RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Apaf1O88879 1249 aa12.02□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Mre11Q61216 706 aa12.02□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Dnttip2Q8R2M2 758 aaKnown RBP12.02□□□□□ -0.49
Col6a1-201ENSMUST00000001147 U2surpQ6NV83 1029 aaKnown RBP12.02□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Erbb3Q61526 1339 aa12.02□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Ccar1Q8CH18 1146 aaKnown RBP12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Nsd2Q8BVE8 1365 aa12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Cdk13Q69ZA1 1511 aaKnown RBP12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Puf60Q3UEB3 564 aaKnown RBP12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 ErbinQ80TH2 1402 aa12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Trim58Q5NCC9 485 aa12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 NgefQ8CHT1 710 aa12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Stard8Q8K031 1019 aa12.01□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Ccdc183A2AJB1 534 aa12□□□□□ -0.49
Col6a1-201ENSMUST00000001147 GorabQ8BRM2 368 aa12□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Rapgef6Q5NCJ1 1609 aa11.99□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Ccdc60Q8C4J0 545 aa11.99□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Naip6Q9JIB6 1403 aa11.99□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Unc13aQ4KUS2 1712 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Mlh3A0A1Y7VMP7 1443 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Kdm3bQ6ZPY7 1562 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Taok2Q6ZQ29 1240 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Mink1Q9JM52 1308 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Trim44Q9QXA7 346 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Adcy10Q8C0T9 1614 aa11.98□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Prex2Q3LAC4 1598 aa11.97□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Shroom2A2ALU4 1481 aa11.97□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Atp7aQ64430 1491 aa11.97□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Nutm1Q8BHP2 1126 aa11.96□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Atxn3Q9CVD2 355 aa11.96□□□□□ -0.49
Col6a1-201ENSMUST00000001147 KnstrnQ9D9Z1 312 aaKnown RBP11.96□□□□□ -0.49
Col6a1-201ENSMUST00000001147 RalgapbQ8BQZ4 1484 aa11.96□□□□□ -0.49
Col6a1-201ENSMUST00000001147 Kif21aQ9QXL2 1672 aa11.96□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Utp14aQ640M1 767 aaKnown RBP11.96□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Trappc8E9PWG2 1437 aa11.96□□□□□ -0.5
Col6a1-201ENSMUST00000001147 CenpjQ569L8 1344 aa11.95□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Fgd6Q69ZL1 1399 aa11.95□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Arhgef12Q8R4H2 1543 aaKnown RBP11.95□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Nectin2P32507 530 aa11.94□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Shq1Q7TMX5 569 aa11.94□□□□□ -0.5
Col6a1-201ENSMUST00000001147 AlkP97793 1621 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Pprc1Q6NZN1 1644 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Abca5Q8K448 1642 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Pibf1E9Q6K3 756 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Safb2Q80YR5 991 aaKnown RBP11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Fam135aQ6NS59 1506 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Caskin1Q6P9K8 1431 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Ylpm1Q9R0I7 1386 aaKnown RBP11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Gm14025A2AP89 1413 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Ssh2Q5SW75 1423 aa11.93□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Rfx1P48377 963 aa11.92□□□□□ -0.5
Col6a1-201ENSMUST00000001147 G3bp1P97855 465 aaKnown RBP11.92□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Smc5Q8CG46 1101 aaKnown RBP11.92□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Tnpo1Q8BFY9 898 aaKnown RBP11.91□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Kdm6bQ5NCY0 1641 aa11.91□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Gcc2Q8CHG3 1679 aa11.91□□□□□ -0.5
Col6a1-201ENSMUST00000001147 PtmaP26350 111 aa11.91□□□□□ -0.5
Col6a1-201ENSMUST00000001147 DroshaQ5HZJ0 1373 aaKnown RBP11.91□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Zmym4A2A791 1549 aaKnown RBP11.9□□□□□ -0.5
Col6a1-201ENSMUST00000001147 Ccdc146E9Q9F7 977 aa11.89□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Cpsf1Q9EPU4 1441 aaKnown RBP11.89□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Ppp2r3aB2RXC8 1150 aa11.88□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Gas2l2Q5SSG4 860 aa11.88□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Ipo4Q8VI75 1082 aa11.88□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Dusp27Q148W8 1138 aa11.88□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Ttc21bQ0HA38 1315 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Rbm25B2RY56 838 aaKnown RBP11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Lmod3E9QA62 571 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Rabep1O35551 862 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 SlkO54988 1233 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 SphkapQ6NSW3 1687 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Cul7Q8VE73 1689 aa11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Chmp4bQ9D8B3 224 aaKnown RBP11.87□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Rtn4Q99P72 1162 aaKnown RBP11.86□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Fancd2Q80V62 1450 aa11.85□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Q9D9H8 365 aa11.85□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Cald1E9QA15 768 aaKnown RBP11.85□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Adamts12Q811B3 1600 aa11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Zranb1Q7M760 708 aa11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Ppp1r18Q8BQ30 594 aa11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Atl3Q91YH5 541 aa11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Nup160Q9Z0W3 1402 aaKnown RBP11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Hsp90b1P08113 802 aaKnown RBP11.84□□□□□ -0.51
Col6a1-201ENSMUST00000001147 Arhgef11Q68FM7 1552 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Txndc2Q6P902 515 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 HnrnpuQ8VEK3 800 aaKnown RBP11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Atp2b2Q9R0K7 1198 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Nkx1-2P42580 305 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Stk11ipQ3TAA7 1072 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Cc2d1aQ8K1A6 943 aa11.83□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Sox12Q04890 314 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Uspl1Q3ULM6 1089 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Pdcl3Q8BVF2 240 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 PtprgQ05909 1442 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Tnnt1O88346 262 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Psme1P97371 249 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Fhod3Q76LL6 1578 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Gsto1O09131 240 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Erich6bQ9D4S6 220 aa11.82□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Cog6Q8R3I3 657 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms