RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Glipr1l2Q9CQ35 332 aa20.37■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Chmp7Q8R1T1 451 aa20.36■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Prkrip1Q9CWV6 186 aaKnown RBP20.36■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Swt1Q9DBQ9 907 aa20.35■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Ccdc47Q9D024 483 aaKnown RBP20.35■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Znf710Q3U288 666 aa20.35■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Ric3Q8BPM6 367 aa20.35■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Becn1O88597 448 aa20.34■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Kiaa0754Q69ZZ9 979 aa20.34■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Nap1l3Q794H2 544 aa20.34■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Tceal9Q9DD24 104 aa20.34■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Atp2b2Q9R0K7 1198 aa20.33■□□□□ 0.85
Ubfd1-201ENSMUST00000033158 Pank1Q8K4K6 548 aa20.33■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Gpatch11Q3UFS4 262 aa20.32■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 PnisrA2AJT4 805 aaKnown RBP20.32■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Rbm25B2RY56 838 aaKnown RBP20.32■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Tpd52l1O54818 204 aa20.32■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 FanciQ8K368 1330 aa20.31■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Fyb1O35601 819 aa20.31■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 VgfQ0VGU4 617 aa20.31■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Rabep1O35551 862 aa20.31■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Sh3bgrQ9WUZ7 214 aa20.31■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Trim30aP15533 496 aa20.3■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Q7TT23 1179 aa20.3■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 NrkQ9R0G8 1455 aa20.3■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 KinQ8K339 391 aa20.3■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Q9D9H8 365 aa20.3■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Cplx2P84086 134 aa20.29■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Cd109Q8R422 1442 aa20.29■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Duox2A2AQ99 1517 aa20.29■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Slc4a2P13808 1237 aaKnown RBP20.29■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Q9D2X8 372 aa20.29■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Gprasp1Q5U4C1 1347 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Plekhh1Q80TI1 1356 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Gsdma3Q5Y4Y6 464 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 KarsQ99MN1 595 aaKnown RBP20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Map3k5O35099 1380 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Cetn4Q8K4K1 168 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Arhgap31A6X8Z5 1425 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Nectin2P32507 530 aa20.28■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Mical1Q8VDP3 1048 aa20.27■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Urb2E9Q7L1 1524 aaKnown RBP20.27■□□□□ 0.84
Ubfd1-201ENSMUST00000033158 Ppp2r1aQ76MZ3 589 aa20.27■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Ush1cQ9ES64 910 aa20.26■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Phactr2B1AVP0 632 aa20.26■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Tpm3P21107 285 aaKnown RBP20.25■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Rnf20Q5DTM8 973 aa20.25■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Arhgef5E9Q7D5 1581 aa20.24■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Arap1Q4LDD4 1452 aa20.24■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Gm21969J3QJZ1 289 aa20.24■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Myom3A2ABU4 1439 aa20.24■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Ttll5Q8CHB8 1328 aa20.24■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Ccdc183A2AJB1 534 aa20.23■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Ttll13A4Q9F6 804 aa20.23■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Cfdp1O88271 295 aaKnown RBP20.23■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Ddx11Q6AXC6 880 aa20.23■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Nutm1Q8BHP2 1126 aa20.22■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Q8C5K5 320 aa20.22■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Zfp444Q3TDV8 331 aaKnown RBP20.22■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Srek1Q8BZX4 494 aaKnown RBP20.22■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Rab3gap2Q8BMG7 1366 aa20.22■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Sv2bQ8BG39 683 aa20.21■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Gtf3c3Q3TMP1 882 aa20.21■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 TatQ8QZR1 454 aa20.21■□□□□ 0.83
Ubfd1-201ENSMUST00000033158 Evc2Q8K1G2 1220 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Ncapd3Q6ZQK0 1506 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Cavin4A2AMM0 362 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Erc2Q6PH08 957 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Gm7298A0A0N4SVU1 1476 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Cc2d2aQ8CFW7 1633 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Map3k1P53349 1493 aa20.2■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Ccdc171E9Q1U1 1324 aa20.19■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Utp3Q9JI13 469 aaKnown RBP20.19■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Neurod6P48986 337 aa20.19■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Smc3Q9CW03 1217 aaKnown RBP20.18■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Arhgap5P97393 1501 aa20.18■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 PhaxQ9JJT9 385 aaKnown RBP20.18■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Nek4Q9Z1J2 792 aa20.18■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Fam163aQ8CAA5 168 aa20.17■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Gripap1Q8VD04 806 aa20.17■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 SkilQ60665 675 aa20.17■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Apaf1O88879 1249 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 BccipQ9CWI3 316 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Hmox1P14901 289 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Bicd2Q921C5 820 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Kif4P33174 1231 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 PogzQ8BZH4 1409 aaKnown RBP20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Plekhg5Q66T02 1073 aa20.16■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Cplx1P63040 134 aa20.15■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Krt82Q99M74 516 aa20.15■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Dhx9O70133 1380 aaKnown RBP20.15■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Mcm2P97310 904 aa20.15■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Cyp46a1Q9WVK8 500 aa20.14■□□□□ 0.82
Ubfd1-201ENSMUST00000033158 Grin2bQ01097 1482 aa20.14■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Fgd6Q69ZL1 1399 aa20.13■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Polr3gQ6NXY9 223 aa20.13■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Mroh2bQ7M6Y6 1581 aa20.13■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Tpm1P58771 284 aa20.13■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 NexnQ7TPW1 607 aa20.13■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Ppp2r3aB2RXC8 1150 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms