RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 Nsd2Q8BVE8 1365 aa20.45■□□□□ 0.86
Clstn1-201ENSMUST00000039144 ArxO35085 564 aa20.45■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Tarbp1E9Q368 1579 aa20.44■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Ino80Q6ZPV2 1559 aa20.44■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Ncoa1P70365 1447 aa20.44■□□□□ 0.86
Clstn1-201ENSMUST00000039144 NpatQ8BMA5 1420 aa20.44■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Ipo9Q91YE6 1041 aa20.43■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Gm13695A2AK44 830 aa20.43■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Kif3bQ61771 747 aa20.43■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Abca8aQ8K442 1620 aa20.43■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Gtf3c3Q3TMP1 882 aa20.43■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Iqgap1Q9JKF1 1657 aaKnown RBP20.42■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Usp47Q8BY87 1376 aa20.42■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Zbtb7cQ8VCZ7 619 aa20.42■□□□□ 0.86
Clstn1-201ENSMUST00000039144 Ehbp1l1Q99MS7 1716 aa20.41■□□□□ 0.86
Clstn1-201ENSMUST00000039144 L3mbtl2P59178 703 aa20.4■□□□□ 0.86
Clstn1-201ENSMUST00000039144 CltcQ68FD5 1675 aaKnown RBP20.39■□□□□ 0.85
Clstn1-201ENSMUST00000039144 PnisrA2AJT4 805 aaKnown RBP20.39■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Plcd4Q8K3R3 807 aa20.39■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Rock1P70335 1354 aa20.39■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Edc4Q3UJB9 1406 aaKnown RBP20.38■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Pcdh10E9PXQ7 1057 aa20.37■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Tecpr2Q3UH45 1423 aa20.37■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Mbd5B1AYB6 1498 aa20.37■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Arhgap23Q69ZH9 1483 aa20.36■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Talpid3E9PV87 1520 aa20.35■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Ofd1Q80Z25 1017 aa20.34■□□□□ 0.85
Clstn1-201ENSMUST00000039144 Knl1Q66JQ7 1612 aa20.33■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Uggt1Q6P5E4 1551 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Adgrb3Q80ZF8 1522 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Ttc21bQ0HA38 1315 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Myom2Q14BI5 1463 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Dnajc5gQ8C632 165 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Tcerg1Q8CGF7 1100 aaKnown RBP20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 ChgaP26339 463 aaKnown RBP20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Rad21Q61550 635 aaKnown RBP20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Efcab6Q6P1E8 1516 aa20.31■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Hsp90aa1P07901 733 aaKnown RBP20.29■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Iqcf3Q9D498 203 aa20.29■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Irx3P81067 507 aa20.28■□□□□ 0.84
Clstn1-201ENSMUST00000039144 Adamts13Q769J6 1426 aa20.26■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Alpk3Q924C5 1678 aa20.25■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Kdm5aQ3UXZ9 1690 aa20.24■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Abcc6Q9R1S7 1498 aa20.23■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Erbb3Q61526 1339 aa20.23■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Tulp4Q9JIL5 1547 aa20.23■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Kif13aQ9EQW7 1749 aa20.23■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Fgd1P52734 960 aa20.22■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Cpsf1Q9EPU4 1441 aaKnown RBP20.22■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Cep152A2AUM9 1736 aaKnown RBP20.21■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Ahdc1Q6PAL7 1594 aaKnown RBP20.21■□□□□ 0.83
Clstn1-201ENSMUST00000039144 Myom1Q62234 1667 aaKnown RBP20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Cdk13Q69ZA1 1511 aaKnown RBP20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Rsph4aQ8BYM7 716 aa20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Itsn1Q9Z0R4 1714 aa20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Med14A2ABV5 1459 aaKnown RBP20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Mug2P28666 1451 aa20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Hfm1D3Z4R1 1434 aa20.2■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Mroh1E0CZ22 1640 aa20.19■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Plxnc1Q9QZC2 1574 aa20.19■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Dip2bQ3UH60 1574 aa20.17■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Prdm10Q3UTQ7 1184 aa20.17■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Dbr1Q923B1 550 aa20.16■□□□□ 0.82
Clstn1-201ENSMUST00000039144 B4galnt3Q6L8S8 986 aa20.15■□□□□ 0.82
Clstn1-201ENSMUST00000039144 Polr3aB2RXC6 1390 aa20.15■□□□□ 0.82
Clstn1-201ENSMUST00000039144 ErbinQ80TH2 1402 aa20.14■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Chd2E9PZM4 1827 aaKnown RBP20.14■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Rims1Q99NE5 1463 aa20.14■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Cdk5rap2Q8K389 1822 aa20.13■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Ccdc9Q8VC31 543 aaKnown RBP20.13■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Skint5A7XUY5 1461 aa20.13■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Sipa1l1Q8C0T5 1782 aa20.13■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Afap1Q80YS6 731 aa20.12■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Rgl3Q3UYI5 709 aa20.1■□□□□ 0.81
Clstn1-201ENSMUST00000039144 AatkQ80YE4 1365 aa20.1■□□□□ 0.81
Clstn1-201ENSMUST00000039144 RalgapbQ8BQZ4 1484 aa20.09■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Zc3h13E9Q784 1729 aaKnown RBP20.09■□□□□ 0.81
Clstn1-201ENSMUST00000039144 Apbb1Q9QXJ1 710 aa20.07■□□□□ 0.8
Clstn1-201ENSMUST00000039144 PtprmP28828 1452 aa20.06■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Sall3Q62255 1320 aa20.05■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Setd1aE9PYH6 1716 aa20.04■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Plekhg5Q66T02 1073 aa20.04■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Ercc6l2Q9JIM3 1537 aa20.03■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Kank1E9Q238 1360 aa20.03■□□□□ 0.8
Clstn1-201ENSMUST00000039144 PplQ9R269 1755 aa20.03■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Ift172Q6VH22 1749 aa20.03■□□□□ 0.8
Clstn1-201ENSMUST00000039144 NeflP08551 543 aa20.02■□□□□ 0.8
Clstn1-201ENSMUST00000039144 Dapk1Q80YE7 1442 aa20.02■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Myo3aQ8K3H5 1613 aa20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Rundc1Q0VDN7 615 aa20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 MaddQ80U28 1577 aa20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Grwd1Q810D6 446 aaKnown RBP20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Spryd3E9Q9B3 442 aa20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Zfp444Q3TDV8 331 aaKnown RBP20.01■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Eif2ak4Q9QZ05 1648 aa20■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Erich6D3Z6S9 713 aa20■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Arhgef28P97433 1693 aa19.99■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Nkx1-2P42580 305 aa19.99■□□□□ 0.79
Clstn1-201ENSMUST00000039144 Gemin5Q8BX17 1502 aaKnown RBP19.99■□□□□ 0.79
Clstn1-201ENSMUST00000039144 DnmbpQ6TXD4 1580 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms