RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Dip2bQ3UH60 1574 aa12.89□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Rims1Q99NE5 1463 aa12.89□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Hfm1D3Z4R1 1434 aa12.89□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Rgl3Q3UYI5 709 aa12.88□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Polr3aB2RXC6 1390 aa12.88□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Kdm5aQ3UXZ9 1690 aa12.88□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 AatkQ80YE4 1365 aa12.87□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Chd2E9PZM4 1827 aaKnown RBP12.87□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Skint5A7XUY5 1461 aa12.87□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 PtprmP28828 1452 aa12.87□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 RalgapbQ8BQZ4 1484 aa12.87□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Afap1Q80YS6 731 aa12.86□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 ErbinQ80TH2 1402 aa12.85□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Ercc6l2Q9JIM3 1537 aa12.84□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Myo3aQ8K3H5 1613 aa12.84□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Ift172Q6VH22 1749 aa12.83□□□□□ -0.35
Ckap2l-201ENSMUST00000052708 Setd1aE9PYH6 1716 aa12.83□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Dapk1Q80YE7 1442 aa12.82□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Zc3h13E9Q784 1729 aaKnown RBP12.81□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Gm13697A2AK42 830 aa12.8□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 DnmbpQ6TXD4 1580 aa12.8□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Arhgef28P97433 1693 aa12.79□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 MaddQ80U28 1577 aa12.79□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Tubgcp6G5E8P0 1769 aa12.79□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 PplQ9R269 1755 aa12.78□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Erich6D3Z6S9 713 aa12.78□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Ncoa1P70365 1447 aa12.78□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 AU022751B1B0V2 589 aa12.77□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Grwd1Q810D6 446 aaKnown RBP12.77□□□□□ -0.36
Ckap2l-201ENSMUST00000052708 Naip7Q9JIB3 1402 aa12.77□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 ClspnQ80YR7 1315 aa12.77□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Pola1P33609 1465 aa12.76□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Stk24Q99KH8 431 aa12.76□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Sin3aQ60520 1274 aaKnown RBP12.76□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Rsph4aQ8BYM7 716 aa12.76□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Prrc2bQ7TPM1 1486 aaKnown RBP12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 4930407I10RikD3Z5T8 1512 aa12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Eif2ak4Q9QZ05 1648 aa12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Hdac5Q9Z2V6 1113 aa12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Mroh3A0A1D5RM54 893 aa12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Ifit1bl1D3Z6F0 470 aa12.75□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Topaz1E5FYH1 1653 aa12.74□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Itsn2Q9Z0R6 1659 aa12.74□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Wdr66E9Q743 1299 aa12.74□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Nop58Q6DFW4 536 aaKnown RBP12.74□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 DiexfQ8BTT6 772 aaKnown RBP12.74□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Rundc1Q0VDN7 615 aa12.73□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Plppr3Q7TPB0 716 aa12.73□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Gemin5Q8BX17 1502 aaKnown RBP12.73□□□□□ -0.37
Ckap2l-201ENSMUST00000052708 Bcl9Q9D219 1425 aa12.7□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Card11Q8CIS0 1159 aa12.68□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Dip2aQ8BWT5 1523 aa12.68□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Lrrc7Q80TE7 1490 aa12.67□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Nphp4P59240 1425 aa12.67□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Slit3Q9WVB4 1523 aa12.65□□□□□ -0.38
Ckap2l-201ENSMUST00000052708 Cep170bQ80U49 1574 aa12.64□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Abca14E9Q8F8 1683 aa12.64□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 PalldQ9ET54 1408 aa12.63□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Nwd1A6H603 1563 aa12.62□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 IghaA0A0A6YXW6 389 aa12.62□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Kdm2aP59997 1161 aa12.62□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Arap3Q8R5G7 1538 aa12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Bcl11aQ9QYE3 773 aa12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Brwd3A2AHJ4 1799 aa12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Phlpp1Q8CHE4 1687 aa12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Cwc22Q8C5N3 908 aaKnown RBP12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Rock2P70336 1388 aa12.61□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Rimbp3Q3V0F0 1606 aa12.6□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Fan1Q69ZT1 1020 aa12.6□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Safb2Q80YR5 991 aaKnown RBP12.6□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Plekhg5Q66T02 1073 aa12.6□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Usp32F8VPZ3 1604 aa12.59□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Puf60Q3UEB3 564 aaKnown RBP12.59□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Slc52a2Q9D8F3 450 aa12.59□□□□□ -0.39
Ckap2l-201ENSMUST00000052708 Cps1Q8C196 1500 aa12.58□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Lmtk3Q5XJV6 1424 aa12.58□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Mapk8ip2Q9ERE9 830 aa12.57□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Gm20521D3Z5F7 333 aa12.57□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Srpk2O54781 681 aaKnown RBP12.57□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Thsd7aQ69ZU6 1645 aa12.56□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Asxl2Q8BZ32 1370 aa12.56□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Gm38655A0A286YDK6 273 aa12.55□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Usp40Q8BWR4 1235 aa12.55□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 NktrP30415 1453 aa12.55□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Srcin1Q9QWI6 1250 aa12.55□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Scn4aQ9ER60 1841 aa12.54□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Sbno1Q689Z5 1390 aa12.54□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Shq1Q7TMX5 569 aa12.53□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Gm16486A0A1D5RMD1 1434 aa12.53□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Plekhg1F6S200 1446 aa12.53□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Med1Q925J9 1575 aa12.53□□□□□ -0.4
Ckap2l-201ENSMUST00000052708 Scaf11E9PZM7 1456 aaKnown RBP12.52□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 D430041D05RikF6ZGR6 1678 aa12.52□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 MlecQ6ZQI3 291 aaKnown RBP12.51□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Stard8Q8K031 1019 aa12.51□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Q9D9H8 365 aa12.51□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Rims2Q9EQZ7 1530 aa12.51□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Kif20bQ80WE4 1774 aaKnown RBP12.5□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Zbtb4Q5F293 982 aa12.5□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Gtf2e1Q9D0D5 440 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms