrd36D3Z4K0 1415 aa9.4□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Plin1Q8CGN5 517 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Rock2P70336 1388 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 AU022751B1B0V2 589 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Fyb1O35601 819 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Stra8P70278 393 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Talpid3E9PV87 1520 aa9.39□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Neurl4Q5NCX5 1563 aa9.38□□□□□ -0.91
Bdnf-201ENSMUST00000053317 CltcQ68FD5 1675 aaKnown RBP9.38□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Kif1bQ60575 1816 aaKnown RBP9.38□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Slc4a1apE9PX68 744 aa9.38□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Nlrp6Q91WS2 869 aa9.38□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Cdk19Q8BWD8 501 aa9.37□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Cabp4Q8VHC5 271 aa9.37□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Sirt1Q923E4 737 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 CenpjQ569L8 1344 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Qtrt2B8ZXI1 415 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Dapk1Q80YE7 1442 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Myom2Q14BI5 1463 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Anp32bQ9EST5 272 aaKnown RBP9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Tnnt3Q9QZ47 272 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Ttll13A4Q9F6 804 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Alpk3Q924C5 1678 aa9.36□□□□□ -0.91
Bdnf-201ENSMUST00000053317 PtprgQ05909 1442 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Gm21190A0A0G2JGJ6 266 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Slc52a2Q9D8F3 450 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Robo2Q7TPD3 1470 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Edc4Q3UJB9 1406 aaKnown RBP9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Gsto1O09131 240 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 IghaA0A0A6YXW6 389 aa9.35□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Cdc42bpgQ80UW5 1551 aa9.34□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Dcaf11Q91VU6 549 aa9.34□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Supt6hQ62383 1726 aaKnown RBP9.34□□□□□ -0.91
Bdnf-201ENSMUST00000053317 Irx6Q9ER75 438 aa9.34□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Abca6Q8K441 1624 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 1700123L14RikQ3V2K7 440 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Farp2Q91VS8 1065 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Efcab6Q6P1E8 1516 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Hecw1Q8K4P8 1604 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Naip7Q9JIB3 1402 aa9.33□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Mast1Q9R1L5 1570 aa9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Pak3Q61036 559 aa9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Plch2A2AP18 1501 aa9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 HdgfP51859 237 aaKnown RBP9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Aplp2Q06335 707 aa9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Zmym4A2A791 1549 aaKnown RBP9.32□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Scaf11E9PZM7 1456 aaKnown RBP9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Kiaa0556Q8C753 1610 aa9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Cwc22Q8C5N3 908 aaKnown RBP9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Sugp2Q8CH09 1067 aa9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Abcc6Q9R1S7 1498 aa9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Sf3b2Q3UJB0 878 aaKnown RBP9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Bcl11aQ9QYE3 773 aa9.31□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Kif7B7ZNG0 1348 aa9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Uggt2E9Q4X2 1504 aa9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Rtl5Q5DTT4 599 aa9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Xrn1P97789 1719 aaKnown RBP9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Fhod3Q76LL6 1578 aa9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Smim5Q8BT42 78 aa9.3□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Eno4Q8C042 619 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Inpp5dQ9ES52 1191 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Knl1Q66JQ7 1612 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Asxl1P59598 1514 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Rangap1P46061 589 aaKnown RBP9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Idi1P58044 227 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Eif5bQ05D44 1216 aaKnown RBP9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Adgrb3Q80ZF8 1522 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 ShprhQ7TPQ3 1674 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Pank3Q8R2W9 370 aa9.29□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Pdcd11Q6NS46 1862 aaKnown RBP9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 NrdcQ8BHG1 1161 aa9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Anks4bQ8K3X6 423 aa9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Nyap1Q6PFX7 833 aa9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Stard8Q8K031 1019 aa9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 Tarbp1E9Q368 1579 aa9.28□□□□□ -0.92
Bdnf-201ENSMUST00000053317 PzpQ61838 1495 aa9.27□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Rprd2Q6NXI6 1469 aaKnown RBP9.27□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Q8BT18 775 aa9.27□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Dixdc1Q80Y83 711 aa9.27□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Senp3Q9EP97 568 aaKnown RBP9.27□□□□□ -0.93
Bdnf-201ENSMUST00000053317 MpndQ3TV65 487 aa9.26□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Prex1Q69ZK0 1650 aa9.26□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Gm21698A0A087WQP8 267 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms