RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 Gm35339A0A140LHH9 1649 aa30.84■■■□□ 2.53
Clstn1-201ENSMUST00000039144 NischQ80TM9 1593 aa30.43■■■□□ 2.46
Clstn1-201ENSMUST00000039144 Abcc9P70170 1546 aa29.63■■■□□ 2.33
Clstn1-201ENSMUST00000039144 Abcc8B2RUS7 1588 aa29.27■■■□□ 2.28
Clstn1-201ENSMUST00000039144 ScribQ80U72 1612 aa27.89■■■□□ 2.05
Clstn1-201ENSMUST00000039144 Dcaf1Q80TR8 1506 aa27.24■■□□□ 1.95
Clstn1-201ENSMUST00000039144 Kdm5dQ62240 1548 aa27.04■■□□□ 1.92
Clstn1-201ENSMUST00000039144 NacadQ5SWP3 1504 aa26.96■■□□□ 1.91
Clstn1-201ENSMUST00000039144 Ccdc180J3QNE4 1664 aa26.68■■□□□ 1.86
Clstn1-201ENSMUST00000039144 Rb1cc1Q9ESK9 1588 aa26.62■■□□□ 1.85
Clstn1-201ENSMUST00000039144 Rhox8Q6VSS7 320 aa26.51■■□□□ 1.83
Clstn1-201ENSMUST00000039144 Sycp2Q9CUU3 1500 aa26.43■■□□□ 1.82
Clstn1-201ENSMUST00000039144 Baz1aO88379 1555 aa26.31■■□□□ 1.8
Clstn1-201ENSMUST00000039144 Crybg2B7ZCC2 1516 aa26.13■■□□□ 1.77
Clstn1-201ENSMUST00000039144 Rtl1Q7M732 1744 aa26.04■■□□□ 1.76
Clstn1-201ENSMUST00000039144 BicraF8VPZ9 1578 aa26.01■■□□□ 1.75
Clstn1-201ENSMUST00000039144 Ehmt2Q9Z148 1263 aaKnown RBP25.71■■□□□ 1.71
Clstn1-201ENSMUST00000039144 Smarca2Q6DIC0 1577 aa25.67■■□□□ 1.7
Clstn1-201ENSMUST00000039144 Zcchc6Q5BLK4 1491 aaKnown RBP25.56■■□□□ 1.68
Clstn1-201ENSMUST00000039144 Rpgrip1Q9EPQ2 1331 aa25.55■■□□□ 1.68
Clstn1-201ENSMUST00000039144 Cecr2E9Q2Z1 1453 aa25.12■■□□□ 1.61
Clstn1-201ENSMUST00000039144 Acin1Q9JIX8 1338 aaKnown RBP25.1■■□□□ 1.61
Clstn1-201ENSMUST00000039144 Smarca4Q3TKT4 1613 aaKnown RBP25.08■■□□□ 1.61
Clstn1-201ENSMUST00000039144 Pds5bQ4VA53 1446 aaKnown RBP24.95■■□□□ 1.58
Clstn1-201ENSMUST00000039144 Atad2bE9Q166 1460 aaKnown RBP24.9■■□□□ 1.58
Clstn1-201ENSMUST00000039144 Iqgap2Q3UQ44 1575 aa24.82■■□□□ 1.56
Clstn1-201ENSMUST00000039144 Cttnbp2B9EJA2 1648 aa24.8■■□□□ 1.56
Clstn1-201ENSMUST00000039144 Synj1Q8CHC4 1574 aa24.8■■□□□ 1.56
Clstn1-201ENSMUST00000039144 Brd4Q9ESU6 1400 aaKnown RBP24.78■■□□□ 1.56
Clstn1-201ENSMUST00000039144 Ccdc136Q3TVA9 1136 aa24.73■■□□□ 1.55
Clstn1-201ENSMUST00000039144 CftrP26361 1476 aa24.7■■□□□ 1.55
Clstn1-201ENSMUST00000039144 Pcgf6Q99NA9 353 aa24.69■■□□□ 1.54
Clstn1-201ENSMUST00000039144 Thoc2B1AZI6 1594 aaKnown RBP24.68■■□□□ 1.54
Clstn1-201ENSMUST00000039144 Wdr62Q3U3T8 1523 aa24.52■■□□□ 1.52
Clstn1-201ENSMUST00000039144 Trim41Q5NCC3 630 aa24.48■■□□□ 1.51
Clstn1-201ENSMUST00000039144 Ercc6F8VPZ5 1481 aa24.44■■□□□ 1.5
Clstn1-201ENSMUST00000039144 Frmpd1A2AKB4 1549 aa24.41■■□□□ 1.5
Clstn1-201ENSMUST00000039144 Unc13aQ4KUS2 1712 aa24.39■■□□□ 1.5
Clstn1-201ENSMUST00000039144 Top2bQ64511 1612 aa24.31■■□□□ 1.48
Clstn1-201ENSMUST00000039144 Fam135aQ6NS59 1506 aa24.23■■□□□ 1.47
Clstn1-201ENSMUST00000039144 Cc2d2aQ8CFW7 1633 aa24.2■■□□□ 1.47
Clstn1-201ENSMUST00000039144 Golga3P55937 1487 aa24.2■■□□□ 1.46
Clstn1-201ENSMUST00000039144 HrcG5E8J6 738 aa24.2■■□□□ 1.46
Clstn1-201ENSMUST00000039144 Supt5hO55201 1082 aaKnown RBP24.13■■□□□ 1.45
Clstn1-201ENSMUST00000039144 Phldb1Q6PDH0 1371 aaKnown RBP23.99■■□□□ 1.43
Clstn1-201ENSMUST00000039144 Baz1bQ9Z277 1479 aa23.98■■□□□ 1.43
Clstn1-201ENSMUST00000039144 TnnQ80Z71 1560 aa23.97■■□□□ 1.43
Clstn1-201ENSMUST00000039144 Lamc3Q9R0B6 1581 aa23.93■■□□□ 1.42
Clstn1-201ENSMUST00000039144 Esf1Q3V1V3 845 aaKnown RBP23.93■■□□□ 1.42
Clstn1-201ENSMUST00000039144 Dnajc5bQ9CQ94 199 aa23.88■■□□□ 1.41
Clstn1-201ENSMUST00000039144 Zeb1Q64318 1117 aa23.87■■□□□ 1.41
Clstn1-201ENSMUST00000039144 Neurod1Q60867 357 aa23.87■■□□□ 1.41
Clstn1-201ENSMUST00000039144 Fmn1Q05860 1466 aa23.82■■□□□ 1.4
Clstn1-201ENSMUST00000039144 Cngb1E1AZ71 1325 aa23.77■■□□□ 1.4
Clstn1-201ENSMUST00000039144 Rsf1E9PWW9 1441 aaKnown RBP23.75■■□□□ 1.39
Clstn1-201ENSMUST00000039144 Ccdc88bQ4QRL3 1481 aa23.71■■□□□ 1.39
Clstn1-201ENSMUST00000039144 Cep164Q5DU05 1446 aa23.6■■□□□ 1.37
Clstn1-201ENSMUST00000039144 Kif15Q6P9L6 1387 aa23.6■■□□□ 1.37
Clstn1-201ENSMUST00000039144 Top2aQ01320 1528 aaKnown RBP23.6■■□□□ 1.37
Clstn1-201ENSMUST00000039144 Camsap1A2AHC3 1581 aa23.56■■□□□ 1.36
Clstn1-201ENSMUST00000039144 Ubl4bQ9CQ84 188 aa23.54■■□□□ 1.36
Clstn1-201ENSMUST00000039144 Mrc2Q64449 1479 aa23.52■■□□□ 1.36
Clstn1-201ENSMUST00000039144 Chic1Q8CBW7 227 aa23.47■■□□□ 1.35
Clstn1-201ENSMUST00000039144 Cux2P70298 1426 aa23.46■■□□□ 1.35
Clstn1-201ENSMUST00000039144 Gab3Q8BSM5 595 aa23.44■■□□□ 1.34
Clstn1-201ENSMUST00000039144 Ppargc1bQ8VHJ7 1014 aa23.43■■□□□ 1.34
Clstn1-201ENSMUST00000039144 Ccdc18Q640L5 1455 aa23.36■■□□□ 1.33
Clstn1-201ENSMUST00000039144 Kif21aQ9QXL2 1672 aa23.35■■□□□ 1.33
Clstn1-201ENSMUST00000039144 Sall2Q9QX96 1004 aa23.25■■□□□ 1.31
Clstn1-201ENSMUST00000039144 Grin2bQ01097 1482 aa23.24■■□□□ 1.31
Clstn1-201ENSMUST00000039144 1700123L14RikQ3V2K7 440 aa23.2■■□□□ 1.3
Clstn1-201ENSMUST00000039144 NrkQ9R0G8 1455 aa23.18■■□□□ 1.3
Clstn1-201ENSMUST00000039144 Las1lA2BE28 776 aaKnown RBP23.15■■□□□ 1.3
Clstn1-201ENSMUST00000039144 Rapgef2Q8CHG7 1496 aa23.13■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Wdr66E9Q743 1299 aa23.12■■□□□ 1.29
Clstn1-201ENSMUST00000039144 LrpprcQ6PB66 1392 aaKnown RBP23.12■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Gm38655A0A286YDK6 273 aa23.12■■□□□ 1.29
Clstn1-201ENSMUST00000039144 PogzQ8BZH4 1409 aaKnown RBP23.12■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Eif4g1Q6NZJ6 1600 aaKnown RBP23.12■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Csrnp3P59055 597 aa23.11■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Shroom4Q1W617 1475 aa23.1■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Mier1Q5UAK0 511 aa23.1■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Lrriq1Q0P5X1 1673 aa23.09■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Crocc2F6XLV1 1638 aa23.09■■□□□ 1.29
Clstn1-201ENSMUST00000039144 Npm1Q61937 292 aaKnown RBP23.08■■□□□ 1.28
Clstn1-201ENSMUST00000039144 PtprkP35822 1457 aa23.03■■□□□ 1.28
Clstn1-201ENSMUST00000039144 Dhx29Q6PGC1 1365 aaKnown RBP23.02■■□□□ 1.28
Clstn1-201ENSMUST00000039144 Duox2A2AQ99 1517 aa23.01■■□□□ 1.27
Clstn1-201ENSMUST00000039144 NefmP08553 848 aa23■■□□□ 1.27
Clstn1-201ENSMUST00000039144 Efcab5A0JP43 1406 aa22.98■■□□□ 1.27
Clstn1-201ENSMUST00000039144 Il27Q8K3I6 234 aa22.98■■□□□ 1.27
Clstn1-201ENSMUST00000039144 Anks4bQ8K3X6 423 aa22.97■■□□□ 1.27
Clstn1-201ENSMUST00000039144 Samd9lQ69Z37 1561 aa22.97■■□□□ 1.27
Clstn1-201ENSMUST00000039144 Urb2E9Q7L1 1524 aaKnown RBP22.9■■□□□ 1.26
Clstn1-201ENSMUST00000039144 Gpatch8A2A6A1 1505 aa22.87■■□□□ 1.25
Clstn1-201ENSMUST00000039144 Cep162Q6ZQ06 1403 aa22.85■■□□□ 1.25
Clstn1-201ENSMUST00000039144 Map3k1P53349 1493 aa22.85■■□□□ 1.25
Clstn1-201ENSMUST00000039144 Setd1bQ8CFT2 1985 aa22.84■■□□□ 1.25
Clstn1-201ENSMUST00000039144 Plb1Q3TTY0 1478 aa22.84■■□□□ 1.25
Clstn1-201ENSMUST00000039144 Pbrm1Q8BSQ9 1634 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms