RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Map3k5O35099 1380 aa11.15□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Arhgap23Q69ZH9 1483 aa11.15□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Rrp7aQ9D1C9 280 aaKnown RBP11.15□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Itsn1Q9Z0R4 1714 aa11.14□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Myo3aQ8K3H5 1613 aa11.14□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 CltcQ68FD5 1675 aaKnown RBP11.13□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Med14A2ABV5 1459 aaKnown RBP11.13□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 PnisrA2AJT4 805 aaKnown RBP11.13□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Rundc1Q0VDN7 615 aa11.11□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Hdac5Q9Z2V6 1113 aa11.11□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Nphp4P59240 1425 aa11.11□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 PplQ9R269 1755 aa11.1□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Fkbp15Q6P9Q6 1216 aaKnown RBP11.1□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Eif2ak4Q9QZ05 1648 aa11.1□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Kif13aQ9EQW7 1749 aa11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Ptch1Q61115 1434 aa11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Tex14Q7M6U3 1450 aa11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Ttc21bQ0HA38 1315 aa11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Arid4bA2CG63 1314 aaKnown RBP11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 AatkQ80YE4 1365 aa11.09□□□□□ -0.63
Ccdc60-201ENSMUST00000050178 Gm16486A0A1D5RMD1 1434 aa11.08□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Chd2E9PZM4 1827 aaKnown RBP11.08□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Zc3h13E9Q784 1729 aaKnown RBP11.07□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Ube2uB1AUC4 352 aa11.07□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Rgl3Q3UYI5 709 aa11.07□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Card11Q8CIS0 1159 aa11.07□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 KdrP35918 1367 aa11.06□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Ahdc1Q6PAL7 1594 aaKnown RBP11.06□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Slc4a2P13808 1237 aaKnown RBP11.06□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Stra8P70278 393 aa11.05□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Arhgef28P97433 1693 aa11.04□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 PtprmP28828 1452 aa11.04□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Tnnt3Q9QZ47 272 aa11.03□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Lemd3Q9WU40 921 aa11.03□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Aplp2Q06335 707 aa11.03□□□□□ -0.64
Ccdc60-201ENSMUST00000050178 Adgrl1Q80TR1 1466 aa11.02□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Gemin5Q8BX17 1502 aaKnown RBP11.02□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Yeats2Q3TUF7 1407 aa11.02□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Gprasp1Q5U4C1 1347 aa11.02□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Topaz1E5FYH1 1653 aa11.02□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 ErbinQ80TH2 1402 aa11□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Skint5A7XUY5 1461 aa11□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 PrxO55103 1391 aa10.99□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Nrxn1Q9CS84 1514 aa10.99□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Ttc41Q692V3 1318 aa10.99□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Csrnp3P59055 597 aa10.98□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Nwd1A6H603 1563 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Atf7ipQ7TT18 1306 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Stard8Q8K031 1019 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 PalldQ9ET54 1408 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Mink1Q9JM52 1308 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Pcdh10E9PXQ7 1057 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Mapk8ip2Q9ERE9 830 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Rimbp3Q3V0F0 1606 aa10.97□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Exoc6Q8R313 802 aa10.96□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Unc13bQ9Z1N9 1602 aa10.96□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 NktrP30415 1453 aa10.96□□□□□ -0.65
Ccdc60-201ENSMUST00000050178 Kif3bQ61771 747 aa10.96□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Abca14E9Q8F8 1683 aa10.95□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Hnrnpul2Q00PI9 745 aaKnown RBP10.95□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Hfm1D3Z4R1 1434 aa10.95□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 AU022751B1B0V2 589 aa10.95□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Grwd1Q810D6 446 aaKnown RBP10.95□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Lrrc7Q80TE7 1490 aa10.94□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Sall3Q62255 1320 aa10.94□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Arap3Q8R5G7 1538 aa10.94□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Ifit1bl1D3Z6F0 470 aa10.94□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 NpatQ8BMA5 1420 aa10.94□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 1700123L14RikQ3V2K7 440 aa10.93□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Dip2aQ8BWT5 1523 aa10.93□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Med1Q925J9 1575 aa10.93□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Usp32F8VPZ3 1604 aa10.93□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 PzpQ61838 1495 aa10.92□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Mdc1Q5PSV9 1707 aa10.92□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Kank1E9Q238 1360 aa10.91□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Ercc6l2Q9JIM3 1537 aa10.91□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 InsrP15208 1372 aa10.9□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Arid3cA6PWV5 409 aa10.9□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Pik3c2bE9QAN8 1632 aa10.9□□□□□ -0.66
Ccdc60-201ENSMUST00000050178 Plekhg1F6S200 1446 aa10.9□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Mroh3A0A1D5RM54 893 aa10.89□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Wwc2Q6NXJ0 1187 aa10.89□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Slc52a2Q9D8F3 450 aa10.89□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Naip7Q9JIB3 1402 aa10.88□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Cps1Q8C196 1500 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Spef2Q8C9J3 1734 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 4930407I10RikD3Z5T8 1512 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Slit3Q9WVB4 1523 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Znf541Q0GGX2 1363 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Thsd7aQ69ZU6 1645 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Mrs2Q5NCE8 434 aa10.87□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Zscan10Q3URR7 782 aa10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Rsph4aQ8BYM7 716 aa10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Srcin1Q9QWI6 1250 aa10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Prrc2bQ7TPM1 1486 aaKnown RBP10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Cep170bQ80U49 1574 aa10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Kif1aP33173 1695 aa10.86□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Pelp1Q9DBD5 1123 aaKnown RBP10.85□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Col22a1E9Q7P1 1613 aa10.85□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Rab3gap2Q8BMG7 1366 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms